|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:75217..76830+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010701-T1 ID=CBS51388_010701-T1|Name=CBS51388_010701-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1614bp|location=Sequence derived from alignment at An18:75217..76830+ (Aspergillus niger CBS 513.88)
ATGCGCGAGAATACGTCCGACAAAAGAGCAGCCGAGACGGTAGTGGCTGA
CCAGGAGGTGGAAAGTGGTCCGCCGTCAGCCTACCGTCCCACGCGGTGGC
AGAGCAATTTGACCATCCTGAGCTGCGTAAGTACACAACCGATGATCTTT
CTTTTCTTCTCTTCAACCCCACCAAAAGCTACCAATGAACGCGTCGCTAA
CCAGTGGTTTGTGACAGTATATCGCCAACTTCAGCGATGGGTTCCAAAAC
CAATTGGCCAATCCCACAAATGTCATCTTCAAGAAATTGTTGGGCAAATC
CGGCTACCCATCGGAGATGCAGACGCGCATTAGCAATTCCCTGCTCATCG
GTGCCATTCTGGGCGTGGTCGTGCTGGGATACGTCTCGGACATGGCCTCC
CGGCGCGCGGGTCTTCTCTTCACCTCGGGCCTGGTCACCATCTCCACGCT
GATGGCCACCCTGGCCCTGCAGGTGCACCCTTCTCACAACATGCTCTGGT
ACTTTGTCATCGTCCGTGGCATTTGTGGGTTTGGCGTGGGCGGAGAATAC
CCTCCCAGTGCGGCGGCCGGCCTGGAAGAATCGGACGATGTACGTTTCCA
TCCCCTTCTCTTCCCTACCGGCGCACTATCAGGCAGACCAGGACCAAGGA
TTTCAAGACTGTGCAATTAACCAGAATGCTTTGTATGCAGTTTAAGCGCC
GCTACCGAGGACCTGTCTTTGTCTCCTTCACCACGCTGATGGCCACCACC
GCCTCTCCCATTCTGATGATCATCTACCTGATCTGCCTCAAGGCCACCAA
CAACAACCTGCCCATCACCTTCCATGCCATCTACAGCATTGCCACCATCT
TACCCGCCATCATCATGGTTTTGCGATTTTTCATGACCGACTCGACCTTG
TATCACCATTCCAACTTCAAGCGCCAGCGGAAACCCGCCCGATTCTACTG
GGTGCTGGTGCGCCGGTACTGGAAGCGGCTCTTCACCACCTCGCTGGCCT
TCTTCCTCTACGACTTTATCAACTTCCCCAACAGCATCATGTCGAGCACC
ATCATCTCCTCGCTCGTCAAGGACGGCAACATCCAGACGACCGCCATCTG
GCAGGTCATTCTGGCGGCGCTCCCCGTCCCCGGCGTCATCATCGGCGCAT
GGCTGACCAATTTGATCGGACGCCGGGGCACCGGAATGGTCGGATTCGCG
GGCTACGTGGTCCTGGGTTTCATCATCGGTGGCACCTACGCCAAGCTCTC
CCAGCATATCGCGGCCTTTGTCGTGCTCTACGGGTTGCTACAGGCCTTTG
GACACCTGGGGCCCGGCGCCACCATCGGCCTCATATCCAGTGAATCATTC
CCCACCGCCATGCGCGGCATGGGGTACAGTGTGGCCACGGCCTTTGGTCG
CACGGGAGCGGCGGTGGGCACGCAGTGTTTTACGCCCCTGCAGGATGCCG
CCGGAGACAGCGCCACCTTCTACCTTCTGGGTGGCGTGGCGATTCTGGGC
ATGATTGTGTACTGGTTCCTGCCGGAAAGCGGGAAATTGGATCTGAAGAA
GGAGGATCGCGAGCTGGAGGAGTATCTGGCTGGCCATGGATTCACCATGG
AAAAGAAATACTAA back to topCoding sequence (CDS) from alignment at An18:75217..76830+ >CBS51388_010701-T1 ID=CBS51388_010701-T1|Name=CBS51388_010701-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4266bp|location=Sequence derived from alignment at An18:75217..76830+ (Aspergillus niger CBS 513.88)
ATGCGCGAGAATACGTCCGACAAAAGAGCAGCCGAGACGGTAGTGGCTGA
CCAGGAGGTGGAAAGTGGTCCGCCGTCAGCCTACCGTCCCACGCGGTGGC
AGAGCAATTTGACCATCCTGAGCTGCTATATCGCCAACTTCAGCGATGGG
TTCCAAAACCAATTGGCCAATCCCACAAATGTCATCTTCAAGAAATTGTT
GGGCAAATCCGGCTACCCATCGGAGATGCAGACGCGCATTAGCAATTCCC
TGCTCATCGGTGCCATTCTGGGCGTGGTCGTGCTGGGATACGTCTCGGAC
ATGGCCTCCCGGCGCGCGGGTCTTCTCTTCACCTCGGGCCTGGTCACCAT
CTCCACGCTGATGGCCACCCTGGCCCTGCAGGTGCACCCTTCTCACAACA
TGCTCTGGTACTTTGTCATCGTCCGTGGCATTTGTGGGTTTGGCGTGGGC
GGAGAATACCCTCCCAGTGCGGCGGCCGGCCTGGAAGAATCGGACGATTT
TAAGCGCCGCTACCGAGGACCTGTCTTTGTCTCCTTCACCACGCTGATGG
CCACCACCGCCTCTCCCATTCTGATGATCATCTACCTGATCTGCCTCAAG
GCCACCAACAACAACCTGCCCATCACCTTCCATGCCATCTACAGCATTGC
CACCATCTTACCCGCCATCATCATGGTTTTGCGATTTTTCATGACCGACT
CGACCTTGTATCACCATTCCAACTTCAAGCGCCAGCGGAAACCCGCCCGA
TTCTACTGGGTGCTGGTGCGCCGGTACTGGAAGCGGCTCTTCACCACCTC
GCTGGCCTTCTTCCTCTACGACTTTATCAACTTCCCCAACAGCATCATGT
CGAGCACCATCATCTCCTCGCTCGTCAAGGACGGCAACATCCAGACGACC
GCCATCTGGCAGGTCATTCTGGCGGCGCTCCCCGTCCCCGGCGTCATCAT
CGGCGCATGGCTGACCAATTTGATCGGACGCCGGGGCACCGGAATGGTCG
GATTCGCGGGCTACGTGGTCCTGGGTTTCATCATCGGTGGCACCTACGCC
AAGCTCTCCCAGCATATCGCGGCCTTTGTCGTGCTCTACGGGTTGCTACA
GGCCTTTGGACACCTGGGGCCCGGCGCCACCATCGGCCTCATATCCAGTG
AATCATTCCCCACCGCCATGCGCGGCATGGGGTACAGTGTGGCCACGGCC
TTTGGTCGCACGGGAGCGGCGGTGGGCACGCAGTGTTTTACGCCCCTGCA
GGATGCCGCCGGAGACAGCGCCACCTTCTACCTTCTGGGTGGCGTGGCGA
TTCTGGGCATGATTGTGTACTGGTTCCTGCCGGAAAGCGGGAAATTGGAT
CTGAAGAAGGAGGATCGCGAGCTGGAGGAGTATCTGGCTGGCCATGGATT
CACCATGGAAAAGAAATACTAAATGCGCGAGAATACGTCCGACAAAAGAG
CAGCCGAGACGGTAGTGGCTGACCAGGAGGTGGAAAGTGGTCCGCCGTCA
GCCTACCGTCCCACGCGGTGGCAGAGCAATTTGACCATCCTGAGCTGCTA
TATCGCCAACTTCAGCGATGGGTTCCAAAACCAATTGGCCAATCCCACAA
ATGTCATCTTCAAGAAATTGTTGGGCAAATCCGGCTACCCATCGGAGATG
CAGACGCGCATTAGCAATTCCCTGCTCATCGGTGCCATTCTGGGCGTGGT
CGTGCTGGGATACGTCTCGGACATGGCCTCCCGGCGCGCGGGTCTTCTCT
TCACCTCGGGCCTGGTCACCATCTCCACGCTGATGGCCACCCTGGCCCTG
CAGGTGCACCCTTCTCACAACATGCTCTGGTACTTTGTCATCGTCCGTGG
CATTTGTGGGTTTGGCGTGGGCGGAGAATACCCTCCCAGTGCGGCGGCCG
GCCTGGAAGAATCGGACGATTTTAAGCGCCGCTACCGAGGACCTGTCTTT
GTCTCCTTCACCACGCTGATGGCCACCACCGCCTCTCCCATTCTGATGAT
CATCTACCTGATCTGCCTCAAGGCCACCAACAACAACCTGCCCATCACCT
TCCATGCCATCTACAGCATTGCCACCATCTTACCCGCCATCATCATGGTT
TTGCGATTTTTCATGACCGACTCGACCTTGTATCACCATTCCAACTTCAA
GCGCCAGCGGAAACCCGCCCGATTCTACTGGGTGCTGGTGCGCCGGTACT
GGAAGCGGCTCTTCACCACCTCGCTGGCCTTCTTCCTCTACGACTTTATC
AACTTCCCCAACAGCATCATGTCGAGCACCATCATCTCCTCGCTCGTCAA
GGACGGCAACATCCAGACGACCGCCATCTGGCAGGTCATTCTGGCGGCGC
TCCCCGTCCCCGGCGTCATCATCGGCGCATGGCTGACCAATTTGATCGGA
CGCCGGGGCACCGGAATGGTCGGATTCGCGGGCTACGTGGTCCTGGGTTT
CATCATCGGTGGCACCTACGCCAAGCTCTCCCAGCATATCGCGGCCTTTG
TCGTGCTCTACGGGTTGCTACAGGCCTTTGGACACCTGGGGCCCGGCGCC
ACCATCGGCCTCATATCCAGTGAATCATTCCCCACCGCCATGCGCGGCAT
GGGGTACAGTGTGGCCACGGCCTTTGGTCGCACGGGAGCGGCGGTGGGCA
CGCAGTGTTTTACGCCCCTGCAGGATGCCGCCGGAGACAGCGCCACCTTC
TACCTTCTGGGTGGCGTGGCGATTCTGGGCATGATTGTGTACTGGTTCCT
GCCGGAAAGCGGGAAATTGGATCTGAAGAAGGAGGATCGCGAGCTGGAGG
AGTATCTGGCTGGCCATGGATTCACCATGGAAAAGAAATACTAAATGCGC
GAGAATACGTCCGACAAAAGAGCAGCCGAGACGGTAGTGGCTGACCAGGA
GGTGGAAAGTGGTCCGCCGTCAGCCTACCGTCCCACGCGGTGGCAGAGCA
ATTTGACCATCCTGAGCTGCTATATCGCCAACTTCAGCGATGGGTTCCAA
AACCAATTGGCCAATCCCACAAATGTCATCTTCAAGAAATTGTTGGGCAA
ATCCGGCTACCCATCGGAGATGCAGACGCGCATTAGCAATTCCCTGCTCA
TCGGTGCCATTCTGGGCGTGGTCGTGCTGGGATACGTCTCGGACATGGCC
TCCCGGCGCGCGGGTCTTCTCTTCACCTCGGGCCTGGTCACCATCTCCAC
GCTGATGGCCACCCTGGCCCTGCAGGTGCACCCTTCTCACAACATGCTCT
GGTACTTTGTCATCGTCCGTGGCATTTGTGGGTTTGGCGTGGGCGGAGAA
TACCCTCCCAGTGCGGCGGCCGGCCTGGAAGAATCGGACGATTTTAAGCG
CCGCTACCGAGGACCTGTCTTTGTCTCCTTCACCACGCTGATGGCCACCA
CCGCCTCTCCCATTCTGATGATCATCTACCTGATCTGCCTCAAGGCCACC
AACAACAACCTGCCCATCACCTTCCATGCCATCTACAGCATTGCCACCAT
CTTACCCGCCATCATCATGGTTTTGCGATTTTTCATGACCGACTCGACCT
TGTATCACCATTCCAACTTCAAGCGCCAGCGGAAACCCGCCCGATTCTAC
TGGGTGCTGGTGCGCCGGTACTGGAAGCGGCTCTTCACCACCTCGCTGGC
CTTCTTCCTCTACGACTTTATCAACTTCCCCAACAGCATCATGTCGAGCA
CCATCATCTCCTCGCTCGTCAAGGACGGCAACATCCAGACGACCGCCATC
TGGCAGGTCATTCTGGCGGCGCTCCCCGTCCCCGGCGTCATCATCGGCGC
ATGGCTGACCAATTTGATCGGACGCCGGGGCACCGGAATGGTCGGATTCG
CGGGCTACGTGGTCCTGGGTTTCATCATCGGTGGCACCTACGCCAAGCTC
TCCCAGCATATCGCGGCCTTTGTCGTGCTCTACGGGTTGCTACAGGCCTT
TGGACACCTGGGGCCCGGCGCCACCATCGGCCTCATATCCAGTGAATCAT
TCCCCACCGCCATGCGCGGCATGGGGTACAGTGTGGCCACGGCCTTTGGT
CGCACGGGAGCGGCGGTGGGCACGCAGTGTTTTACGCCCCTGCAGGATGC
CGCCGGAGACAGCGCCACCTTCTACCTTCTGGGTGGCGTGGCGATTCTGG
GCATGATTGTGTACTGGTTCCTGCCGGAAAGCGGGAAATTGGATCTGAAG
AAGGAGGATCGCGAGCTGGAGGAGTATCTGGCTGGCCATGGATTCACCAT
GGAAAAGAAATACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:75217..76830 + |
|
