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CBS51388_010674-T1, CBS51388_010674-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010674-T1
Unique NameCBS51388_010674-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:582392..583137-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010674-T1 ID=CBS51388_010674-T1|Name=CBS51388_010674-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=746bp|location=Sequence derived from alignment at An17:582392..583137- (Aspergillus niger CBS 513.88)
ATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCTC
TGTGGGTATGGCCTCCTATCTCTATGAAAAGCCTTGCTTGTTTGGTCTAC
TCATACTCACTAAATCTTTTCCAGGTAAATCTTCTCTTACAGTTCGATTT
GTTGAACATCATTTTGTAGAAAGCTACTATCCAACGATCGAAAACACTTT
CAGTCGAATCATCAAATACAACGGCCAAGATTATGCCACTGAAATCGTTG
ACACAGCTGGTCAGGTATGGAGAAAATCTGACCCTGATCCTAGAGTTTCC
GGTATATGGCTAATACTGCTGTAGGACGAGTACAGTATATTGAACTCCAA
GCATTTCATCGGAATACATGGGTATATTATTGTCTACTCGGTGGCTTCAC
GCCAGTCGTTCGACATGGTGAGGGTCATACGTGACAAGATTCTGAACCAT
CTTGTGAGTATCTCATTTGTACCTTGCAGCCACCGTAGTCGCTGACATGA
AATAAGGGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGA
TCTCAAATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTT
GTGAAGAATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTAT
AATGTTGCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCA
AAACCCATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAATGTGA
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Coding sequence (CDS) from alignment at An17:582392..583137-

>CBS51388_010674-T1 ID=CBS51388_010674-T1|Name=CBS51388_010674-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2256bp|location=Sequence derived from alignment at An17:582392..583137- (Aspergillus niger CBS 513.88)
GGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGATCTCAA
ATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTTGTGAAG
AATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTATAATGTT
GCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCAAAACCC
ATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAATGTGAGACGAGTACA
GTATATTGAACTCCAAGCATTTCATCGGAATACATGGGTATATTATTGTC
TACTCGGTGGCTTCACGCCAGTCGTTCGACATGGTGAGGGTCATACGTGA
CAAGATTCTGAACCATCTTGTAAATCTTCTCTTACAGTTCGATTTGTTGA
ACATCATTTTGTAGAAAGCTACTATCCAACGATCGAAAACACTTTCAGTC
GAATCATCAAATACAACGGCCAAGATTATGCCACTGAAATCGTTGACACA
GCTGGTCAGATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGG
CAGTCGCTCTGTGGGGTGCCGATCATGTACCCCTTGTGCTTGTCGGAAAT
AAAAGCGATCTCAAATCTGAGCAACGCCAGGTGTCTCTAGATGAAGGCCG
GCAGCTTTGTGAAGAATTCCATTGTGCATTTACTGAGGCTAGTGCTCGTC
TCGACTATAATGTTGCGAAAGCGTTTGACTTAATGATCGGGGAAATCGAA
AAGTCGCAAAACCCATCACAGCCGGCAGGAGGCAACAAATGCGCTGTAAT
GTGAGACGAGTACAGTATATTGAACTCCAAGCATTTCATCGGAATACATG
GGTATATTATTGTCTACTCGGTGGCTTCACGCCAGTCGTTCGACATGGTG
AGGGTCATACGTGACAAGATTCTGAACCATCTTGTAAATCTTCTCTTACA
GTTCGATTTGTTGAACATCATTTTGTAGAAAGCTACTATCCAACGATCGA
AAACACTTTCAGTCGAATCATCAAATACAACGGCCAAGATTATGCCACTG
AAATCGTTGACACAGCTGGTCAGATGCCTAGTGCACCGAAGCAGCGCAAA
ATAGCTATTGTTGGCAGTCGCTCTGTGGGGTGCCGATCATGTACCCCTTG
TGCTTGTCGGAAATAAAAGCGATCTCAAATCTGAGCAACGCCAGGTGTCT
CTAGATGAAGGCCGGCAGCTTTGTGAAGAATTCCATTGTGCATTTACTGA
GGCTAGTGCTCGTCTCGACTATAATGTTGCGAAAGCGTTTGACTTAATGA
TCGGGGAAATCGAAAAGTCGCAAAACCCATCACAGCCGGCAGGAGGCAAC
AAATGCGCTGTAATGTGAGACGAGTACAGTATATTGAACTCCAAGCATTT
CATCGGAATACATGGGTATATTATTGTCTACTCGGTGGCTTCACGCCAGT
CGTTCGACATGGTGAGGGTCATACGTGACAAGATTCTGAACCATCTTGTA
AATCTTCTCTTACAGTTCGATTTGTTGAACATCATTTTGTAGAAAGCTAC
TATCCAACGATCGAAAACACTTTCAGTCGAATCATCAAATACAACGGCCA
AGATTATGCCACTGAAATCGTTGACACAGCTGGTCAGATGCCTAGTGCAC
CGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCTCTGTGGGGTGCCGA
TCATGTACCCCTTGTGCTTGTCGGAAATAAAAGCGATCTCAAATCTGAGC
AACGCCAGGTGTCTCTAGATGAAGGCCGGCAGCTTTGTGAAGAATTCCAT
TGTGCATTTACTGAGGCTAGTGCTCGTCTCGACTATAATGTTGCGAAAGC
GTTTGACTTAATGATCGGGGAAATCGAAAAGTCGCAAAACCCATCACAGC
CGGCAGGAGGCAACAAATGCGCTGTAATGTGAGACGAGTACAGTATATTG
AACTCCAAGCATTTCATCGGAATACATGGGTATATTATTGTCTACTCGGT
GGCTTCACGCCAGTCGTTCGACATGGTGAGGGTCATACGTGACAAGATTC
TGAACCATCTTGTAAATCTTCTCTTACAGTTCGATTTGTTGAACATCATT
TTGTAGAAAGCTACTATCCAACGATCGAAAACACTTTCAGTCGAATCATC
AAATACAACGGCCAAGATTATGCCACTGAAATCGTTGACACAGCTGGTCA
GATGCCTAGTGCACCGAAGCAGCGCAAAATAGCTATTGTTGGCAGTCGCT
CTGTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHB1CBS51388_010674Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010674-T1CBS51388_010674-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010674-T1.cdsCBS51388_010674-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010674-T1.exon4CBS51388_010674-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_010674-T1.exon3CBS51388_010674-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010674-T1.exon2CBS51388_010674-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010674-T1.exon1CBS51388_010674-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductGTP-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:582392..583137 -
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