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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:400210..401999+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010618-T1 ID=CBS51388_010618-T1|Name=CBS51388_010618-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1790bp|location=Sequence derived from alignment at An17:400210..401999+ (Aspergillus niger CBS 513.88)
ATGTCTTCAACCACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGT
ACCACAGGTCATCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTC
CGGAGCCTTCGACCCTAGAGGCTCAGTCATCCGAGAAGCCACCGCATCAT
ATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGC
TGCCATATTTTCTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATG
ATGTCTCGAAAGTAAGTACTTCGGCTCCATGCCATCCTGGACCTGACATG
TTGACGGTACCATGATAGTCCCTCAACATCAGCATGTCGCTCGCAACACT
CACCATCACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTTCTGGG
GTTCCATGTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAACATTC
ATTGTTTACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAACTATGG
TGAGCTCATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCGGCCACCA
TCTCAATCGGTAAGAGCGATCTCACAGCCTAGCATAGCATCTCGCTAACC
AAGATTAGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAG
GTAGCTTGGTGGGTATCTTCGGTGGAGGTTAGAAAACATCCCTTTGCTTG
CTGGATGGTGAAGCTGACAGAACCAAGTTCGCATGCTTGGACAGGGAATC
GGGCCGGTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGATCTAT
CTTTTGGTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCATTCTGG
TGCTTCTTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTGTGAAG
CTCAATGGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAGACGGG
GGTTGTCGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAGCTGGA
AGTCTGTTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTTTCATC
ACCCTGTTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTGACATC
CAGTACCACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCTGGACA
TTGGACTCACTTTCCTAGGCAATGGTAAGTTTTATGATCTCCTCCGACAC
TTTTGGCCTGAATGACCGCTCATGCACTGGTAGGCTTTGGATGTATGTCT
GGCTCTTATCTGGTCGGCTACCTTATGGATTACAACCACCGTCTTACCGA
ACGCGAATATTGCGAGAAACACGGTTATCCGGCAGGCACACGTGTCAATC
TGAAATCACACCCCGACTTCCCCATTGAGGTCGCCCGGATGCGCAATACC
TGGTGGGTGATTGCGATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTC
TTTGCGGACACATCTGGCGGTGCCTATCATTCTGCAGTACTTCATTGCGT
TCTGCTCAACAGGACTCTTCACCATCAACAGCGCCCTGGTCATCGATCTT
TACCCAGGTGCTAGCGCCAGTGCGACAGCAGTGAACAATCTGATGCGGTG
CCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCAACCTATCCTGGACGCCT
TGAAGCCGGATTATACTTTCCTCTTGCTTGCCGGCATCACCCTCGTGATG
ACTCCGTTGCTGTACGTCGAAGATCGATGGGGTCCTGGCTGGCGACATGC
CCGCGAAAGGAGACTCAAGGCCAAAGCCAACGGCAACTAG back to topCoding sequence (CDS) from alignment at An17:400210..401999+ >CBS51388_010618-T1 ID=CBS51388_010618-T1|Name=CBS51388_010618-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7875bp|location=Sequence derived from alignment at An17:400210..401999+ (Aspergillus niger CBS 513.88)
ATGTCTTCAACCACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGT
ACCACAGGTCATCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTC
CGGAGCCTTCGACCCTAGAGGCTCAGTCATCCGAGAAGCCACCGCATCAT
ATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGC
TGCCATATTTTCTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATG
ATGTCTCGAAATCCCTCAACATCAGCATGTCGCTCGCAACACTCACCATC
ACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTTCTGGGGTTCCAT
GTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAACATTCATTGTTT
ACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAACTATGGTGAGCTC
ATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCGGCCACCATCTCAAT
CGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAGCT
TGGTGGGTATCTTCGGTGGAGTTCGCATGCTTGGACAGGGAATCGGGCCG
GTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGATCTATCTTTTG
GTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTC
TTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTGTGAAGCTCAAT
GGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAGACGGGGGTTGT
CGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTG
TTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTG
TTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTGACATCCAGTAC
CACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCTGGACATTGGAC
TCACTTTCCTAGGCAATGGCTTTGGATGTATGTCTGGCTCTTATCTGGTC
GGCTACCTTATGGATTACAACCACCGTCTTACCGAACGCGAATATTGCGA
GAAACACGGTTATCCGGCAGGCACACGTGTCAATCTGAAATCACACCCCG
ACTTCCCCATTGAGGTCGCCCGGATGCGCAATACCTGGTGGGTGATTGCG
ATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTCTTTGCGGACACATCT
GGCGGTGCCTATCATTCTGCAGTACTTCATTGCGTTCTGCTCAACAGGAC
TCTTCACCATCAACAGCGCCCTGGTCATCGATCTTTACCCAGGTGCTAGC
GCCAGTGCGACAGCAGTGAACAATCTGATGCGGTGCCTGCTTGGAGCTGG
CGGTGTGGCTATCGTGCAACCTATCCTGGACGCCTTGAAGCCGGATTATA
CTTTCCTCTTGCTTGCCGGCATCACCCTCGTGATGACTCCGTTGCTGTAC
GTCGAAGATCGATGGGGTCCTGGCTGGCGACATGCCCGCGAAAGGAGACT
CAAGGCCAAAGCCAACGGCAACTAGATGTCTTCAACCACGTCTTCATCAA
GATCAGACCTTGAAAAGGTCCCCGTACCACAGGTCATCCCTAGAGACAGT
GACTCCGATAAGGGATCCCTCTCTCCGGAGCCTTCGACCCTAGAGGCTCA
GTCATCCGAGAAGCCACCGCATCATATCTTCACACGGTCTCGCAAGCTGC
AAATGGTTTGCATCGTCTCCCTCGCTGCCATATTTTCTCCGCTTTCGTCG
AACATTTACTTCCCTGCCCTGGATGATGTCTCGAAATCCCTCAACATCAG
CATGTCGCTCGCAACACTCACCATCACGGTGTACATGATCGTCCAAGGCC
TCGCTCCCAGCTTCTGGGGTTCCATGTCAGACGCCACAGGTAGACGGCCT
GTCTTTATTGGAACATTCATTGTTTACCTCGTAGCCAATATTGCTCTGGC
CGAATCCAAGAACTATGGTGAGCTCATGGCCTTCCGAGCCTTGCAGGCTG
CTGGTAGCGCGGCCACCATCTCAATCGGAGCTGGAGTGATTGGTGATATC
ACAAACTCGGAAGAAAGAGGTAGCTTGGTGGGTATCTTCGGTGGAGTTCG
CATGCTTGGACAGGGAATCGGGCCGGTTTTCGGCGGCATTTTCACCCAGT
ATCTCGGATATCGATCTATCTTTTGGTTCCTCACGATTGCTGGAGGCGTG
AGTCTCCTGTCCATTCTGGTGCTTCTTCCGGAGACATTGAGACCAATTGC
TGGAAATGGAACTGTGAAGCTCAATGGCATTCATAAGCCCTTCATCTACA
CGATCACCGGCCAGACGGGGGTTGTCGAGGGAGCGCAACCGGAAGCGAAA
AAGACCAAAACCAGCTGGAAGTCTGTTTTTGCTCCTTTGACATTCCTCGT
CGAAAAGGACGTTTTCATCACCCTGTTCTTTGGAAGTATCGTGTACACAG
TGTGGAGCATGGTGACATCCAGTACCACCGACCTCTTCAGCGAAGTGTAC
GGCCTGTCATCCCTGGACATTGGACTCACTTTCCTAGGCAATGGCTTTGG
ATGTATGTCTGGCTCTTATCTGGTCGGCTACCTTATGGATTACAACCACC
GTCTTACCGAACGCGAATATTGCGAGAAACACGGTTATCCGGCAGGCACA
CGTGTCAATCTGAAATCACACCCCGACTTCCCCATTGAGGTCGCCCGGAT
GCGCAATACCTGGTGGGTGATTGCGATCTTCATCGTGACAGTTGCTTTGT
ACGGCGTGTCTTTGCGGACACATCTGGCGGTGCCTATCATTCTGCAGTAC
TTCATTGCGTTCTGCTCAACAGGACTCTTCACCATCAACAGCGCCCTGGT
CATCGATCTTTACCCAGGTGCTAGCGCCAGTGCGACAGCAGTGAACAATC
TGATGCGGTGCCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCAACCTATC
CTGGACGCCTTGAAGCCGGATTATACTTTCCTCTTGCTTGCCGGCATCAC
CCTCGTGATGACTCCGTTGCTGTACGTCGAAGATCGATGGGGTCCTGGCT
GGCGACATGCCCGCGAAAGGAGACTCAAGGCCAAAGCCAACGGCAACTAG
ATGTCTTCAACCACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGT
ACCACAGGTCATCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTC
CGGAGCCTTCGACCCTAGAGGCTCAGTCATCCGAGAAGCCACCGCATCAT
ATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGC
TGCCATATTTTCTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATG
ATGTCTCGAAATCCCTCAACATCAGCATGTCGCTCGCAACACTCACCATC
ACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTTCTGGGGTTCCAT
GTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAACATTCATTGTTT
ACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAACTATGGTGAGCTC
ATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCGGCCACCATCTCAAT
CGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAGCT
TGGTGGGTATCTTCGGTGGAGTTCGCATGCTTGGACAGGGAATCGGGCCG
GTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGATCTATCTTTTG
GTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTC
TTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTGTGAAGCTCAAT
GGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAGACGGGGGTTGT
CGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTG
TTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTG
TTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTGACATCCAGTAC
CACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCTGGACATTGGAC
TCACTTTCCTAGGCAATGGCTTTGGATGTATGTCTGGCTCTTATCTGGTC
GGCTACCTTATGGATTACAACCACCGTCTTACCGAACGCGAATATTGCGA
GAAACACGGTTATCCGGCAGGCACACGTGTCAATCTGAAATCACACCCCG
ACTTCCCCATTGAGGTCGCCCGGATGCGCAATACCTGGTGGGTGATTGCG
ATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTCTTTGCGGACACATCT
GGCGGTGCCTATCATTCTGCAGTACTTCATTGCGTTCTGCTCAACAGGAC
TCTTCACCATCAACAGCGCCCTGGTCATCGATCTTTACCCAGGTGCTAGC
GCCAGTGCGACAGCAGTGAACAATCTGATGCGGTGCCTGCTTGGAGCTGG
CGGTGTGGCTATCGTGCAACCTATCCTGGACGCCTTGAAGCCGGATTATA
CTTTCCTCTTGCTTGCCGGCATCACCCTCGTGATGACTCCGTTGCTGTAC
GTCGAAGATCGATGGGGTCCTGGCTGGCGACATGCCCGCGAAAGGAGACT
CAAGGCCAAAGCCAACGGCAACTAGATGTCTTCAACCACGTCTTCATCAA
GATCAGACCTTGAAAAGGTCCCCGTACCACAGGTCATCCCTAGAGACAGT
GACTCCGATAAGGGATCCCTCTCTCCGGAGCCTTCGACCCTAGAGGCTCA
GTCATCCGAGAAGCCACCGCATCATATCTTCACACGGTCTCGCAAGCTGC
AAATGGTTTGCATCGTCTCCCTCGCTGCCATATTTTCTCCGCTTTCGTCG
AACATTTACTTCCCTGCCCTGGATGATGTCTCGAAATCCCTCAACATCAG
CATGTCGCTCGCAACACTCACCATCACGGTGTACATGATCGTCCAAGGCC
TCGCTCCCAGCTTCTGGGGTTCCATGTCAGACGCCACAGGTAGACGGCCT
GTCTTTATTGGAACATTCATTGTTTACCTCGTAGCCAATATTGCTCTGGC
CGAATCCAAGAACTATGGTGAGCTCATGGCCTTCCGAGCCTTGCAGGCTG
CTGGTAGCGCGGCCACCATCTCAATCGGAGCTGGAGTGATTGGTGATATC
ACAAACTCGGAAGAAAGAGGTAGCTTGGTGGGTATCTTCGGTGGAGTTCG
CATGCTTGGACAGGGAATCGGGCCGGTTTTCGGCGGCATTTTCACCCAGT
ATCTCGGATATCGATCTATCTTTTGGTTCCTCACGATTGCTGGAGGCGTG
AGTCTCCTGTCCATTCTGGTGCTTCTTCCGGAGACATTGAGACCAATTGC
TGGAAATGGAACTGTGAAGCTCAATGGCATTCATAAGCCCTTCATCTACA
CGATCACCGGCCAGACGGGGGTTGTCGAGGGAGCGCAACCGGAAGCGAAA
AAGACCAAAACCAGCTGGAAGTCTGTTTTTGCTCCTTTGACATTCCTCGT
CGAAAAGGACGTTTTCATCACCCTGTTCTTTGGAAGTATCGTGTACACAG
TGTGGAGCATGGTGACATCCAGTACCACCGACCTCTTCAGCGAAGTGTAC
GGCCTGTCATCCCTGGACATTGGACTCACTTTCCTAGGCAATGGCTTTGG
ATGTATGTCTGGCTCTTATCTGGTCGGCTACCTTATGGATTACAACCACC
GTCTTACCGAACGCGAATATTGCGAGAAACACGGTTATCCGGCAGGCACA
CGTGTCAATCTGAAATCACACCCCGACTTCCCCATTGAGGTCGCCCGGAT
GCGCAATACCTGGTGGGTGATTGCGATCTTCATCGTGACAGTTGCTTTGT
ACGGCGTGTCTTTGCGGACACATCTGGCGGTGCCTATCATTCTGCAGTAC
TTCATTGCGTTCTGCTCAACAGGACTCTTCACCATCAACAGCGCCCTGGT
CATCGATCTTTACCCAGGTGCTAGCGCCAGTGCGACAGCAGTGAACAATC
TGATGCGGTGCCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCAACCTATC
CTGGACGCCTTGAAGCCGGATTATACTTTCCTCTTGCTTGCCGGCATCAC
CCTCGTGATGACTCCGTTGCTGTACGTCGAAGATCGATGGGGTCCTGGCT
GGCGACATGCCCGCGAAAGGAGACTCAAGGCCAAAGCCAACGGCAACTAG
ATGTCTTCAACCACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGT
ACCACAGGTCATCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTC
CGGAGCCTTCGACCCTAGAGGCTCAGTCATCCGAGAAGCCACCGCATCAT
ATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGC
TGCCATATTTTCTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATG
ATGTCTCGAAATCCCTCAACATCAGCATGTCGCTCGCAACACTCACCATC
ACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTTCTGGGGTTCCAT
GTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAACATTCATTGTTT
ACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAACTATGGTGAGCTC
ATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCGGCCACCATCTCAAT
CGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAGCT
TGGTGGGTATCTTCGGTGGAGTTCGCATGCTTGGACAGGGAATCGGGCCG
GTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGATCTATCTTTTG
GTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTC
TTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTGTGAAGCTCAAT
GGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAGACGGGGGTTGT
CGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTG
TTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTG
TTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTGACATCCAGTAC
CACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCTGGACATTGGAC
TCACTTTCCTAGGCAATGGCTTTGGATGTATGTCTGGCTCTTATCTGGTC
GGCTACCTTATGGATTACAACCACCGTCTTACCGAACGCGAATATTGCGA
GAAACACGGTTATCCGGCAGGCACACGTGTCAATCTGAAATCACACCCCG
ACTTCCCCATTGAGGTCGCCCGGATGCGCAATACCTGGTGGGTGATTGCG
ATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTCTTTGCGGACACATCT
GGCGGTGCCTATCATTCTGCAGTACTTCATTGCGTTCTGCTCAACAGGAC
TCTTCACCATCAACAGCGCCCTGGTCATCGATCTTTACCCAGGTGCTAGC
GCCAGTGCGACAGCAGTGAACAATCTGATGCGGTGCCTGCTTGGAGCTGG
CGGTGTGGCTATCGTGCAACCTATCCTGGACGCCTTGAAGCCGGATTATA
CTTTCCTCTTGCTTGCCGGCATCACCCTCGTGATGACTCCGTTGCTGTAC
GTCGAAGATCGATGGGGTCCTGGCTGGCGACATGCCCGCGAAAGGAGACT
CAAGGCCAAAGCCAACGGCAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:400210..401999 + |
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