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CBS51388_010616-T1, CBS51388_010616-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010616-T1
Unique NameCBS51388_010616-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:390314..392094-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010616-T1 ID=CBS51388_010616-T1|Name=CBS51388_010616-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1781bp|location=Sequence derived from alignment at An17:390314..392094- (Aspergillus niger CBS 513.88)
ATGGCGACCGCTACCATGACTATGCCGCCACCCCCCAAGGCTAAGAAAAA
TGCCAAACTTCCCCCGGAGAATGAACGTTTCATGAGAGCTTGCTCCGATA
TTGCGAATGCCCTGATCCAAGAATATGAAGCGCAACGCGATCCCAAGAAA
CCCAAGAGAGATATCAACCTCAACAAACTGCGGGGTCAAGTAGCCAAAAA
GCATGCCCTGGCTACACAACCCCCATTGACGGCCATTATCGCGGCCGTCC
CTGAGCACTACAAGAAATACATCCTTCCCAAGTTGATTGCGAAGCCCATC
AGTATGTCTGCGCCTTGTCTCCCTGCGCGTAACCTTTCTAACACACTCTG
CCAGGAACCTCGTCCGGTATCGCGGTTGTCGCGGTCATGAGCAAACCCCA
TCGTTGTCCCCATATTGCCTACACCGGAAACATCTGCGTCTACTGCCCTG
GTGGCCCTGATTCCGACTTTGAGTACTCTACACAGTCCTATACCGGATAC
GAGCCGACCTCGATGCGTGCGATCCGCGCCCGGTACGATCCGTTTGAGCA
GGCCCGAGGACGTGTGGACCAGATCAAGTCTCTGGGTCACAGCGTGGACA
AGGTGGAGTACATCATCATGGGTGGAACGTTCATGTCTCTGCCGGAGGAC
TACCGTGAGTCGTTCGTGGCTCAGCTGCACAACGCGCTCAGTGGATATCA
AACGGACAATGTCGACGAAGCGGTACAGGCTGGTGAGATGAGTAACGTGA
AGTGCGTGGGTATCACAATCGAAACAAGACCGGACTATTGTCTCGACCAA
CATTTGAGCAGTATGCTCCGCTACGGATGTACTAGATTGGAGATCGGTGT
CCAGAGTTTGTATGAGGATGTCGCCAGAGACACGAACAGAGGTCACACTG
TCGCGGCTGTCGCAGAAACATTCAAGCTTGCAAAGGATGCCGGCTTCAAG
GTCGTCAGTCATATGATGCCGGATCTGCCCAACGTGGGCATGGAGCGTGA
CCTGTTCCAGTTCCAGGAGTACTTCGAGAACCCGGCTTTCCGAACGGATG
GTCTGAAGATCTACCCCACGCTGGTCATCCGTGGAACTGGTCTGTACGAG
CTATGGAGGACGGGTCGCTACAAGAACTACACGCCAAACGCCCTGATCGA
CCTGGTCGCCCGCATCCTCGCTCTGGTGCCCCCGTGGACGCGTATCTACC
GAGTCCAGCGTGATATCCCCATGCCCCTGGTGACCTCGGGAGTTGAGAAC
GGCAACTTGCGCGAACTGGCCTTGGCACGCATGAAGGACTTCGGAACTAC
TTGCCGCGACGTACGGACCCGTGAAGTCGGTATCAACGAAGTTAAGAACA
AGATTCGCCCATCCCAAGTCGAACTGATCCGCCGTGACTACACAGCAAAC
GGAGGCTGGGAGACATTCCTCGCCTACGAGGACCCCAAGCAAGATATCCT
GATCGGTCTGCTGCGTCTGCGCAAGTGCAGCCCAACCCACACCTTCCGGC
CCGAGTTTACCGGTCAGCAGACCAGTATCGTGCGCGAGCTGCACGTGTAC
GGATCCGCCGTTCCTCTCCACGGACGTGACCCGCGCAAGTTCCAACACCG
CGGATTCGGAACTCTGCTCATGGAAGAGGCAGAGCGGATTGCCCGCGAGG
AGCACGGCAGCACGAAGATCAGTGTTATCTCTGGTGTCGGTGTGCGCAGC
TACTACGCTCGTCTGGGATACACTCTCGACGGACCGTACATGTCCAAGAT
GCTCGACCCGATTGAAGACGAGGAGTTTTAA
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Coding sequence (CDS) from alignment at An17:390314..392094-

>CBS51388_010616-T1 ID=CBS51388_010616-T1|Name=CBS51388_010616-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3456bp|location=Sequence derived from alignment at An17:390314..392094- (Aspergillus niger CBS 513.88)
GAACCTCGTCCGGTATCGCGGTTGTCGCGGTCATGAGCAAACCCCATCGT
TGTCCCCATATTGCCTACACCGGAAACATCTGCGTCTACTGCCCTGGTGG
CCCTGATTCCGACTTTGAGTACTCTACACAGTCCTATACCGGATACGAGC
CGACCTCGATGCGTGCGATCCGCGCCCGGTACGATCCGTTTGAGCAGGCC
CGAGGACGTGTGGACCAGATCAAGTCTCTGGGTCACAGCGTGGACAAGGT
GGAGTACATCATCATGGGTGGAACGTTCATGTCTCTGCCGGAGGACTACC
GTGAGTCGTTCGTGGCTCAGCTGCACAACGCGCTCAGTGGATATCAAACG
GACAATGTCGACGAAGCGGTACAGGCTGGTGAGATGAGTAACGTGAAGTG
CGTGGGTATCACAATCGAAACAAGACCGGACTATTGTCTCGACCAACATT
TGAGCAGTATGCTCCGCTACGGATGTACTAGATTGGAGATCGGTGTCCAG
AGTTTGTATGAGGATGTCGCCAGAGACACGAACAGAGGTCACACTGTCGC
GGCTGTCGCAGAAACATTCAAGCTTGCAAAGGATGCCGGCTTCAAGGTCG
TCAGTCATATGATGCCGGATCTGCCCAACGTGGGCATGGAGCGTGACCTG
TTCCAGTTCCAGGAGTACTTCGAGAACCCGGCTTTCCGAACGGATGGTCT
GAAGATCTACCCCACGCTGGTCATCCGTGGAACTGGTCTGTACGAGCTAT
GGAGGACGGGTCGCTACAAGAACTACACGCCAAACGCCCTGATCGACCTG
GTCGCCCGCATCCTCGCTCTGGTGCCCCCGTGGACGCGTATCTACCGAGT
CCAGCGTGATATCCCCATGCCCCTGGTGACCTCGGGAGTTGAGAACGGCA
ACTTGCGCGAACTGGCCTTGGCACGCATGAAGGACTTCGGAACTACTTGC
CGCGACGTACGGACCCGTGAAGTCGGTATCAACGAAGTTAAGAACAAGAT
TCGCCCATCCCAAGTCGAACTGATCCGCCGTGACTACACAGCAAACGGAG
GCTGGGAGACATTCCTCGCCTACGAGGACCCCAAGCAAGATATCCTGATC
GGTCTGCTGCGTCTGCGCAAGTGCAGCCCAACCCACACCTTCCGGCCCGA
GTTTACCGGTCAGCAGACCAGTATCGTGCGCGAGCTGCACGTGTACGGAT
CCGCCGTTCCTCTCCACGGACGTGACCCGCGCAAGTTCCAACACCGCGGA
TTCGGAACTCTGCTCATGGAAGAGGCAGAGCGGATTGCCCGCGAGGAGCA
CGGCAGCACGAAGATCAGTGTTATCTCTGGTGTCGGTGTGCGCAGCTACT
ACGCTCGTCTGGGATACACTCTCGACGGACCGTACATGTCCAAGATGCTC
GACCCGATTGAAGACGAGGAGTTTTAAATGGCGACCGCTACCATGACTAT
GCCGCCACCCCCCAAGGCTAAGAAAAATGCCAAACTTCCCCCGGAGAATG
AACGTTTCATGAGAGCTTGCTCCGATATTGCGAATGCCCTGATCCAAGAA
TATGAAGCGCAACGCGATCCCAAGAAACCCAAGAGAGATATCAACCTCAA
CAAACTGCGGGGTCAAGTAGCCAAAAAGCATGCCCTGGCTACACAACCCC
CATTGACGGCCATTATCGCGGCCGTCCCTGAGCACTACAAGAAATACATC
CTTCCCAAGTTGATTGCGAAGCCCATCAGAACCTCGTCCGGTATCGCGGT
TGTCGCGGTCATGAGCAAACCCCATCGTTGTCCCCATATTGCCTACACCG
GAAACATCTGCGTCTACTGCCCTGGTGGCCCTGATTCCGACTTTGAGTAC
TCTACACAGTCCTATACCGGATACGAGCCGACCTCGATGCGTGCGATCCG
CGCCCGGTACGATCCGTTTGAGCAGGCCCGAGGACGTGTGGACCAGATCA
AGTCTCTGGGTCACAGCGTGGACAAGGTGGAGTACATCATCATGGGTGGA
ACGTTCATGTCTCTGCCGGAGGACTACCGTGAGTCGTTCGTGGCTCAGCT
GCACAACGCGCTCAGTGGATATCAAACGGACAATGTCGACGAAGCGGTAC
AGGCTGGTGAGATGAGTAACGTGAAGTGCGTGGGTATCACAATCGAAACA
AGACCGGACTATTGTCTCGACCAACATTTGAGCAGTATGCTCCGCTACGG
ATGTACTAGATTGGAGATCGGTGTCCAGAGTTTGTATGAGGATGTCGCCA
GAGACACGAACAGAGGTCACACTGTCGCGGCTGTCGCAGAAACATTCAAG
CTTGCAAAGGATGCCGGCTTCAAGGTCGTCAGTCATATGATGCCGGATCT
GCCCAACGTGGGCATGGAGCGTGACCTGTTCCAGTTCCAGGAGTACTTCG
AGAACCCGGCTTTCCGAACGGATGGTCTGAAGATCTACCCCACGCTGGTC
ATCCGTGGAACTGGTCTGTACGAGCTATGGAGGACGGGTCGCTACAAGAA
CTACACGCCAAACGCCCTGATCGACCTGGTCGCCCGCATCCTCGCTCTGG
TGCCCCCGTGGACGCGTATCTACCGAGTCCAGCGTGATATCCCCATGCCC
CTGGTGACCTCGGGAGTTGAGAACGGCAACTTGCGCGAACTGGCCTTGGC
ACGCATGAAGGACTTCGGAACTACTTGCCGCGACGTACGGACCCGTGAAG
TCGGTATCAACGAAGTTAAGAACAAGATTCGCCCATCCCAAGTCGAACTG
ATCCGCCGTGACTACACAGCAAACGGAGGCTGGGAGACATTCCTCGCCTA
CGAGGACCCCAAGCAAGATATCCTGATCGGTCTGCTGCGTCTGCGCAAGT
GCAGCCCAACCCACACCTTCCGGCCCGAGTTTACCGGTCAGCAGACCAGT
ATCGTGCGCGAGCTGCACGTGTACGGATCCGCCGTTCCTCTCCACGGACG
TGACCCGCGCAAGTTCCAACACCGCGGATTCGGAACTCTGCTCATGGAAG
AGGCAGAGCGGATTGCCCGCGAGGAGCACGGCAGCACGAAGATCAGTGTT
ATCTCTGGTGTCGGTGTGCGCAGCTACTACGCTCGTCTGGGATACACTCT
CGACGGACCGTACATGTCCAAGATGCTCGACCCGATTGAAGACGAGGAGT
TTTAAATGGCGACCGCTACCATGACTATGCCGCCACCCCCCAAGGCTAAG
AAAAATGCCAAACTTCCCCCGGAGAATGAACGTTTCATGAGAGCTTGCTC
CGATATTGCGAATGCCCTGATCCAAGAATATGAAGCGCAACGCGATCCCA
AGAAACCCAAGAGAGATATCAACCTCAACAAACTGCGGGGTCAAGTAGCC
AAAAAGCATGCCCTGGCTACACAACCCCCATTGACGGCCATTATCGCGGC
CGTCCCTGAGCACTACAAGAAATACATCCTTCCCAAGTTGATTGCGAAGC
CCATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ELP3CBS51388_010616Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010616-T1CBS51388_010616-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010616-T1.cdsCBS51388_010616-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010616-T1.exon2CBS51388_010616-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010616-T1.exon1CBS51388_010616-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09261VI3
DBxrefInterPro:IPR016181
DBxrefInterPro:IPR000182
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR032432
DBxrefInterPro:IPR023404
DBxrefInterPro:IPR034687
DBxrefInterPro:IPR006638
DBxrefPFAM:PF16199
DBxrefPFAM:PF04055
DBxrefPFAM:PF00583
ProductElongator subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:390314..392094 -
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