|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:524114..525472+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010652-T1 ID=CBS51388_010652-T1|Name=CBS51388_010652-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1359bp|location=Sequence derived from alignment at An17:524114..525472+ (Aspergillus niger CBS 513.88)
ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGAT
AGACCAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGA
GTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC
TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTC
CGGCACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGGTATGTT
GGCTAAAATCGGAGCACATGATGGGTGTGTGTTGGATGTTCAAAGGCTGA
CCGCTGTTCGATTTTGCCTGCAGTCTCTCGTTTGTATCATCGCTATCCAG
ACCTGTAAATCATGTGGTTTGATCACTTATCGCGACTTCAGCGCGGACGA
GGCCAGAAAGTGTAAGTGCTCTGCCTGCTCGTTAGATCCCCTCGCGCCCT
CGAACTGACGTGCCTTTGATTATCACTAGGGTTCCCCATCACTCTGCTCT
TGATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATT
CCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGG
AGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTT
TCGGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAG
CACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAA
TGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATG
TTTTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGAC
AGTACGTTACTCAGACTAAAAACATTGTGGCTCAAAAGCATCCTTTACTG
ACCTGCTGTTCTCTAGCCATGTTCTACAACAACCTTCTGTCGATTCCCGT
CCTGATCGTTCTGTCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCA
ACCGCAACTTCCCTCCCATGGACCGCAACAGCATCGTTTTCGCCATGATC
CTCTCCGGCTTGTCGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGT
TCGCGTCACTTCTTCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGC
TTCCCATTGCTATCTCTGGACTTATTTTCTTCGATGCCCCTGTTACCTTC
CCCAGCGTTTCGGCTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGC
CGTTGCTAAGATCAAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGA
CCGCCAACCCCCCGGTCAGCGCCAGCAGCCAGAGTATGCGGGACTCGCTG
CGTTCCTAA back to topCoding sequence (CDS) from alignment at An17:524114..525472+ >CBS51388_010652-T1 ID=CBS51388_010652-T1|Name=CBS51388_010652-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4584bp|location=Sequence derived from alignment at An17:524114..525472+ (Aspergillus niger CBS 513.88)
ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGAT
AGACCAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGA
GTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC
TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTC
CGGCACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCG
TTTGTATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTAT
CGCGACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCT
CTTGATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGA
TTCCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTAC
GGAGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTC
TTTCGGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCA
AGCACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTG
AATGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTA
TGTTTTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTG
ACACCATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTG
TCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCC
TCCCATGGACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGT
CGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCT
TCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTAT
CTCTGGACTTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGG
CTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATC
AAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCC
GGTCAGCGCCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGG
CTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGAC
CAGGGCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCC
GCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATT
GTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGC
ACTGACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTG
TATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCG
ACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTG
ATCGGCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCC
CGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAG
AGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTC
GGATTGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCA
CGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATG
CAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTT
TTGGGCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACAC
CATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCG
CTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCC
ATGGACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTC
TGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGA
CCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCT
GGACTTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTAT
CGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGC
AAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTC
AGCGCCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGGCTGA
AGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGG
GCAACAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCG
TCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATTGTGG
ATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTG
ACTTCAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTGTATC
ATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCGACTT
CAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCG
GCATGATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTC
TACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAGAGGT
GCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGAT
TGATGGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCACGCT
GTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATGCAGG
CTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGG
GCATGCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACACCATG
TTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCGCTTT
CTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGG
ACCGCAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTCTGTG
TTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGACCAC
TTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGAC
TTATTTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTATCGTC
GTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGCAAAA
CGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCG
CCAGCAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAAATGGCTGAAGGC
AAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGGGCAA
CAAGAGCTTCGAGGCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCGTCGG
GCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCCTATTGTGGATCC
TCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTGACTT
CAACCTCAACTTTTTCCTCCTCTGCATCCAGTCTCTCGTTTGTATCATCG
CTATCCAGACCTGTAAATCATGTGGTTTGATCACTTATCGCGACTTCAGC
GCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCGGCAT
GATCTACACGGGCTCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTCTACA
CCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGGAGAGGTGCTG
TGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGATTGAT
GGTCCTGAGCTCTATCATTGCCGCCTGGGCTGACATCAAGCACGCTGTCG
AGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAATGCAGGCTAT
ATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGGGCAT
GCGCAAGCGGATCAAGCTGACCAACTTCAAGGACTTTGACACCATGTTCT
ACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCGCTTTCTTG
GAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGGACCG
CAACAGCATCGTTTTCGCCATGATCCTCTCCGGCTTGTCGTCTGTGTTTA
TTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGACCACTTAC
TCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGACTTAT
TTTCTTCGATGCCCCTGTTACCTTCCCCAGCGTTTCGGCTATCGTCGTTG
GCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGCAAAACGCT
AAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCGCCAG
CAGCCAGAGTATGCGGGACTCGCTGCGTTCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000620 |
| DBxref | PFAM:PF00892 |
| Product | GDP-mannose transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:524114..525472 + |
|
