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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:449556..450277+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010631-T1 ID=CBS51388_010631-T1|Name=CBS51388_010631-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=722bp|location=Sequence derived from alignment at An17:449556..450277+ (Aspergillus niger CBS 513.88)
ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGGTACCTCCCTCGC
ATCCATCTCTCCCTAGCCATTTCAATTGACGTTGCTAACCACGTCTCTCC
CTTTCTTCTAGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAA
CCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCT
CCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGA
TGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCA
AGCTAGGAGGCGAGGACGACAAGTAAGGACTCCACCCTACAGCGACGAGG
CAACTCAACTGGGAGGACAGTCATTGACCGCTCCGCCACGTTTATAGCTT
CGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGA
CCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGC
GTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACGCT
CTGGCTAGTTTAAACGATAACCTCCTCTACAGCTGTATGCTGACCACCTC
TACTTCTAGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGC
ATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGT
ATGTGCCATCAACGTCTCCTAG back to topCoding sequence (CDS) from alignment at An17:449556..450277+ >CBS51388_010631-T1 ID=CBS51388_010631-T1|Name=CBS51388_010631-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2028bp|location=Sequence derived from alignment at An17:449556..450277+ (Aspergillus niger CBS 513.88)
ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAATGCATCTA
TAATCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCAT
CACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGC
CAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGT
TTTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAACT
TCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCG
ACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCG
CGTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGTGGTCA
AGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAAT
GAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTATGTGCCATCAACGT
CTCCTAGATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGCTGAAT
GCATCTATAATCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGC
AAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAAC
ATTAGGCCAAACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCG
GTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGAC
GACAACTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGA
AACGCCGACCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAA
GCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATAC
GTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGT
GAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTATGTGCCA
TCAACGTCTCCTAGATGGTTGTTTACTCCTTCTATATCTTCGATCGTCAT
GCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAACCTCCATGAC
AGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCGGGTCTCC
CCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATGCCAAGCTC
ATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGCTAGGAGG
CGAGGACGACAACTTCGTTACCTACCGCACTAGCCAATACAAGCTCCATT
ACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGACCTCAAG
AGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTATACGT
CGAATACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCA
TTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTA
TGTGCCATCAACGTCTCCTAGATGGTTGTTTACTCCTTCTATATCTTCGA
TCGTCATGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAACCT
CCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCCG
GGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATGC
CAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAGC
TAGGAGGCGAGGACGACAACTTCGTTACCTACCGCACTAGCCAATACAAG
CTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGA
CCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATC
TATACGTCGAATACGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCA
GGTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTT
TGTGGTATGTGCCATCAACGTCTCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030008 | TRAPP complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR007233 |
| DBxref | PFAM:PF04099 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:449556..450277 + |
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