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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:526700..528256+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010653-T1 ID=CBS51388_010653-T1|Name=CBS51388_010653-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1557bp|location=Sequence derived from alignment at An17:526700..528256+ (Aspergillus niger CBS 513.88)
ATGGCATCATTTGCCAAGCTTTCGACTACCACAACTACGAACCCTGCAAA
GCCTAAAGCCGCTCAGAGTGCTCATCACCAACCTGGGTCGGGTAATGCTA
AAAACAGCAACAATGATCGGAAGATGAAGAATTCACAGCAGCAGCAGCAA
CAGCTGCAGAAGAATCAGCGGCCTATTGTGCCTTTTGGGAGAAAGGATCG
GATTTTGTTGGTTGGGGAAGGTGAGTTGGGTTCATCCTTTCTTCCCATTC
TACTTTCATGTGCCCTTCTTCCGGTTCGATCGATGCATGCGTTGCCTTAT
ACATTCTTGATACTTGCTTTTGTGCCTTTCTTTTCCCTTGTCCCCCGGCT
CCCGGAGAGTAAATGCTCATGGTCTGCGGGCCAAGCTCACGTTGGCCTTT
GTCTACATCCTACTTGCTATTCCAGCATCGGGGAAGGGGGGACCTGCCCC
AGAGAACCATGTCATAAAGTTGTCTTGTTGGACCGCAGTCCTAACTAGAT
TGGTGTAGGCGACTTCTCCTTTGCCCGCTCATTAGTCCTCCAGCACCGTT
GCAAGAATGTCATGGCTACCTGCTATGATTCCAAAGACACGCTCCACAGC
AAATACCCCAAAGCTGGAAATAACATCCACGATATACAGTATGCATTTTC
CAAGGCGACGACGGAGGAGCTTGCTTCGGACAGTAAGGAGATTTCTTCCA
TCGGCGGCGATGCAGGAATTGTGGAAACCAATGCACAAGGGTTCCTTGAG
GACCAGGCGCAACGTCGTGGACCCAAAGTCATTTACTCAGTTGACGCTCG
AAAACTCGGTCTTCCTGCGGGTGGCGGTAAAGAAATTCGGACAGGCTTTC
CACGACAGGAGCGAAGACGCCCGGCCTGGAAAGAAGCAAAGAGCGGCGCC
TCATCTGCACCACAAGGTGGGCCGTGGGATGTGATTTGCTTCAACTTCCC
CCATGTCGGCGGTATCTCCACCGACGTCAATCGGCAGGTGCGAGCCAACC
AGGAACTCTTGGTGGCGTTCTTCAAAGCGTGTGTGCCTTTGTTGTCTCAT
CGCCCCGAGCGCGTAGATAGTGATGATGAAGACGACTGGGATAACTGGGA
GGGTTCTGGAGTTGAATCAAGCGGGGGTGAGAACCATCATGATAGCAGTG
GAGACGGCAACCAACTGCGAACAGCCAATACCACGGGGCAGGCGACATGC
CGAAATAGAGTGGAACCAGGTCAAATTCTAGTGTCGATGTTTGAGGGTGA
GCCTTACACCCTTTGGAATATCAAAGACCTTGCAAGGCATGCTGGCTTGC
AAGTGGTCACCAGTTTTCGATTTCCGTGGGCCTCTTATAAGGAGTATTCC
CATGCACGGACGCTGGGCGACATTGAAGGAAAGGACGGTGGAAGAGGCGG
CTGGAGGGGGGAAGATAGGGACGCGAGAATGTACGTCTTTGAAGTCAAAC
ATGAAGACCATCCGGTGATGAGAAGGAACGCCCCATCTTCCAAAGCTGGG
CAGAGTGCGAGAAAGAAGAGGCCAAGAGATGCATCCGACAGCGACGACAG
CGAATAG back to topCoding sequence (CDS) from alignment at An17:526700..528256+ >CBS51388_010653-T1 ID=CBS51388_010653-T1|Name=CBS51388_010653-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2538bp|location=Sequence derived from alignment at An17:526700..528256+ (Aspergillus niger CBS 513.88)
ATGGCATCATTTGCCAAGCTTTCGACTACCACAACTACGAACCCTGCAAA
GCCTAAAGCCGCTCAGAGTGCTCATCACCAACCTGGGTCGGGTAATGCTA
AAAACAGCAACAATGATCGGAAGATGAAGAATTCACAGCAGCAGCAGCAA
CAGCTGCAGAAGAATCAGCGGCCTATTGTGCCTTTTGGGAGAAAGGATCG
GATTTTGTTGGTTGGGGAAGGCGACTTCTCCTTTGCCCGCTCATTAGTCC
TCCAGCACCGTTGCAAGAATGTCATGGCTACCTGCTATGATTCCAAAGAC
ACGCTCCACAGCAAATACCCCAAAGCTGGAAATAACATCCACGATATACA
GTATGCATTTTCCAAGGCGACGACGGAGGAGCTTGCTTCGGACAGTAAGG
AGATTTCTTCCATCGGCGGCGATGCAGGAATTGTGGAAACCAATGCACAA
GGGTTCCTTGAGGACCAGGCGCAACGTCGTGGACCCAAAGTCATTTACTC
AGTTGACGCTCGAAAACTCGGTCTTCCTGCGGGTGGCGGTAAAGAAATTC
GGACAGGCTTTCCACGACAGGAGCGAAGACGCCCGGCCTGGAAAGAAGCA
AAGAGCGGCGCCTCATCTGCACCACAAGGTGGGCCGTGGGATGTGATTTG
CTTCAACTTCCCCCATGTCGGCGGTATCTCCACCGACGTCAATCGGCAGG
TGCGAGCCAACCAGGAACTCTTGGTGGCGTTCTTCAAAGCGTGTGTGCCT
TTGTTGTCTCATCGCCCCGAGCGCGTAGATAGTGATGATGAAGACGACTG
GGATAACTGGGAGGGTTCTGGAGTTGAATCAAGCGGGGGTGAGAACCATC
ATGATAGCAGTGGAGACGGCAACCAACTGCGAACAGCCAATACCACGGGG
CAGGCGACATGCCGAAATAGAGTGGAACCAGGTCAAATTCTAGTGTCGAT
GTTTGAGGGTGAGCCTTACACCCTTTGGAATATCAAAGACCTTGCAAGGC
ATGCTGGCTTGCAAGTGGTCACCAGTTTTCGATTTCCGTGGGCCTCTTAT
AAGGAGTATTCCCATGCACGGACGCTGGGCGACATTGAAGGAAAGGACGG
TGGAAGAGGCGGCTGGAGGGGGGAAGATAGGGACGCGAGAATGTACGTCT
TTGAAGTCAAACATGAAGACCATCCGGTGATGAGAAGGAACGCCCCATCT
TCCAAAGCTGGGCAGAGTGCGAGAAAGAAGAGGCCAAGAGATGCATCCGA
CAGCGACGACAGCGAATAGATGGCATCATTTGCCAAGCTTTCGACTACCA
CAACTACGAACCCTGCAAAGCCTAAAGCCGCTCAGAGTGCTCATCACCAA
CCTGGGTCGGGTAATGCTAAAAACAGCAACAATGATCGGAAGATGAAGAA
TTCACAGCAGCAGCAGCAACAGCTGCAGAAGAATCAGCGGCCTATTGTGC
CTTTTGGGAGAAAGGATCGGATTTTGTTGGTTGGGGAAGGCGACTTCTCC
TTTGCCCGCTCATTAGTCCTCCAGCACCGTTGCAAGAATGTCATGGCTAC
CTGCTATGATTCCAAAGACACGCTCCACAGCAAATACCCCAAAGCTGGAA
ATAACATCCACGATATACAGTATGCATTTTCCAAGGCGACGACGGAGGAG
CTTGCTTCGGACAGTAAGGAGATTTCTTCCATCGGCGGCGATGCAGGAAT
TGTGGAAACCAATGCACAAGGGTTCCTTGAGGACCAGGCGCAACGTCGTG
GACCCAAAGTCATTTACTCAGTTGACGCTCGAAAACTCGGTCTTCCTGCG
GGTGGCGGTAAAGAAATTCGGACAGGCTTTCCACGACAGGAGCGAAGACG
CCCGGCCTGGAAAGAAGCAAAGAGCGGCGCCTCATCTGCACCACAAGGTG
GGCCGTGGGATGTGATTTGCTTCAACTTCCCCCATGTCGGCGGTATCTCC
ACCGACGTCAATCGGCAGGTGCGAGCCAACCAGGAACTCTTGGTGGCGTT
CTTCAAAGCGTGTGTGCCTTTGTTGTCTCATCGCCCCGAGCGCGTAGATA
GTGATGATGAAGACGACTGGGATAACTGGGAGGGTTCTGGAGTTGAATCA
AGCGGGGGTGAGAACCATCATGATAGCAGTGGAGACGGCAACCAACTGCG
AACAGCCAATACCACGGGGCAGGCGACATGCCGAAATAGAGTGGAACCAG
GTCAAATTCTAGTGTCGATGTTTGAGGGTGAGCCTTACACCCTTTGGAAT
ATCAAAGACCTTGCAAGGCATGCTGGCTTGCAAGTGGTCACCAGTTTTCG
ATTTCCGTGGGCCTCTTATAAGGAGTATTCCCATGCACGGACGCTGGGCG
ACATTGAAGGAAAGGACGGTGGAAGAGGCGGCTGGAGGGGGGAAGATAGG
GACGCGAGAATGTACGTCTTTGAAGTCAAACATGAAGACCATCCGGTGAT
GAGAAGGAACGCCCCATCTTCCAAAGCTGGGCAGAGTGCGAGAAAGAAGA
GGCCAAGAGATGCATCCGACAGCGACGACAGCGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263W48 |
| DBxref | InterPro:IPR019446 |
| DBxref | PFAM:PF10354 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:526700..528256 + |
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