You are here

CBS51388_010685-T1, CBS51388_010685-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010685-T1
Unique NameCBS51388_010685-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:23817..24648+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010685-T1 ID=CBS51388_010685-T1|Name=CBS51388_010685-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=832bp|location=Sequence derived from alignment at An18:23817..24648+ (Aspergillus niger CBS 513.88)
ATGATGAAAGGGCCCGAAGAGCATGGTAAGTTGAGCGATCTCTGTATATC ACTCTTAAGTGTGCTTCTAACTTCAATAAGGCTCATAGAGGCTGATATCC AGGCGCAATGGCTTGCGGTTCCTCGAAGTTGTCGGCTGGAGGGCGGCCTT AAAGCCTGTGACCGGCGACCAGTAGAACGAGACTTCATGGTTAACATGAA GTTGAACTACTTACATGTCCAATTCCTTCTGCGGCTTGCATTAGTCCGCC CTATGTCCACGGAGCCCGACTCGGACTTGCTCAATGTCTCCCTTGAAATG TTGGGCCTTGTTGTAGAAACCATTTTACTCAAAGATCAGATAGTGAACTC TGGTACATCGCTCGTATGGAAGGTGGGCTCCATGTGCATCCCAATTTGCA ACATCATATCTAACTAGAACGATATCAAAGGTTGCATACTATGGCTTGTC AGCTGCGGGAATGATTTGTCTCACTCTCGTCAACCGCTCATTTGCAATTG GAAGCTTCGCAACAAGTTACTCTAAAATATTCCAAGAGTTAAGCATTCTT GCGGCAGAAATCGAACGCGGCACATTAGTATATGTGGACTCACCCAACTA TGCCTTGCTAGCTCGCGCAACCCAAACCATAAAGGCTATTCTTGATCGTA TGATGACACCTTCGGACAATACAGTGGTGGCTCCAGATAACCAACATGAA GGGGCGGCTGCCTCTGAGCAAAGGGACGCCCTATATGACGAATCCTGGGG GTTGTGGGACAATACCAACCTCCAAGAATTTGAACTCAGTTTCTGGCACA ATCTTGCCGGTCACCCTTCGCTAAACCAATGA
back to top

Coding sequence (CDS) from alignment at An18:23817..24648+

>CBS51388_010685-T1 ID=CBS51388_010685-T1|Name=CBS51388_010685-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2133bp|location=Sequence derived from alignment at An18:23817..24648+ (Aspergillus niger CBS 513.88)
ATGATGAAAGGGCCCGAAGAGCATGAGGCTGATATCCAGGCGCAATGGCT
TGCGGTTCCTCGAAGTTGTCGGCTGGAGGGCGGCCTTAAAGCCTGTGACC
GGCGACCAGTAGAACGAGACTTCATGGTTAACATGAAGTTGAACTACTTA
CATGTCCAATTCCTTCTGCGGCTTGCATTAGTCCGCCCTATGTCCACGGA
GCCCGACTCGGACTTGCTCAATGTCTCCCTTGAAATGTTGGGCCTTGTTG
TAGAAACCATTTTACTCAAAGATCAGATAGTGAACTCTGGTACATCGCTC
GTATGGAAGGTTGCATACTATGGCTTGTCAGCTGCGGGAATGATTTGTCT
CACTCTCGTCAACCGCTCATTTGCAATTGGAAGCTTCGCAACAAGTTACT
CTAAAATATTCCAAGAGTTAAGCATTCTTGCGGCAGAAATCGAACGCGGC
ACATTAGTATATGTGGACTCACCCAACTATGCCTTGCTAGCTCGCGCAAC
CCAAACCATAAAGGCTATTCTTGATCGTATGATGACACCTTCGGACAATA
CAGTGGTGGCTCCAGATAACCAACATGAAGGGGCGGCTGCCTCTGAGCAA
AGGGACGCCCTATATGACGAATCCTGGGGGTTGTGGGACAATACCAACCT
CCAAGAATTTGAACTCAGTTTCTGGCACAATCTTGCCGGTCACCCTTCGC
TAAACCAATGAATGATGAAAGGGCCCGAAGAGCATGAGGCTGATATCCAG
GCGCAATGGCTTGCGGTTCCTCGAAGTTGTCGGCTGGAGGGCGGCCTTAA
AGCCTGTGACCGGCGACCAGTAGAACGAGACTTCATGGTTAACATGAAGT
TGAACTACTTACATGTCCAATTCCTTCTGCGGCTTGCATTAGTCCGCCCT
ATGTCCACGGAGCCCGACTCGGACTTGCTCAATGTCTCCCTTGAAATGTT
GGGCCTTGTTGTAGAAACCATTTTACTCAAAGATCAGATAGTGAACTCTG
GTACATCGCTCGTATGGAAGGTTGCATACTATGGCTTGTCAGCTGCGGGA
ATGATTTGTCTCACTCTCGTCAACCGCTCATTTGCAATTGGAAGCTTCGC
AACAAGTTACTCTAAAATATTCCAAGAGTTAAGCATTCTTGCGGCAGAAA
TCGAACGCGGCACATTAGTATATGTGGACTCACCCAACTATGCCTTGCTA
GCTCGCGCAACCCAAACCATAAAGGCTATTCTTGATCGTATGATGACACC
TTCGGACAATACAGTGGTGGCTCCAGATAACCAACATGAAGGGGCGGCTG
CCTCTGAGCAAAGGGACGCCCTATATGACGAATCCTGGGGGTTGTGGGAC
AATACCAACCTCCAAGAATTTGAACTCAGTTTCTGGCACAATCTTGCCGG
TCACCCTTCGCTAAACCAATGAATGATGAAAGGGCCCGAAGAGCATGAGG
CTGATATCCAGGCGCAATGGCTTGCGGTTCCTCGAAGTTGTCGGCTGGAG
GGCGGCCTTAAAGCCTGTGACCGGCGACCAGTAGAACGAGACTTCATGGT
TAACATGAAGTTGAACTACTTACATGTCCAATTCCTTCTGCGGCTTGCAT
TAGTCCGCCCTATGTCCACGGAGCCCGACTCGGACTTGCTCAATGTCTCC
CTTGAAATGTTGGGCCTTGTTGTAGAAACCATTTTACTCAAAGATCAGAT
AGTGAACTCTGGTACATCGCTCGTATGGAAGGTTGCATACTATGGCTTGT
CAGCTGCGGGAATGATTTGTCTCACTCTCGTCAACCGCTCATTTGCAATT
GGAAGCTTCGCAACAAGTTACTCTAAAATATTCCAAGAGTTAAGCATTCT
TGCGGCAGAAATCGAACGCGGCACATTAGTATATGTGGACTCACCCAACT
ATGCCTTGCTAGCTCGCGCAACCCAAACCATAAAGGCTATTCTTGATCGT
ATGATGACACCTTCGGACAATACAGTGGTGGCTCCAGATAACCAACATGA
AGGGGCGGCTGCCTCTGAGCAAAGGGACGCCCTATATGACGAATCCTGGG
GGTTGTGGGACAATACCAACCTCCAAGAATTTGAACTCAGTTTCTGGCAC
AATCTTGCCGGTCACCCTTCGCTAAACCAATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010685CBS51388_010685Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010685-T1.exon1CBS51388_010685-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010685-T1.exon2CBS51388_010685-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010685-T1.exon3CBS51388_010685-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010685-T1.cdsCBS51388_010685-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010685-T1CBS51388_010685-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:23817..24648 +