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CBS51388_010679-T1, CBS51388_010679-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010679-T1
Unique NameCBS51388_010679-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:6777..8378+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010679-T1 ID=CBS51388_010679-T1|Name=CBS51388_010679-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1602bp|location=Sequence derived from alignment at An18:6777..8378+ (Aspergillus niger CBS 513.88)
ATGCTTCGTGGAAAGTCGCTGCACCTCGCACAGGTGCTTCTCACGGTAGC
TCCTGCATTCATTACCTACGGATACAATCAGGCTGGAGTAGCACCGCTTG
CGAACCTACAGTCATGGTAATCCATCTCGTTAAAATAAATGACTGAAATA
CTTTCTTGGGCTGATGAGACTTATAGGGTCACCCATTTCCCGGAAATTGA
CACACTCAACACCGATGGTGCCATCAAGAAGAGAAACTCGACAAGAAAAG
GCGCGGTCATTGCCTCATATCAACTGGGGGCCCTTCTGGGAGCGCTCTCA
TGCGCCCACTTCGGTGACCGTTTCGGCCGGCGCAGGACAGTTTTCATGGC
GACTATTATTACACTCATTGGAGAGGTGCTCCAAACATCTTCTTACGGCA
TCATTCAGTTCACTCTGGGTCGAGTCATCCTTGGCATCGGGGTCGGGCAA
CTGAGCGCTACCGTACCGGTATGGCAGGCCGAATGCAGTTCTGCAAAGCA
TCGTGGGCAGCATGTGGTAGTCGATGGGATTTGTATGGTCCTTGGCTTCG
TCATCACAAACTGGGTTGCCTACGGGTTCGGGAAAACGGCCGGTGAAACG
CAGTGGCGTGTCCCCTTGGCCTTGGCTCTTGTCTTTCCCCTGATCATCCT
CGCATCCGTATTTATGCTCCCCGAATCACCACGATGGCTGGTTCTGGTGT
CTAAAAGGGACAAAGCAGCGCACAGTCTAGCGGCGTACAGAGGTCTCCCG
GTCAACGACGATGCGGTTCAAAGAGAAATTGCGAGCATAGAGTCATCGCT
GGAGCTCACAGCACAGTCAAAGAACATCACATTACGAGAATTATTTATGG
GCGATGATAAGGAACGTCTCCTGTACCGATTCGCTCTCTGTCTTGTTATC
CAATTTTTCCAGCAAATGTGCGGGGGCAATTTGATCTCCACCTACATTTC
AACGATATTTGAGGAGAATCTGAACCTCAGTGAGGAGTTGTCCCGGATCT
TAGGTGCCAGCGCACTTACATGGAAATTTATATGCAACTTTATTCCATTT
TTTGCAATCGACCGCTTTGGCAGACGGAAGGTGTTCATGTTCAGTGGGGC
CGGAATGTGTCTTTGCATGATAGTCTTAACTATCACGACCAAGTTTGCTG
ATGCCAGTCGGGGACTATCAATTGTCTCTGTGGTGTTTATTTGGCTCTTC
AACATGTTCTATCCCATTGGGTTCTCTGGTGCAAACTTTCTCTATTGTAC
TGAAATTGCTCCTATGCGTCTGCGTGTGGCGATGTCGTCTGCGTCAACCG
CAAACAAGTGGCTGTGGAACTTTATCGTCGTTATGATAACCCCTGTCGCG
CTTGATACAATTGGGTGGAGATACTACATTGTATATGCTGTCATTTCTGC
CTGCATTCCTGTCACAGTGTATCTCTTCTACCCAGAGACAATGGGCCGCA
ACCTAGAAGCCTTGAACGAGGTGTTCCACGATGCCCCGTCCGCGTGGCAT
ATCGTGGCGATGGCGAGAAGACTTCCACAGGGAGATGTGACGGAGTTGAA
CGGGCAGATGGAGGAGGACAAGGTAATCGTGGAGCAGAAGGAGCACGCTT
GA
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Coding sequence (CDS) from alignment at An18:6777..8378+

>CBS51388_010679-T1 ID=CBS51388_010679-T1|Name=CBS51388_010679-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3084bp|location=Sequence derived from alignment at An18:6777..8378+ (Aspergillus niger CBS 513.88)
ATGCTTCGTGGAAAGTCGCTGCACCTCGCACAGGTGCTTCTCACGGTAGC
TCCTGCATTCATTACCTACGGATACAATCAGGCTGGAGTAGCACCGCTTG
CGAACCTACAGTCATGGGTCACCCATTTCCCGGAAATTGACACACTCAAC
ACCGATGGTGCCATCAAGAAGAGAAACTCGACAAGAAAAGGCGCGGTCAT
TGCCTCATATCAACTGGGGGCCCTTCTGGGAGCGCTCTCATGCGCCCACT
TCGGTGACCGTTTCGGCCGGCGCAGGACAGTTTTCATGGCGACTATTATT
ACACTCATTGGAGAGGTGCTCCAAACATCTTCTTACGGCATCATTCAGTT
CACTCTGGGTCGAGTCATCCTTGGCATCGGGGTCGGGCAACTGAGCGCTA
CCGTACCGGTATGGCAGGCCGAATGCAGTTCTGCAAAGCATCGTGGGCAG
CATGTGGTAGTCGATGGGATTTGTATGGTCCTTGGCTTCGTCATCACAAA
CTGGGTTGCCTACGGGTTCGGGAAAACGGCCGGTGAAACGCAGTGGCGTG
TCCCCTTGGCCTTGGCTCTTGTCTTTCCCCTGATCATCCTCGCATCCGTA
TTTATGCTCCCCGAATCACCACGATGGCTGGTTCTGGTGTCTAAAAGGGA
CAAAGCAGCGCACAGTCTAGCGGCGTACAGAGGTCTCCCGGTCAACGACG
ATGCGGTTCAAAGAGAAATTGCGAGCATAGAGTCATCGCTGGAGCTCACA
GCACAGTCAAAGAACATCACATTACGAGAATTATTTATGGGCGATGATAA
GGAACGTCTCCTGTACCGATTCGCTCTCTGTCTTGTTATCCAATTTTTCC
AGCAAATGTGCGGGGGCAATTTGATCTCCACCTACATTTCAACGATATTT
GAGGAGAATCTGAACCTCAGTGAGGAGTTGTCCCGGATCTTAGGTGCCAG
CGCACTTACATGGAAATTTATATGCAACTTTATTCCATTTTTTGCAATCG
ACCGCTTTGGCAGACGGAAGGTGTTCATGTTCAGTGGGGCCGGAATGTGT
CTTTGCATGATAGTCTTAACTATCACGACCAAGTTTGCTGATGCCAGTCG
GGGACTATCAATTGTCTCTGTGGTGTTTATTTGGCTCTTCAACATGTTCT
ATCCCATTGGGTTCTCTGGTGCAAACTTTCTCTATTGTACTGAAATTGCT
CCTATGCGTCTGCGTGTGGCGATGTCGTCTGCGTCAACCGCAAACAAGTG
GCTGTGGAACTTTATCGTCGTTATGATAACCCCTGTCGCGCTTGATACAA
TTGGGTGGAGATACTACATTGTATATGCTGTCATTTCTGCCTGCATTCCT
GTCACAGTGTATCTCTTCTACCCAGAGACAATGGGCCGCAACCTAGAAGC
CTTGAACGAGGTGTTCCACGATGCCCCGTCCGCGTGGCATATCGTGGCGA
TGGCGAGAAGACTTCCACAGGGAGATGTGACGGAGTTGAACGGGCAGATG
GAGGAGGACAAGGTAATCGTGGAGCAGAAGGAGCACGCTTGAATGCTTCG
TGGAAAGTCGCTGCACCTCGCACAGGTGCTTCTCACGGTAGCTCCTGCAT
TCATTACCTACGGATACAATCAGGCTGGAGTAGCACCGCTTGCGAACCTA
CAGTCATGGGTCACCCATTTCCCGGAAATTGACACACTCAACACCGATGG
TGCCATCAAGAAGAGAAACTCGACAAGAAAAGGCGCGGTCATTGCCTCAT
ATCAACTGGGGGCCCTTCTGGGAGCGCTCTCATGCGCCCACTTCGGTGAC
CGTTTCGGCCGGCGCAGGACAGTTTTCATGGCGACTATTATTACACTCAT
TGGAGAGGTGCTCCAAACATCTTCTTACGGCATCATTCAGTTCACTCTGG
GTCGAGTCATCCTTGGCATCGGGGTCGGGCAACTGAGCGCTACCGTACCG
GTATGGCAGGCCGAATGCAGTTCTGCAAAGCATCGTGGGCAGCATGTGGT
AGTCGATGGGATTTGTATGGTCCTTGGCTTCGTCATCACAAACTGGGTTG
CCTACGGGTTCGGGAAAACGGCCGGTGAAACGCAGTGGCGTGTCCCCTTG
GCCTTGGCTCTTGTCTTTCCCCTGATCATCCTCGCATCCGTATTTATGCT
CCCCGAATCACCACGATGGCTGGTTCTGGTGTCTAAAAGGGACAAAGCAG
CGCACAGTCTAGCGGCGTACAGAGGTCTCCCGGTCAACGACGATGCGGTT
CAAAGAGAAATTGCGAGCATAGAGTCATCGCTGGAGCTCACAGCACAGTC
AAAGAACATCACATTACGAGAATTATTTATGGGCGATGATAAGGAACGTC
TCCTGTACCGATTCGCTCTCTGTCTTGTTATCCAATTTTTCCAGCAAATG
TGCGGGGGCAATTTGATCTCCACCTACATTTCAACGATATTTGAGGAGAA
TCTGAACCTCAGTGAGGAGTTGTCCCGGATCTTAGGTGCCAGCGCACTTA
CATGGAAATTTATATGCAACTTTATTCCATTTTTTGCAATCGACCGCTTT
GGCAGACGGAAGGTGTTCATGTTCAGTGGGGCCGGAATGTGTCTTTGCAT
GATAGTCTTAACTATCACGACCAAGTTTGCTGATGCCAGTCGGGGACTAT
CAATTGTCTCTGTGGTGTTTATTTGGCTCTTCAACATGTTCTATCCCATT
GGGTTCTCTGGTGCAAACTTTCTCTATTGTACTGAAATTGCTCCTATGCG
TCTGCGTGTGGCGATGTCGTCTGCGTCAACCGCAAACAAGTGGCTGTGGA
ACTTTATCGTCGTTATGATAACCCCTGTCGCGCTTGATACAATTGGGTGG
AGATACTACATTGTATATGCTGTCATTTCTGCCTGCATTCCTGTCACAGT
GTATCTCTTCTACCCAGAGACAATGGGCCGCAACCTAGAAGCCTTGAACG
AGGTGTTCCACGATGCCCCGTCCGCGTGGCATATCGTGGCGATGGCGAGA
AGACTTCCACAGGGAGATGTGACGGAGTTGAACGGGCAGATGGAGGAGGA
CAAGGTAATCGTGGAGCAGAAGGAGCACGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010679CBS51388_010679Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010679-T1.exon1CBS51388_010679-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010679-T1.exon2CBS51388_010679-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010679-T1.cdsCBS51388_010679-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010679-T1CBS51388_010679-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-24)
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:6777..8378 +
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