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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:249699..251032+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010773-T1 ID=CBS51388_010773-T1|Name=CBS51388_010773-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1334bp|location=Sequence derived from alignment at An18:249699..251032+ (Aspergillus niger CBS 513.88)
ATGCTGTCCCTGGCGATCCAGTCCTTGCTGTTCGAGGCAGACGCCCATGC
GGCCAGTCCGGCCCTGCAGCGTCGCTCGTCCTCGTCGGCAAGCACTGAGG
GCGAGGCTGTCATGAGCCCACTGCCGAGTTTGCAGACCAAGGGCTTGATC
GTAATCTCGGCGCTGGCCACCGTCTCCCTCATTTGTACTCTTTCCTTGTT
GACTTTCTTTACCTATCGTTTTATCTTCTGGAAACGCCACTACAAACGTT
ACATCGGTTACAATCAATATGTCGTGCTCATGTTCAATCTCATTCTGGCT
GACTTTATCCAAAGTCTGGGCTTTATCATCAGTCTGCGATGGATCCAGAC
CAACTCGGTGACCGCCTCAGATCCTGCATGCTTCCTGCAGGGAATCTGGC
TGCAGATTGGTGATCCTATGAGTGGTCTGTTTGTGCTCGCCATCGCCGCA
CATACTTTTATGCACGTCACCTTGGGCTACCAGATCTCACACCGTCTCTT
CGTCTCCATCATTTGTGGCCTGTGGCTCTTTGGGGTTATCACGACTGTCA
TCCCGATCGCAGCACACGGTCGGTACGTGTGGTATCCAGCTGTAGCCTGG
GTAAGTTGATTCTTTCTCTCACATTACTTTTTTCTCTTTCATAAGCCACT
AACATTCATCTACCCTAGTGCTGGATGACCCCCAAGTATGAGTCGATGCG
TCTGTGGACTCACTACTTCTGGATTTTCGCCTCTGAATTCTTCACCGTCG
TCCTATATGCGATCATGTTCATTCAGCTGCGCAAGAAAATCGCCGAGTCA
GCCATTCTGGGCGAGCACAACTCTGAGAGTCTGACCCGACTCAAGCGCGT
TATTTTCCACATGGCCTTGTACCCTGTGGTGTATATCTGCCTTACCTTGC
CCCTTGCCGCAGGTCGAATGGCTTCCGCCAGTGGTCATTCCCCCAGTGTG
CTCTACTTCTGCTTTGCCGGATCCTTCATGACGCTGTGTGGCTTCTGTGA
TTCCCTCATGTACACGTTGAGTCGCCGCAGCGTGGTGCTGGAGCCCGAGG
CCAGGATCCACGGCAGCAGCAACAAATATTCCAGCCGACCGAACAAATCG
TCGGTCGCACACCACTATGGAAACAGTATCGATGGCAAGGGACCGACCAA
CACGACGATTGCTCGCGGTCGCAGCGATTCCACCGAGGAGATGATCGGCA
AGGACGGGTTGGAGCTGGCCCCGATGGGAGTGGTGCTGCAGCACACGACA
ATCGAGGTCACCCATGAGGCGGCGTATGACTCGGCATCGAGCAATCTGAG
TGGCCAACGCGAGCGAAGCAGCATCTACCATTAA back to topCoding sequence (CDS) from alignment at An18:249699..251032+ >CBS51388_010773-T1 ID=CBS51388_010773-T1|Name=CBS51388_010773-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2532bp|location=Sequence derived from alignment at An18:249699..251032+ (Aspergillus niger CBS 513.88)
ATGCTGTCCCTGGCGATCCAGTCCTTGCTGTTCGAGGCAGACGCCCATGC
GGCCAGTCCGGCCCTGCAGCGTCGCTCGTCCTCGTCGGCAAGCACTGAGG
GCGAGGCTGTCATGAGCCCACTGCCGAGTTTGCAGACCAAGGGCTTGATC
GTAATCTCGGCGCTGGCCACCGTCTCCCTCATTTGTACTCTTTCCTTGTT
GACTTTCTTTACCTATCGTTTTATCTTCTGGAAACGCCACTACAAACGTT
ACATCGGTTACAATCAATATGTCGTGCTCATGTTCAATCTCATTCTGGCT
GACTTTATCCAAAGTCTGGGCTTTATCATCAGTCTGCGATGGATCCAGAC
CAACTCGGTGACCGCCTCAGATCCTGCATGCTTCCTGCAGGGAATCTGGC
TGCAGATTGGTGATCCTATGAGTGGTCTGTTTGTGCTCGCCATCGCCGCA
CATACTTTTATGCACGTCACCTTGGGCTACCAGATCTCACACCGTCTCTT
CGTCTCCATCATTTGTGGCCTGTGGCTCTTTGGGGTTATCACGACTGTCA
TCCCGATCGCAGCACACGGTCGGTACGTGTGGTATCCAGCTGTAGCCTGG
TGCTGGATGACCCCCAAGTATGAGTCGATGCGTCTGTGGACTCACTACTT
CTGGATTTTCGCCTCTGAATTCTTCACCGTCGTCCTATATGCGATCATGT
TCATTCAGCTGCGCAAGAAAATCGCCGAGTCAGCCATTCTGGGCGAGCAC
AACTCTGAGAGTCTGACCCGACTCAAGCGCGTTATTTTCCACATGGCCTT
GTACCCTGTGGTGTATATCTGCCTTACCTTGCCCCTTGCCGCAGGTCGAA
TGGCTTCCGCCAGTGGTCATTCCCCCAGTGTGCTCTACTTCTGCTTTGCC
GGATCCTTCATGACGCTGTGTGGCTTCTGTGATTCCCTCATGTACACGTT
GAGTCGCCGCAGCGTGGTGCTGGAGCCCGAGGCCAGGATCCACGGCAGCA
GCAACAAATATTCCAGCCGACCGAACAAATCGTCGGTCGCACACCACTAT
GGAAACAGTATCGATGGCAAGGGACCGACCAACACGACGATTGCTCGCGG
TCGCAGCGATTCCACCGAGGAGATGATCGGCAAGGACGGGTTGGAGCTGG
CCCCGATGGGAGTGGTGCTGCAGCACACGACAATCGAGGTCACCCATGAG
GCGGCGTATGACTCGGCATCGAGCAATCTGAGTGGCCAACGCGAGCGAAG
CAGCATCTACCATTAAATGCTGTCCCTGGCGATCCAGTCCTTGCTGTTCG
AGGCAGACGCCCATGCGGCCAGTCCGGCCCTGCAGCGTCGCTCGTCCTCG
TCGGCAAGCACTGAGGGCGAGGCTGTCATGAGCCCACTGCCGAGTTTGCA
GACCAAGGGCTTGATCGTAATCTCGGCGCTGGCCACCGTCTCCCTCATTT
GTACTCTTTCCTTGTTGACTTTCTTTACCTATCGTTTTATCTTCTGGAAA
CGCCACTACAAACGTTACATCGGTTACAATCAATATGTCGTGCTCATGTT
CAATCTCATTCTGGCTGACTTTATCCAAAGTCTGGGCTTTATCATCAGTC
TGCGATGGATCCAGACCAACTCGGTGACCGCCTCAGATCCTGCATGCTTC
CTGCAGGGAATCTGGCTGCAGATTGGTGATCCTATGAGTGGTCTGTTTGT
GCTCGCCATCGCCGCACATACTTTTATGCACGTCACCTTGGGCTACCAGA
TCTCACACCGTCTCTTCGTCTCCATCATTTGTGGCCTGTGGCTCTTTGGG
GTTATCACGACTGTCATCCCGATCGCAGCACACGGTCGGTACGTGTGGTA
TCCAGCTGTAGCCTGGTGCTGGATGACCCCCAAGTATGAGTCGATGCGTC
TGTGGACTCACTACTTCTGGATTTTCGCCTCTGAATTCTTCACCGTCGTC
CTATATGCGATCATGTTCATTCAGCTGCGCAAGAAAATCGCCGAGTCAGC
CATTCTGGGCGAGCACAACTCTGAGAGTCTGACCCGACTCAAGCGCGTTA
TTTTCCACATGGCCTTGTACCCTGTGGTGTATATCTGCCTTACCTTGCCC
CTTGCCGCAGGTCGAATGGCTTCCGCCAGTGGTCATTCCCCCAGTGTGCT
CTACTTCTGCTTTGCCGGATCCTTCATGACGCTGTGTGGCTTCTGTGATT
CCCTCATGTACACGTTGAGTCGCCGCAGCGTGGTGCTGGAGCCCGAGGCC
AGGATCCACGGCAGCAGCAACAAATATTCCAGCCGACCGAACAAATCGTC
GGTCGCACACCACTATGGAAACAGTATCGATGGCAAGGGACCGACCAACA
CGACGATTGCTCGCGGTCGCAGCGATTCCACCGAGGAGATGATCGGCAAG
GACGGGTTGGAGCTGGCCCCGATGGGAGTGGTGCTGCAGCACACGACAAT
CGAGGTCACCCATGAGGCGGCGTATGACTCGGCATCGAGCAATCTGAGTG
GCCAACGCGAGCGAAGCAGCATCTACCATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023041 |
| DBxref | InterPro:IPR022596 |
| DBxref | PFAM:PF11970 |
| DBxref | PFAM:PF11710 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:249699..251032 + |
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