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CBS51388_010636-T1, CBS51388_010636-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010636-T1
Unique NameCBS51388_010636-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:469636..470748+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010636-T1 ID=CBS51388_010636-T1|Name=CBS51388_010636-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1113bp|location=Sequence derived from alignment at An17:469636..470748+ (Aspergillus niger CBS 513.88)
ATGGAGGCAAAAGATCTCCAGCCGTTGGGCCAAAACGAGCCAATCGTCGA
GCCCGACGAGAGTGAGAATGCGCAGAAGCAACCATGGACCAAGCCTCCTC
CGGACCCCGAGCCCAACTCTCAGTCACATTCAGACTCGGACCAAGCATCC
ATGTATGCAATACCTTTCTTGGTATCTTGCAGTGCCAACCACCAGTGGAG
TTGCTAACCATACATCACCACTAGCAACTCCTACGAAACACACCAGCTCG
ACATCTACGAAGAGAATAACCGTCGCTACCCCAACGATTCATACCACATG
CCCAACGATGAAGCCGAACGAACCCGTCTGAACATTGTCCACCAGATCTA
CCTCATCCTCCTAGATGGCCATCTAACCGCCGCCCCCATTGTCACCAATG
CCCCTCGCATCCTCGACATCGGCACTGGTCCAGGTGACTGGGCCATCGAA
ATGAGCCACGCCTACCCCCACGGCACCATCATCGCCTCTGACATCGGCGT
CTTTGACAACGCCCTTGGCCACGTCGACCTTCCCAACCTCTCCTTCTACC
TCGACGACGCCCGCGACGAATGGGCTTACAACATCCCCTTCGACCTCATC
CACCTCCGCGGCCTCTCCGGCGCCTTCCCCGACTGGTCCTTCATCTACCA
GCAAGCCTTCGAGCACCTCGCTCCCGGCGGTTACCTCGAAGTCGCAGATA
CCGACTTCGCCGCTGAGACCATGACCACCATCCCGCAAAACTCCTACCTC
CGTCTCTTTGCCTCCGCGCTCCGCTCCGCAGACTACTCGGCAGGTTACCT
GCGTGATCTGAGCCATCTTCAGCCTGCACTCTTCCGTGCCCAAGGGTTCA
TCGACATCGACGTCCGCGAGTATACATTCCCCATCGGTCTGTGGCCCGAG
TCGCCGCATGACCGGACCGTCGGCAAAATGGGCCTCATTGCCTTACTAGA
GGGCTTGGAATCGTATAGCTTGCGTGCCCTGACCACTACGTATGGCTGGC
TAGCGGAGGAAGTGCGCGAACTATGTGACCAGGTGCGTGCAGAGATCTTG
GAAGGTGTGTATCGAATTAGTGCGAGGGTGAAGATCGTGACGGGTCGGAA
GCCGTTGACGTGA
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Coding sequence (CDS) from alignment at An17:469636..470748+

>CBS51388_010636-T1 ID=CBS51388_010636-T1|Name=CBS51388_010636-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2082bp|location=Sequence derived from alignment at An17:469636..470748+ (Aspergillus niger CBS 513.88)
ATGGAGGCAAAAGATCTCCAGCCGTTGGGCCAAAACGAGCCAATCGTCGA
GCCCGACGAGAGTGAGAATGCGCAGAAGCAACCATGGACCAAGCCTCCTC
CGGACCCCGAGCCCAACTCTCAGTCACATTCAGACTCGGACCAAGCATCC
ATCAACTCCTACGAAACACACCAGCTCGACATCTACGAAGAGAATAACCG
TCGCTACCCCAACGATTCATACCACATGCCCAACGATGAAGCCGAACGAA
CCCGTCTGAACATTGTCCACCAGATCTACCTCATCCTCCTAGATGGCCAT
CTAACCGCCGCCCCCATTGTCACCAATGCCCCTCGCATCCTCGACATCGG
CACTGGTCCAGGTGACTGGGCCATCGAAATGAGCCACGCCTACCCCCACG
GCACCATCATCGCCTCTGACATCGGCGTCTTTGACAACGCCCTTGGCCAC
GTCGACCTTCCCAACCTCTCCTTCTACCTCGACGACGCCCGCGACGAATG
GGCTTACAACATCCCCTTCGACCTCATCCACCTCCGCGGCCTCTCCGGCG
CCTTCCCCGACTGGTCCTTCATCTACCAGCAAGCCTTCGAGCACCTCGCT
CCCGGCGGTTACCTCGAAGTCGCAGATACCGACTTCGCCGCTGAGACCAT
GACCACCATCCCGCAAAACTCCTACCTCCGTCTCTTTGCCTCCGCGCTCC
GCTCCGCAGACTACTCGGCAGGTTACCTGCGTGATCTGAGCCATCTTCAG
CCTGCACTCTTCCGTGCCCAAGGGTTCATCGACATCGACGTCCGCGAGTA
TACATTCCCCATCGGTCTGTGGCCCGAGTCGCCGCATGACCGGACCGTCG
GCAAAATGGGCCTCATTGCCTTACTAGAGGGCTTGGAATCGTATAGCTTG
CGTGCCCTGACCACTACGTATGGCTGGCTAGCGGAGGAAGTGCGCGAACT
ATGTGACCAGGTGCGTGCAGAGATCTTGGAAGGTGTGTATCGAATTAGTG
CGAGGGTGAAGATCGTGACGGGTCGGAAGCCGTTGACGTGAATGGAGGCA
AAAGATCTCCAGCCGTTGGGCCAAAACGAGCCAATCGTCGAGCCCGACGA
GAGTGAGAATGCGCAGAAGCAACCATGGACCAAGCCTCCTCCGGACCCCG
AGCCCAACTCTCAGTCACATTCAGACTCGGACCAAGCATCCATCAACTCC
TACGAAACACACCAGCTCGACATCTACGAAGAGAATAACCGTCGCTACCC
CAACGATTCATACCACATGCCCAACGATGAAGCCGAACGAACCCGTCTGA
ACATTGTCCACCAGATCTACCTCATCCTCCTAGATGGCCATCTAACCGCC
GCCCCCATTGTCACCAATGCCCCTCGCATCCTCGACATCGGCACTGGTCC
AGGTGACTGGGCCATCGAAATGAGCCACGCCTACCCCCACGGCACCATCA
TCGCCTCTGACATCGGCGTCTTTGACAACGCCCTTGGCCACGTCGACCTT
CCCAACCTCTCCTTCTACCTCGACGACGCCCGCGACGAATGGGCTTACAA
CATCCCCTTCGACCTCATCCACCTCCGCGGCCTCTCCGGCGCCTTCCCCG
ACTGGTCCTTCATCTACCAGCAAGCCTTCGAGCACCTCGCTCCCGGCGGT
TACCTCGAAGTCGCAGATACCGACTTCGCCGCTGAGACCATGACCACCAT
CCCGCAAAACTCCTACCTCCGTCTCTTTGCCTCCGCGCTCCGCTCCGCAG
ACTACTCGGCAGGTTACCTGCGTGATCTGAGCCATCTTCAGCCTGCACTC
TTCCGTGCCCAAGGGTTCATCGACATCGACGTCCGCGAGTATACATTCCC
CATCGGTCTGTGGCCCGAGTCGCCGCATGACCGGACCGTCGGCAAAATGG
GCCTCATTGCCTTACTAGAGGGCTTGGAATCGTATAGCTTGCGTGCCCTG
ACCACTACGTATGGCTGGCTAGCGGAGGAAGTGCGCGAACTATGTGACCA
GGTGCGTGCAGAGATCTTGGAAGGTGTGTATCGAATTAGTGCGAGGGTGA
AGATCGTGACGGGTCGGAAGCCGTTGACGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010636CBS51388_010636Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010636-T1.exon1CBS51388_010636-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010636-T1.exon2CBS51388_010636-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010636-T1.cdsCBS51388_010636-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010636-T1CBS51388_010636-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:469636..470748 +
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