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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:296278..297532+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010589-T1 ID=CBS51388_010589-T1|Name=CBS51388_010589-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1255bp|location=Sequence derived from alignment at An17:296278..297532+ (Aspergillus niger CBS 513.88)
ATGGCTGCCAGTGAACCCTCCAGATACCTGGCAAGGTCATTGCCACGGGC
CTTGGTGCCCTCTTCGCGGGCTCCGGCCTTTTGCTGGCGTCGCAATGCCT
CCGATCAAGCGTCGACGAGATCTCCGTCCGCCGACATCAACGAGCTGGAG
TCGACCACTCTATCCACCCCTCTGTCGCAGGACACGGTGAAGTCCTTCAA
TCCTCTCGAAAGAGCCAGAGCACGCAAGACGCAACTACCCCGGAGTCGGT
ACGTTTTCTCCTGGAGTCAAACCCTAGGCTTCACTTCAACATCCTCCATC
CGACAATCATCCGTCCTCCCCAACTGACACGAAACAACCAGTTATCAATT
CCGCTCCCCCAAATACGACCGTGGTCCTCTTCACCCTCACCGGCCTCCCC
CGCCCTCTGATCCCTCCTCTCGACTTTTCGTCCCCGGCCCCTTCTCCCTT
CCCCGTGTCGCACAGACCTGGCAATCAACCGTCGCACCGGACCTCCTCAC
CCTCCTCTACGTCCACAACCCCCCGGGATTTAAGCCCCCGCCGAAGGCTC
CTCGTCTCCGTTCATGGGACGACAGCTCCCCGTACCACAAGAACCGATCT
CTGCGTGGCCCTCGTGGTGGTGACGTTCTCCGCCTCCTCCGCAAGCCTAT
CACCTTCAACAACATCCCCAAGATCGAGCGCATCACTCTCCACAGTTACG
TCAAGCAGGCTGCCACGAACGACTCGTCATGGCTGCACGTTGCTGGTATG
GCCCTGCAAGCCGTGACCAACGTCAAGGTTGAGACTTTCAAGTCCAAGAC
TAGCGTTGCCCAGTGGCACATTGCCCCCGGTCGTGATACCGTTGCCGCTA
AGGCCGAGCTGCGCGGTGAGAACATGCTGCATTTCTTCGGAAAGCTGGTC
GATGTTGTCATGCCCAGACTCAAGGATTGGCAGGGTGTGAAGGGTAGCAG
TGGTGATAGCAGTGGTAACATCACTTTCGGTCTTGAACCTGAGGAGATGG
CTCTGTTCCCGGAGATTGAGGTGAACTATGATATGTAAGTTGCCCCATTG
CCAAGTGTACAACGCTTTACGTGCACATACATGTGCACACAGTGCCAAGT
ATGATCAGAAGATCTAATCGAAATAAAACAGGTACCCCCCCAAAATGATC
CCCGGTTGCCACATCACCATCCACACCAGCGCCAACACCGACAAGGACGC
CCGTCTTCTGCTCAGCGCCATGGGTGTTCCTTTCTACGGCAAGCTTGTCA
ACTGA back to topCoding sequence (CDS) from alignment at An17:296278..297532+ >CBS51388_010589-T1 ID=CBS51388_010589-T1|Name=CBS51388_010589-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3195bp|location=Sequence derived from alignment at An17:296278..297532+ (Aspergillus niger CBS 513.88)
ATGGCTGCCAGTGAACCCTCCAGATACCTGGCAAGGTCATTGCCACGGGC
CTTGGTGCCCTCTTCGCGGGCTCCGGCCTTTTGCTGGCGTCGCAATGCCT
CCGATCAAGCGTCGACGAGATCTCCGTCCGCCGACATCAACGAGCTGGAG
TCGACCACTCTATCCACCCCTCTGTCGCAGGACACGGTGAAGTCCTTCAA
TCCTCTCGAAAGAGCCAGAGCACGCAAGACGCAACTACCCCGGAGTCGTT
ATCAATTCCGCTCCCCCAAATACGACCGTGGTCCTCTTCACCCTCACCGG
CCTCCCCCGCCCTCTGATCCCTCCTCTCGACTTTTCGTCCCCGGCCCCTT
CTCCCTTCCCCGTGTCGCACAGACCTGGCAATCAACCGTCGCACCGGACC
TCCTCACCCTCCTCTACGTCCACAACCCCCCGGGATTTAAGCCCCCGCCG
AAGGCTCCTCGTCTCCGTTCATGGGACGACAGCTCCCCGTACCACAAGAA
CCGATCTCTGCGTGGCCCTCGTGGTGGTGACGTTCTCCGCCTCCTCCGCA
AGCCTATCACCTTCAACAACATCCCCAAGATCGAGCGCATCACTCTCCAC
AGTTACGTCAAGCAGGCTGCCACGAACGACTCGTCATGGCTGCACGTTGC
TGGTATGGCCCTGCAAGCCGTGACCAACGTCAAGGTTGAGACTTTCAAGT
CCAAGACTAGCGTTGCCCAGTGGCACATTGCCCCCGGTCGTGATACCGTT
GCCGCTAAGGCCGAGCTGCGCGGTGAGAACATGCTGCATTTCTTCGGAAA
GCTGGTCGATGTTGTCATGCCCAGACTCAAGGATTGGCAGGGTGTGAAGG
GTAGCAGTGGTGATAGCAGTGGTAACATCACTTTCGGTCTTGAACCTGAG
GAGATGGCTCTGTTCCCGGAGATTGAGGTGAACTATGATATGTACCCCCC
CAAAATGATCCCCGGTTGCCACATCACCATCCACACCAGCGCCAACACCG
ACAAGGACGCCCGTCTTCTGCTCAGCGCCATGGGTGTTCCTTTCTACGGC
AAGCTTGTCAACTGAATGGCTGCCAGTGAACCCTCCAGATACCTGGCAAG
GTCATTGCCACGGGCCTTGGTGCCCTCTTCGCGGGCTCCGGCCTTTTGCT
GGCGTCGCAATGCCTCCGATCAAGCGTCGACGAGATCTCCGTCCGCCGAC
ATCAACGAGCTGGAGTCGACCACTCTATCCACCCCTCTGTCGCAGGACAC
GGTGAAGTCCTTCAATCCTCTCGAAAGAGCCAGAGCACGCAAGACGCAAC
TACCCCGGAGTCGTTATCAATTCCGCTCCCCCAAATACGACCGTGGTCCT
CTTCACCCTCACCGGCCTCCCCCGCCCTCTGATCCCTCCTCTCGACTTTT
CGTCCCCGGCCCCTTCTCCCTTCCCCGTGTCGCACAGACCTGGCAATCAA
CCGTCGCACCGGACCTCCTCACCCTCCTCTACGTCCACAACCCCCCGGGA
TTTAAGCCCCCGCCGAAGGCTCCTCGTCTCCGTTCATGGGACGACAGCTC
CCCGTACCACAAGAACCGATCTCTGCGTGGCCCTCGTGGTGGTGACGTTC
TCCGCCTCCTCCGCAAGCCTATCACCTTCAACAACATCCCCAAGATCGAG
CGCATCACTCTCCACAGTTACGTCAAGCAGGCTGCCACGAACGACTCGTC
ATGGCTGCACGTTGCTGGTATGGCCCTGCAAGCCGTGACCAACGTCAAGG
TTGAGACTTTCAAGTCCAAGACTAGCGTTGCCCAGTGGCACATTGCCCCC
GGTCGTGATACCGTTGCCGCTAAGGCCGAGCTGCGCGGTGAGAACATGCT
GCATTTCTTCGGAAAGCTGGTCGATGTTGTCATGCCCAGACTCAAGGATT
GGCAGGGTGTGAAGGGTAGCAGTGGTGATAGCAGTGGTAACATCACTTTC
GGTCTTGAACCTGAGGAGATGGCTCTGTTCCCGGAGATTGAGGTGAACTA
TGATATGTACCCCCCCAAAATGATCCCCGGTTGCCACATCACCATCCACA
CCAGCGCCAACACCGACAAGGACGCCCGTCTTCTGCTCAGCGCCATGGGT
GTTCCTTTCTACGGCAAGCTTGTCAACTGAATGGCTGCCAGTGAACCCTC
CAGATACCTGGCAAGGTCATTGCCACGGGCCTTGGTGCCCTCTTCGCGGG
CTCCGGCCTTTTGCTGGCGTCGCAATGCCTCCGATCAAGCGTCGACGAGA
TCTCCGTCCGCCGACATCAACGAGCTGGAGTCGACCACTCTATCCACCCC
TCTGTCGCAGGACACGGTGAAGTCCTTCAATCCTCTCGAAAGAGCCAGAG
CACGCAAGACGCAACTACCCCGGAGTCGTTATCAATTCCGCTCCCCCAAA
TACGACCGTGGTCCTCTTCACCCTCACCGGCCTCCCCCGCCCTCTGATCC
CTCCTCTCGACTTTTCGTCCCCGGCCCCTTCTCCCTTCCCCGTGTCGCAC
AGACCTGGCAATCAACCGTCGCACCGGACCTCCTCACCCTCCTCTACGTC
CACAACCCCCCGGGATTTAAGCCCCCGCCGAAGGCTCCTCGTCTCCGTTC
ATGGGACGACAGCTCCCCGTACCACAAGAACCGATCTCTGCGTGGCCCTC
GTGGTGGTGACGTTCTCCGCCTCCTCCGCAAGCCTATCACCTTCAACAAC
ATCCCCAAGATCGAGCGCATCACTCTCCACAGTTACGTCAAGCAGGCTGC
CACGAACGACTCGTCATGGCTGCACGTTGCTGGTATGGCCCTGCAAGCCG
TGACCAACGTCAAGGTTGAGACTTTCAAGTCCAAGACTAGCGTTGCCCAG
TGGCACATTGCCCCCGGTCGTGATACCGTTGCCGCTAAGGCCGAGCTGCG
CGGTGAGAACATGCTGCATTTCTTCGGAAAGCTGGTCGATGTTGTCATGC
CCAGACTCAAGGATTGGCAGGGTGTGAAGGGTAGCAGTGGTGATAGCAGT
GGTAACATCACTTTCGGTCTTGAACCTGAGGAGATGGCTCTGTTCCCGGA
GATTGAGGTGAACTATGATATGTACCCCCCCAAAATGATCCCCGGTTGCC
ACATCACCATCCACACCAGCGCCAACACCGACAAGGACGCCCGTCTTCTG
CTCAGCGCCATGGGTGTTCCTTTCTACGGCAAGCTTGTCAACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264K2W |
| DBxref | InterPro:IPR031309 |
| DBxref | InterPro:IPR022803 |
| DBxref | PFAM:PF00673 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:296278..297532 + |
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