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CBS51388_010696-T1, CBS51388_010696-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010696-T1
Unique NameCBS51388_010696-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:62226..64136+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010696-T1 ID=CBS51388_010696-T1|Name=CBS51388_010696-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1911bp|location=Sequence derived from alignment at An18:62226..64136+ (Aspergillus niger CBS 513.88)
ATGCCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGAT
CACCAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAGG
TCAGTTGTCTTCAATCCTAGTAGAAGTTCAGGAGGAATTAATCCTGCTCA
TCGTCCTATCAGTGCGATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCG
GCTATCCTTGGAATGTACCTATGGCATCGACTACAGCTTCCATAACATCA
CCCCGACGAAACTGCAGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGG
TCGGCTCTTCTTCCTTTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCT
TCGCCATCTGCCGAGGTCATGCATCTCCCATCAGCTCACGCGAGCCAGGA
TCGCTAGGTCTCTGGACTGCGGAGAAAATCTTGAAACATGCTACCTAAGC
CATTTCCAGAGGCATGTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATC
TGCAACCGCAACCTTCCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCA
TCTCCGCGTCCAACCTCTCGATGTTGGATGCACAAGTACAGAGCCGTATC
CTCGTGGGAAGCCACCGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTT
ACATCACGCTAAAGCGCGGGACTATCATGACCGCGCGTTACAACTTTGTC
GCAAGGCGGACATGAGAGAGCTCTCAGACGATGCACCCGCTATTCTTACA
ACGCAAATTCTTCTTGCATACTACCATCACGCGTCGACCAACCATCAACG
CTTTCGGTCGGCGGTGTGGGATACTGTTGAATTTGTTTCTCGGAATAGGG
AGCACATCATGCGGTCCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCAT
CGCTTATGTGTTTCTCATCGTCTATCGAAGCCACCATCATTACTACTGGA
GGGTGAGGGCAGAAGCTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCG
ACCATTTATACCTCACCGCCGTTCTGGGAATGAGTAGGGATGACCTGATC
TACGACATTCTTATCAAAACTATGGAGATCCGCTCGCGACTGGTAGTCTT
TCGCTGCGTTGCACACCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTG
GCAGTCTCGCGCACAGTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTC
CTCGAGGAGCTTTCCGAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCT
ACTGGGGCTGTTGCAGGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTC
TCCGACATACGAAGCAATCACCTGTCGGTCGCTATGCTGACAGCCATCGT
GATACTATGCCTCCAAGGGAGTGGGACATCTCAACTCATCGAGATACGAT
GAACACCTTGTACCAGATACTTTGCGAGATGATGTTCGAAGAGGCCCGCG
CAGTGTATGCATCTGACGATGCATCGGAGCAACACTTTGCCGCGACGGTG
CTTCCTCGGCTGGCACAGAGTTTCTGCCACATTGTGAGCACCTTGGATTT
TGCTGCAGCAGGTACGGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTC
TCCTCCAGTTGGTCGGTCTCTGGCAGTCAGATAGCTTATTTCACTTCATT
CTGGACGTTACGTGGCCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCA
CTCGCACTATCCCACTCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGG
ACTACTGGTCCCGGGGACAAAGCGTGACACTCGTATTACCTGCCGTTCCA
GAGGATATCGCTAAACTGACACTGCTTGACATCAATCACCCGATGAATGT
GGTGATCTGCGGACATGATCAGGACAATATCGCGTGGATTGACAAAATTC
GTCTCCCTTGA
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Coding sequence (CDS) from alignment at An18:62226..64136+

>CBS51388_010696-T1 ID=CBS51388_010696-T1|Name=CBS51388_010696-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3696bp|location=Sequence derived from alignment at An18:62226..64136+ (Aspergillus niger CBS 513.88)
ATGCCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGAT
CACCAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAGT
GCGATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCGGCTATCCTTGGAA
TGTACCTATGGCATCGACTACAGCTTCCATAACATCACCCCGACGAAACT
GCAGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGGTCGGCTCTTCTTC
CTTTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCTTCGCCATCTGCCG
AGGTCATGCATCTCCCATCAGCTCACGCGAGCCAGGATCGCTAGGTCTCT
GGACTGCGGAGAAAATCTTGAAACATGCTACCTAAGCCATTTCCAGAGGC
ATGTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATCTGCAACCGCAACC
TTCCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCATCTCCGCGTCCAA
CCTCTCGATGTTGGATGCACAAGTACAGAGCCGTATCCTCGTGGGAAGCC
ACCGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTTACATCACGCTAAA
GCGCGGGACTATCATGACCGCGCGTTACAACTTTGTCGCAAGGCGGACAT
GAGAGAGCTCTCAGACGATGCACCCGCTATTCTTACAACGCAAATTCTTC
TTGCATACTACCATCACGCGTCGACCAACCATCAACGCTTTCGGTCGGCG
GTGTGGGATACTGTTGAATTTGTTTCTCGGAATAGGGAGCACATCATGCG
GTCCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCATCGCTTATGTGTTT
CTCATCGTCTATCGAAGCCACCATCATTACTACTGGAGGGTGAGGGCAGA
AGCTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCGACCATTTATACCT
CACCGCCGTTCTGGGAATGAGTAGGGATGACCTGATCTACGACATTCTTA
TCAAAACTATGGAGATCCGCTCGCGACTGGTAGTCTTTCGCTGCGTTGCA
CACCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTGGCAGTCTCGCGCA
CAGTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTCCTCGAGGAGCTTT
CCGAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCTACTGGGGCTGTTG
CAGGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTCTCCGACATACGAA
GCAATCACCTGTCGGTCGCTATGCTGACAGCCATCGTGATACTATGCCTC
CAAGGGAGTGGGACATCTCAACTCATCGAGATACGATGAACACCTTGTAC
CAGATACTTTGCGAGATGATGTTCGAAGAGGCCCGCGCAGTGTATGCATC
TGACGATGCATCGGAGCAACACTTTGCCGCGACGGTGCTTCCTCGGCTGG
CACAGAGTTTCTGCCACATTGTGAGCACCTTGGATTTTGCTGCAGCAGGT
ACGGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTCTCCTCCAGTTGGT
CGGTCTCTGGCAGTCAGATAGCTTATTTCACTTCATTCTGGACGTTACGT
GGCCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCACTCGCACTATCCC
ACTCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGGACTACTGGTCCCG
GGGACAAAGCGTGACACTCGTATTACCTGCCGTTCCAGAGGATATCGCTA
AACTGACACTGCTTGACATCAATCACCCGATGAATGTGGTGATCTGCGGA
CATGATCAGGACAATATCGCGTGGATTGACAAAATTCGTCTCCCTTGAAT
GCCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGATCA
CCAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAGTGC
GATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCGGCTATCCTTGGAATG
TACCTATGGCATCGACTACAGCTTCCATAACATCACCCCGACGAAACTGC
AGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGGTCGGCTCTTCTTCCT
TTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCTTCGCCATCTGCCGAG
GTCATGCATCTCCCATCAGCTCACGCGAGCCAGGATCGCTAGGTCTCTGG
ACTGCGGAGAAAATCTTGAAACATGCTACCTAAGCCATTTCCAGAGGCAT
GTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATCTGCAACCGCAACCTT
CCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCATCTCCGCGTCCAACC
TCTCGATGTTGGATGCACAAGTACAGAGCCGTATCCTCGTGGGAAGCCAC
CGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTTACATCACGCTAAAGC
GCGGGACTATCATGACCGCGCGTTACAACTTTGTCGCAAGGCGGACATGA
GAGAGCTCTCAGACGATGCACCCGCTATTCTTACAACGCAAATTCTTCTT
GCATACTACCATCACGCGTCGACCAACCATCAACGCTTTCGGTCGGCGGT
GTGGGATACTGTTGAATTTGTTTCTCGGAATAGGGAGCACATCATGCGGT
CCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCATCGCTTATGTGTTTCT
CATCGTCTATCGAAGCCACCATCATTACTACTGGAGGGTGAGGGCAGAAG
CTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCGACCATTTATACCTCA
CCGCCGTTCTGGGAATGAGTAGGGATGACCTGATCTACGACATTCTTATC
AAAACTATGGAGATCCGCTCGCGACTGGTAGTCTTTCGCTGCGTTGCACA
CCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTGGCAGTCTCGCGCACA
GTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTCCTCGAGGAGCTTTCC
GAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCTACTGGGGCTGTTGCA
GGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTCTCCGACATACGAAGC
AATCACCTGTCGGTCGCTATGCTGACAGCCATCGTGATACTATGCCTCCA
AGGGAGTGGGACATCTCAACTCATCGAGATACGATGAACACCTTGTACCA
GATACTTTGCGAGATGATGTTCGAAGAGGCCCGCGCAGTGTATGCATCTG
ACGATGCATCGGAGCAACACTTTGCCGCGACGGTGCTTCCTCGGCTGGCA
CAGAGTTTCTGCCACATTGTGAGCACCTTGGATTTTGCTGCAGCAGGTAC
GGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTCTCCTCCAGTTGGTCG
GTCTCTGGCAGTCAGATAGCTTATTTCACTTCATTCTGGACGTTACGTGG
CCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCACTCGCACTATCCCAC
TCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGGACTACTGGTCCCGGG
GACAAAGCGTGACACTCGTATTACCTGCCGTTCCAGAGGATATCGCTAAA
CTGACACTGCTTGACATCAATCACCCGATGAATGTGGTGATCTGCGGACA
TGATCAGGACAATATCGCGTGGATTGACAAAATTCGTCTCCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010696CBS51388_010696Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010696-T1.exon1CBS51388_010696-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010696-T1.exon2CBS51388_010696-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010696-T1.cdsCBS51388_010696-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010696-T1CBS51388_010696-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:62226..64136 +
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