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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:566091..567576- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010670-T1 ID=CBS51388_010670-T1|Name=CBS51388_010670-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1486bp|location=Sequence derived from alignment at An17:566091..567576- (Aspergillus niger CBS 513.88)
ATGTCTGAGCCCATCAGGAATAAGAAAGCGGACTTTCCAGTGGCTCCGTA
AGAATCCCTTCTTCGAACTACCAACATCTCAAACGTTTTGGTATGGTATG
CTCTTTGATTTCTGACGAGATATGACGCTTGCAGGACACCACAAAATACC
CCGGCCAACAATGCTCCTATTTCTTCTCATGCCCAGCAACCTGGAATTGC
TAGTATCAAAGAAGGTAAGTTTCCTCGTTTCCTTCAAGATACTTTCTCAT
ACAAACCAAATATAGAGTCTCTTGACCACGCTACGGCGGCTTCCCTGTTT
GCACGCAACCCCGGGCTCGTTTCCATGATTCAGGGAAAACTTGGATCCCT
AGTTGGCCGCTCTTCGGGTTACATTGAATCCTTACCCGTGTCAGTCCGCC
GGCGCGTTGCTGGCCTGAAGGGCATCCAGAAGGAGCACGCTAAATTGGAA
GCCCAGTTTCAGGAAGAGGTACTGGAACTTGAGAAGAAATATTTCGCGAA
GTTTACTCCGTTGTATCAGAGGCGTTCCACGATAGTCAACGGAGCCGCAG
AGCCTACGGATGGTGAAGTCGAGGCGGGACAGGGTGATGAAGAGGATGTT
GACTCTAAAGATGAGGCTGAAGCCACCAAAGAAGAGGACCAGGAGTCTCA
AATCGCCGGCATACCTGAATTCTGGCTCTCAGCTATGAAAAACCAGATTT
CTCTTGCAGAAATGATCACCGAACGAGATGAAGAGGCTTTGAAACATCTC
GTCGATATCCGTATGGAATACCTCGATCGCCCAGGCTTCCGTCTCATCTT
CGAATTCTCGGAGAATGCCTATTTCACAAACAAGACTATTTCGAAGACCT
ACTACTACAAGGAAGAAAACGGCTACGGCGGTGATTTCATCTACGATCAC
GCCGAAGGCACTAAGATCGATTGGAAGGCTGATAAAGATCTCACTGTCCG
CATTGAGAGCAAGAAACAGAGAAACAAGAGTGAGTGTCGAAATAGCATTT
ATCGAATGTGCACTGTAGCTGACATCGCCTAGACACGAAACAGACTCGGA
TTGTCAAAATTACCGTCCCCACGGAGTCATTTTTCAACTTCTTCTCCCCC
CCTCAGCCCCCGACTGACGACGATGATACCGTTGCTACTGATATCGAAGA
GCGACTGGAACTTGATTATCAGCTCGGTGAAGACATCAAGGAGAAGCTTA
TCCCCAGAGCCATCGACTGGTTCACGGGAGAGGCCCTTCAGTTCGAAGAG
TTGGGTGACGACATGGATGCCGATGAATACGACGAGGAGGACGATGAAGA
CGAGGATGAAGATGATGAAGACGATGATGATGAGAGGAGGTCCGACCGGG
ACGTCGATGATGACTCCGACGAAGAGGTGCGCATTAATTGATTATCGTTT
GCTTATACCGTCTGTCCGTGCTGACACCAGAACAGGATGGCGCCTCAAAG
CCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTGA back to topCoding sequence (CDS) from alignment at An17:566091..567576- >CBS51388_010670-T1 ID=CBS51388_010670-T1|Name=CBS51388_010670-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6180bp|location=Sequence derived from alignment at An17:566091..567576- (Aspergillus niger CBS 513.88)
GATGGCGCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTG
AACACGAAACAGACTCGGATTGTCAAAATTACCGTCCCCACGGAGTCATT
TTTCAACTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGATGATACCG
TTGCTACTGATATCGAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAA
GACATCAAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGA
GGCCCTTCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGATGAATACG
ACGAGGAGGACGATGAAGACGAGGATGAAGATGATGAAGACGATGATGAT
GAGAGGAGGTCCGACCGGGACGTCGATGATGACTCCGACGAAGAGAGTCT
CTTGACCACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGT
TTCCATGATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTT
ACATTGAATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAG
GGCATCCAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGT
ACTGGAACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGA
GGCGTTCCACGATAGTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTC
GAGGCGGGACAGGGTGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGA
AGCCACCAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCATACCTGAAT
TCTGGCTCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAATGATCACC
GAACGAGATGAAGAGGCTTTGAAACATCTCGTCGATATCCGTATGGAATA
CCTCGATCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCT
ATTTCACAAACAAGACTATTTCGAAGACCTACTACTACAAGGAAGAAAAC
GGCTACGGCGGTGATTTCATCTACGATCACGCCGAAGGCACTAAGATCGA
TTGGAAGGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGA
GAAACAAGAGACACCACAAAATACCCCGGCCAACAATGCTCCTATTTCTT
CTCATGCCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCC
CATCAGGAATAAGAAAGCGGACTTTCCAGTGGCTCCGATGGCGCCTCAAA
GCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTGAACACGAAACAGAC
TCGGATTGTCAAAATTACCGTCCCCACGGAGTCATTTTTCAACTTCTTCT
CCCCCCCTCAGCCCCCGACTGACGACGATGATACCGTTGCTACTGATATC
GAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAAGACATCAAGGAGAA
GCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGAGGCCCTTCAGTTCG
AAGAGTTGGGTGACGACATGGATGCCGATGAATACGACGAGGAGGACGAT
GAAGACGAGGATGAAGATGATGAAGACGATGATGATGAGAGGAGGTCCGA
CCGGGACGTCGATGATGACTCCGACGAAGAGAGTCTCTTGACCACGCTAC
GGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGTTTCCATGATTCAGG
GAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTTACATTGAATCCTTA
CCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAGGGCATCCAGAAGGA
GCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGTACTGGAACTTGAGA
AGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGAGGCGTTCCACGATA
GTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTCGAGGCGGGACAGGG
TGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGAAGCCACCAAAGAAG
AGGACCAGGAGTCTCAAATCGCCGGCATACCTGAATTCTGGCTCTCAGCT
ATGAAAAACCAGATTTCTCTTGCAGAAATGATCACCGAACGAGATGAAGA
GGCTTTGAAACATCTCGTCGATATCCGTATGGAATACCTCGATCGCCCAG
GCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCTATTTCACAAACAAG
ACTATTTCGAAGACCTACTACTACAAGGAAGAAAACGGCTACGGCGGTGA
TTTCATCTACGATCACGCCGAAGGCACTAAGATCGATTGGAAGGCTGATA
AAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGAGAAACAAGAGACAC
CACAAAATACCCCGGCCAACAATGCTCCTATTTCTTCTCATGCCCAGCAA
CCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCCCATCAGGAATAAGA
AAGCGGACTTTCCAGTGGCTCCGATGGCGCCTCAAAGCCGAAGAAGGAGG
CAGCGGAATGTAAACAGAGCTGAACACGAAACAGACTCGGATTGTCAAAA
TTACCGTCCCCACGGAGTCATTTTTCAACTTCTTCTCCCCCCCTCAGCCC
CCGACTGACGACGATGATACCGTTGCTACTGATATCGAAGAGCGACTGGA
ACTTGATTATCAGCTCGGTGAAGACATCAAGGAGAAGCTTATCCCCAGAG
CCATCGACTGGTTCACGGGAGAGGCCCTTCAGTTCGAAGAGTTGGGTGAC
GACATGGATGCCGATGAATACGACGAGGAGGACGATGAAGACGAGGATGA
AGATGATGAAGACGATGATGATGAGAGGAGGTCCGACCGGGACGTCGATG
ATGACTCCGACGAAGAGAGTCTCTTGACCACGCTACGGCGGCTTCCCTGT
TTGCACGCAACCCCGGGCTCGTTTCCATGATTCAGGGAAAACTTGGATCC
CTAGTTGGCCGCTCTTCGGGTTACATTGAATCCTTACCCGTGTCAGTCCG
CCGGCGCGTTGCTGGCCTGAAGGGCATCCAGAAGGAGCACGCTAAATTGG
AAGCCCAGTTTCAGGAAGAGGTACTGGAACTTGAGAAGAAATATTTCGCG
AAGTTTACTCCGTTGTATCAGAGGCGTTCCACGATAGTCAACGGAGCCGC
AGAGCCTACGGATGGTGAAGTCGAGGCGGGACAGGGTGATGAAGAGGATG
TTGACTCTAAAGATGAGGCTGAAGCCACCAAAGAAGAGGACCAGGAGTCT
CAAATCGCCGGCATACCTGAATTCTGGCTCTCAGCTATGAAAAACCAGAT
TTCTCTTGCAGAAATGATCACCGAACGAGATGAAGAGGCTTTGAAACATC
TCGTCGATATCCGTATGGAATACCTCGATCGCCCAGGCTTCCGTCTCATC
TTCGAATTCTCGGAGAATGCCTATTTCACAAACAAGACTATTTCGAAGAC
CTACTACTACAAGGAAGAAAACGGCTACGGCGGTGATTTCATCTACGATC
ACGCCGAAGGCACTAAGATCGATTGGAAGGCTGATAAAGATCTCACTGTC
CGCATTGAGAGCAAGAAACAGAGAAACAAGAGACACCACAAAATACCCCG
GCCAACAATGCTCCTATTTCTTCTCATGCCCAGCAACCTGGAATTGCTAG
TATCAAAGAAGATGTCTGAGCCCATCAGGAATAAGAAAGCGGACTTTCCA
GTGGCTCCGATGGCGCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAA
CAGAGCTGAACACGAAACAGACTCGGATTGTCAAAATTACCGTCCCCACG
GAGTCATTTTTCAACTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGA
TGATACCGTTGCTACTGATATCGAAGAGCGACTGGAACTTGATTATCAGC
TCGGTGAAGACATCAAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTC
ACGGGAGAGGCCCTTCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGA
TGAATACGACGAGGAGGACGATGAAGACGAGGATGAAGATGATGAAGACG
ATGATGATGAGAGGAGGTCCGACCGGGACGTCGATGATGACTCCGACGAA
GAGAGTCTCTTGACCACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCC
GGGCTCGTTTCCATGATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTC
TTCGGGTTACATTGAATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTG
GCCTGAAGGGCATCCAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAG
GAAGAGGTACTGGAACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTT
GTATCAGAGGCGTTCCACGATAGTCAACGGAGCCGCAGAGCCTACGGATG
GTGAAGTCGAGGCGGGACAGGGTGATGAAGAGGATGTTGACTCTAAAGAT
GAGGCTGAAGCCACCAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCAT
ACCTGAATTCTGGCTCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAA
TGATCACCGAACGAGATGAAGAGGCTTTGAAACATCTCGTCGATATCCGT
ATGGAATACCTCGATCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGA
GAATGCCTATTTCACAAACAAGACTATTTCGAAGACCTACTACTACAAGG
AAGAAAACGGCTACGGCGGTGATTTCATCTACGATCACGCCGAAGGCACT
AAGATCGATTGGAAGGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAA
GAAACAGAGAAACAAGAGACACCACAAAATACCCCGGCCAACAATGCTCC
TATTTCTTCTCATGCCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATG
TCTGAGCCCATCAGGAATAAGAAAGCGGACTTTCCAGTGGCTCCGATGGC
GCCTCAAAGCCGAAGAAGGAGGCAGCGGAATGTAAACAGAGCTGAACACG
AAACAGACTCGGATTGTCAAAATTACCGTCCCCACGGAGTCATTTTTCAA
CTTCTTCTCCCCCCCTCAGCCCCCGACTGACGACGATGATACCGTTGCTA
CTGATATCGAAGAGCGACTGGAACTTGATTATCAGCTCGGTGAAGACATC
AAGGAGAAGCTTATCCCCAGAGCCATCGACTGGTTCACGGGAGAGGCCCT
TCAGTTCGAAGAGTTGGGTGACGACATGGATGCCGATGAATACGACGAGG
AGGACGATGAAGACGAGGATGAAGATGATGAAGACGATGATGATGAGAGG
AGGTCCGACCGGGACGTCGATGATGACTCCGACGAAGAGAGTCTCTTGAC
CACGCTACGGCGGCTTCCCTGTTTGCACGCAACCCCGGGCTCGTTTCCAT
GATTCAGGGAAAACTTGGATCCCTAGTTGGCCGCTCTTCGGGTTACATTG
AATCCTTACCCGTGTCAGTCCGCCGGCGCGTTGCTGGCCTGAAGGGCATC
CAGAAGGAGCACGCTAAATTGGAAGCCCAGTTTCAGGAAGAGGTACTGGA
ACTTGAGAAGAAATATTTCGCGAAGTTTACTCCGTTGTATCAGAGGCGTT
CCACGATAGTCAACGGAGCCGCAGAGCCTACGGATGGTGAAGTCGAGGCG
GGACAGGGTGATGAAGAGGATGTTGACTCTAAAGATGAGGCTGAAGCCAC
CAAAGAAGAGGACCAGGAGTCTCAAATCGCCGGCATACCTGAATTCTGGC
TCTCAGCTATGAAAAACCAGATTTCTCTTGCAGAAATGATCACCGAACGA
GATGAAGAGGCTTTGAAACATCTCGTCGATATCCGTATGGAATACCTCGA
TCGCCCAGGCTTCCGTCTCATCTTCGAATTCTCGGAGAATGCCTATTTCA
CAAACAAGACTATTTCGAAGACCTACTACTACAAGGAAGAAAACGGCTAC
GGCGGTGATTTCATCTACGATCACGCCGAAGGCACTAAGATCGATTGGAA
GGCTGATAAAGATCTCACTGTCCGCATTGAGAGCAAGAAACAGAGAAACA
AGAGACACCACAAAATACCCCGGCCAACAATGCTCCTATTTCTTCTCATG
CCCAGCAACCTGGAATTGCTAGTATCAAAGAAGATGTCTGAGCCCATCAG
GAATAAGAAAGCGGACTTTCCAGTGGCTCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006334 | nucleosome assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263ULA |
| DBxref | InterPro:IPR037231 |
| DBxref | InterPro:IPR002164 |
| DBxref | PFAM:PF00956 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:566091..567576 - |
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