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CBS51388_010712-T1, CBS51388_010712-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010712-T1
Unique NameCBS51388_010712-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:102163..103636+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010712-T1 ID=CBS51388_010712-T1|Name=CBS51388_010712-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1474bp|location=Sequence derived from alignment at An18:102163..103636+ (Aspergillus niger CBS 513.88)
ATGCATTCGATTACTCCCTCGGAAGTCATTAAACTGCGCCAGCTGCTGGC
GGGTACCAACGCTGAGGTCCTCACCGAGGGTGAACCCGGATACGCGGAAG
GCATCAGACGCTGGAGTGACACATGCGAAAAGAAAGCCGTCAGTGGCCCT
TGAGGAAGAAACACTCGATTGATGTTATACTGACTGTGAATGGTTATAGG
GAGCCGTAGTCCTTCCCACCACGGCCGAGGAGGTCTCGCTAACCGTGGTC
TTTGCGAGCAATCACCAGATACCTATGGTGGTTCACAATGGCGGTCACTC
CACTAGCGGCGCCTCCGCAACGGAAGGGGGGATTGTTATCAGTATGACCA
AAATGCGCGGCGTGGTGGTGGACCCCGAACGCAAAACAATCACGGCCCAG
GGAGGCACCGTGTGGGAGGATATCGACCGTGCAGCAGCTCCCTACAAGCT
GGCCACTGTCGGCGGCACCGTCAACCACACGGGGGTTGGTGGGCTGACCC
TGGGAGGAGGTTATGGCTGGTTGACAGGCCGCTACGGGTTGACCATTGAC
AACTTGCTGGGAGCCACCGTCGTGGTGGCGGATGGTCGTATTCTGAAGAC
TTCCGAGACGGAGAATCCGGATCTGTTCTGGGCCATTCGTGGTGCTGGTC
AAAATTTCGGCGTCACCACCGAGTTTATCTTCCAGGCCTATGAGCAGAAG
AACGAAGTGTATGCGGGCCTGCTGAGCTGGCCGGCGCAGTGTCTGCCCCA
GATCATTGAGTTTGTCAACCACTTCGAGGATGACACCAACAAAGGGGACA
TGGGCATCTTCTTTGGTTTCTGCGGTGCCATGCCCCCTGGCCGGGTGAGT
ATCGTGGCGGCCATCTTCTACAATGGACCCCAGGAGGAGGCCGAGAGGCA
ATTTAACCCCATTCTAAAACTGGGACCCACCATTAACACGGCAAAAATGA
TGCCGTATGAGCAGCTGAATAGCATCCAGAACCCCATCGCCACGTATGGG
GGTCGCAAGTCGTTCAGCGGGGCCTTCGTCAAGCTGCCTCTGCAGGTCGA
GTTCTTCCAGGAACTACTGGAGGACTACGGCACGATGATCAAGACCTACG
ATGGGGTCAGTGCCACCGCCGTTCTCTTCGAGCTGGTTTCGCACAAGAAG
GCCATTCAGGTGCCCAAGGATACCATGTCCTATTCGACCCGGGGTCCATG
GTACAATGTGGGTTGTGCGTTCCGCTGGGAAGATCCCAGCTTGGACAAGA
TAATGCGCGAGACACAGCGCGCCCTCATGCGGAAGGTTGGCGATCGTGCC
GGTGGTGGTGCCCATGCCCGAGCATATGCCAACTACTCGCATAGTGACGG
CCGAGCAAAGGATGTCTATGGGGACAACCTGCCGCGGCTGCAGAAGCTGA
AGAAACAGTACGACCCAAAGAATGTGTTCAAGAAGTGGTTGAACCTGCTT
CCCGAGGAAGATGTTCAGATTTAG
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Coding sequence (CDS) from alignment at An18:102163..103636+

>CBS51388_010712-T1 ID=CBS51388_010712-T1|Name=CBS51388_010712-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2826bp|location=Sequence derived from alignment at An18:102163..103636+ (Aspergillus niger CBS 513.88)
ATGCATTCGATTACTCCCTCGGAAGTCATTAAACTGCGCCAGCTGCTGGC
GGGTACCAACGCTGAGGTCCTCACCGAGGGTGAACCCGGATACGCGGAAG
GCATCAGACGCTGGAGTGACACATGCGAAAAGAAAGCCGGAGCCGTAGTC
CTTCCCACCACGGCCGAGGAGGTCTCGCTAACCGTGGTCTTTGCGAGCAA
TCACCAGATACCTATGGTGGTTCACAATGGCGGTCACTCCACTAGCGGCG
CCTCCGCAACGGAAGGGGGGATTGTTATCAGTATGACCAAAATGCGCGGC
GTGGTGGTGGACCCCGAACGCAAAACAATCACGGCCCAGGGAGGCACCGT
GTGGGAGGATATCGACCGTGCAGCAGCTCCCTACAAGCTGGCCACTGTCG
GCGGCACCGTCAACCACACGGGGGTTGGTGGGCTGACCCTGGGAGGAGGT
TATGGCTGGTTGACAGGCCGCTACGGGTTGACCATTGACAACTTGCTGGG
AGCCACCGTCGTGGTGGCGGATGGTCGTATTCTGAAGACTTCCGAGACGG
AGAATCCGGATCTGTTCTGGGCCATTCGTGGTGCTGGTCAAAATTTCGGC
GTCACCACCGAGTTTATCTTCCAGGCCTATGAGCAGAAGAACGAAGTGTA
TGCGGGCCTGCTGAGCTGGCCGGCGCAGTGTCTGCCCCAGATCATTGAGT
TTGTCAACCACTTCGAGGATGACACCAACAAAGGGGACATGGGCATCTTC
TTTGGTTTCTGCGGTGCCATGCCCCCTGGCCGGGTGAGTATCGTGGCGGC
CATCTTCTACAATGGACCCCAGGAGGAGGCCGAGAGGCAATTTAACCCCA
TTCTAAAACTGGGACCCACCATTAACACGGCAAAAATGATGCCGTATGAG
CAGCTGAATAGCATCCAGAACCCCATCGCCACGTATGGGGGTCGCAAGTC
GTTCAGCGGGGCCTTCGTCAAGCTGCCTCTGCAGGTCGAGTTCTTCCAGG
AACTACTGGAGGACTACGGCACGATGATCAAGACCTACGATGGGGTCAGT
GCCACCGCCGTTCTCTTCGAGCTGGTTTCGCACAAGAAGGCCATTCAGGT
GCCCAAGGATACCATGTCCTATTCGACCCGGGGTCCATGGTACAATGTGG
GTTGTGCGTTCCGCTGGGAAGATCCCAGCTTGGACAAGATAATGCGCGAG
ACACAGCGCGCCCTCATGCGGAAGGTTGGCGATCGTGCCGGTGGTGGTGC
CCATGCCCGAGCATATGCCAACTACTCGCATAGTGACGGCCGAGCAAAGG
ATGTCTATGGGGACAACCTGCCGCGGCTGCAGAAGCTGAAGAAACAGTAC
GACCCAAAGAATGTGTTCAAGAAGTGGTTGAACCTGCTTCCCGAGGAAGA
TGTTCAGATTTAGATGCATTCGATTACTCCCTCGGAAGTCATTAAACTGC
GCCAGCTGCTGGCGGGTACCAACGCTGAGGTCCTCACCGAGGGTGAACCC
GGATACGCGGAAGGCATCAGACGCTGGAGTGACACATGCGAAAAGAAAGC
CGGAGCCGTAGTCCTTCCCACCACGGCCGAGGAGGTCTCGCTAACCGTGG
TCTTTGCGAGCAATCACCAGATACCTATGGTGGTTCACAATGGCGGTCAC
TCCACTAGCGGCGCCTCCGCAACGGAAGGGGGGATTGTTATCAGTATGAC
CAAAATGCGCGGCGTGGTGGTGGACCCCGAACGCAAAACAATCACGGCCC
AGGGAGGCACCGTGTGGGAGGATATCGACCGTGCAGCAGCTCCCTACAAG
CTGGCCACTGTCGGCGGCACCGTCAACCACACGGGGGTTGGTGGGCTGAC
CCTGGGAGGAGGTTATGGCTGGTTGACAGGCCGCTACGGGTTGACCATTG
ACAACTTGCTGGGAGCCACCGTCGTGGTGGCGGATGGTCGTATTCTGAAG
ACTTCCGAGACGGAGAATCCGGATCTGTTCTGGGCCATTCGTGGTGCTGG
TCAAAATTTCGGCGTCACCACCGAGTTTATCTTCCAGGCCTATGAGCAGA
AGAACGAAGTGTATGCGGGCCTGCTGAGCTGGCCGGCGCAGTGTCTGCCC
CAGATCATTGAGTTTGTCAACCACTTCGAGGATGACACCAACAAAGGGGA
CATGGGCATCTTCTTTGGTTTCTGCGGTGCCATGCCCCCTGGCCGGGTGA
GTATCGTGGCGGCCATCTTCTACAATGGACCCCAGGAGGAGGCCGAGAGG
CAATTTAACCCCATTCTAAAACTGGGACCCACCATTAACACGGCAAAAAT
GATGCCGTATGAGCAGCTGAATAGCATCCAGAACCCCATCGCCACGTATG
GGGGTCGCAAGTCGTTCAGCGGGGCCTTCGTCAAGCTGCCTCTGCAGGTC
GAGTTCTTCCAGGAACTACTGGAGGACTACGGCACGATGATCAAGACCTA
CGATGGGGTCAGTGCCACCGCCGTTCTCTTCGAGCTGGTTTCGCACAAGA
AGGCCATTCAGGTGCCCAAGGATACCATGTCCTATTCGACCCGGGGTCCA
TGGTACAATGTGGGTTGTGCGTTCCGCTGGGAAGATCCCAGCTTGGACAA
GATAATGCGCGAGACACAGCGCGCCCTCATGCGGAAGGTTGGCGATCGTG
CCGGTGGTGGTGCCCATGCCCGAGCATATGCCAACTACTCGCATAGTGAC
GGCCGAGCAAAGGATGTCTATGGGGACAACCTGCCGCGGCTGCAGAAGCT
GAAGAAACAGTACGACCCAAAGAATGTGTTCAAGAAGTGGTTGAACCTGC
TTCCCGAGGAAGATGTTCAGATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010712CBS51388_010712Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010712-T1.exon1CBS51388_010712-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010712-T1.exon2CBS51388_010712-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010712-T1.cdsCBS51388_010712-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010712-T1CBS51388_010712-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_18.1
NoteantiSMASH:Cluster_18.2
NoteSMCOG1138:FAD linked oxidase domain protein
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR016167
DBxrefInterPro:IPR016169
DBxrefInterPro:IPR012951
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
DBxrefPFAM:PF08031
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:102163..103636 +
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