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CBS51388_010808-T1, CBS51388_010808-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010808-T1
Unique NameCBS51388_010808-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:340471..342282-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010808-T1 ID=CBS51388_010808-T1|Name=CBS51388_010808-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1812bp|location=Sequence derived from alignment at An18:340471..342282- (Aspergillus niger CBS 513.88)
ATGGCAGGTTCCAAGAAACCAGTTAACATTTTTCGCTTGCGCAATCTCGC
TGACCCCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCT
TTGGCCTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGT
GCCTTTAACTCCAAGGATTTTCAGCGCACTATTCATCTGGACTCGTACAG
TGAGGTTGAACAGACCAACATCAAGGCGAATGTGTCCGCTATGGTGCAAA
TTGGTTCCGTGGGAGGGGCACTCTTGTACGCCATTCACCAAAATGAACCG
TGAAGTCTGTCTGCTGACACTGTTATAGTGCATTCCTTGTGTGCGACCGT
ATTGGACGGCTGTGGGCGACTCGCCAACTCTGCGTTCTTTGGATCCTGGG
AATTGCCATTTTCATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCT
ATGCTGGTCGCTTCGTGGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTG
GGACCAGTCTACCTGGCTGAGATCGTGAGTGACAAGTTCAATTCCCTGTC
GGGCTTGATTAACCAAAAACAGGCCCCAGCATCCGTCCGCGGGCTCTGCA
CTTGTGTCTTCACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTACTTC
ACCAACTACGGCTGCCAGATCCATATGGGCGACCACACTCACAAGCGATG
GGTAAGGCATTCATTCACCTTCTCCATGGCAATGTACTGACCCTACCTAG
GAAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCTCATCTTCCTCCT
CTCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAAAGAAAGGCAAGC
CCGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAATCTTCCTCCAGAG
CATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAATGCCCATCAGGC
GGAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCATTGTCAAGGAGG
CCATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTAGCCGCCATGGCG
CAGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCACGCTGTACGCGCC
GGATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACGAGTCCCTACTTG
TGACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCTGTGATTTGCGCT
CTGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCTACTCCTAGGAAT
CACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCTTCCTCACTGCCG
TGCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCGGAGTCAAAGAAG
GGTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTCCGGTGTGGGCTG
GGCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCGCAGAACTGTTCC
CGCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATGACGCTGCACTTT
GTCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATATGTTGCTGGGTAC
TGCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGTTCTTCTCTGCCG
TGACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTGCCTGAGACAGCG
GGGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATTGCCCTGGTATCA
AATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGGACCAGGTGGTGG
CGGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGGGCGGAGCATCGC
GAGCGGGTGTAA
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Coding sequence (CDS) from alignment at An18:340471..342282-

>CBS51388_010808-T1 ID=CBS51388_010808-T1|Name=CBS51388_010808-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5130bp|location=Sequence derived from alignment at An18:340471..342282- (Aspergillus niger CBS 513.88)
GAAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCTCATCTTCCTCCT
CTCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAAAGAAAGGCAAGC
CCGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAATCTTCCTCCAGAG
CATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAATGCCCATCAGGC
GGAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCATTGTCAAGGAGG
CCATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTAGCCGCCATGGCG
CAGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCACGCTGTACGCGCC
GGATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACGAGTCCCTACTTG
TGACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCTGTGATTTGCGCT
CTGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCTACTCCTAGGAAT
CACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCTTCCTCACTGCCG
TGCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCGGAGTCAAAGAAG
GGTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTCCGGTGTGGGCTG
GGCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCGCAGAACTGTTCC
CGCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATGACGCTGCACTTT
GTCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATATGTTGCTGGGTAC
TGCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGTTCTTCTCTGCCG
TGACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTGCCTGAGACAGCG
GGGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATTGCCCTGGTATCA
AATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGGACCAGGTGGTGG
CGGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGGGCGGAGCATCGC
GAGCGGGTGTAATGCATTCCTTGTGTGCGACCGTATTGGACGGCTGTGGG
CGACTCGCCAACTCTGCGTTCTTTGGATCCTGGGAATTGCCATTTTCATG
GGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCTATGCTGGTCGCTTCGT
GGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTGGGACCAGTCTACCTGG
CTGAGATCGTGAGTGACAAGTTCAATTCCCTGTCGGGCTTGATTAACCAA
AAACAGGCCCCAGCATCCGTCCGCGGGCTCTGCACTTGTGTCTTCACCGG
CTTCGTTTACCTGGGCATTGTGCTCGCCTACTTCACCAACTACGGCTGCC
AGATCCATATGGGCGACCACACTCACAAGCGATGGATGGCAGGTTCCAAG
AAACCAGTTAACATTTTTCGCTTGCGCAATCTCGCTGACCCCAAGGAGGT
CTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCTTTGGCCTCATGGGCG
CTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGTGCCTTTAACTCCAAG
GATTTTCAGCGCACTATTCATCTGGACTCGTACAGTGAGGTTGAACAGAC
CAACATCAAGGCGAATGTGTCCGCTATGGTGCAAATTGGTTCCGTGGGAG
GGGCACTCTTGAAGTCCCAACTAGTCTCCACATCATGTTTGCCGGCCTCA
TCTTCCTCCTCTCCTTCCTCCAATACGAGTCTCCTCGCTTCCTTGTAAAG
AAAGGCAAGCCCGAAGAAGCACTGAAGAACCTTGCGCGCCTCCGCAATCT
TCCTCCAGAGCATGAATACGTTGTCGAGGAGTTCACGGGTATCCAGAATG
CCCATCAGGCGGAGATGGAGGCTACCATGGGAGCTGGCTGGCTGGGCATT
GTCAAGGAGGCCATCATGGTCCCGAGCAACCTGTACCGGCTGTACCTAGC
CGCCATGGCGCAGCTACTGTCCCAATGGTCTGGAGCGGGATCCATCACGC
TGTACGCGCCGGATCTGTTCAGTCTCCTGGGCATCACGGGGTCCAACGAG
TCCCTACTTGTGACAGCAGTGTTCGGTATCATCAAGCTGGTCGCAGCTGT
GATTTGCGCTCTGTTCCTGGTGGATGTGATTGGGCGCAAACGTGCCCTAC
TCCTAGGAATCACGCTGCAGGCCATCTCGATGATCTACGTGGCTAGCTTC
CTCACTGCCGTGCCGGAGATGGGCATTGTCGATGACTTTGTCCTGCCGGA
GTCAAAGAAGGGTAGTAGCCGCGGAGCCATTGCTATGATCTATATCTCCG
GTGTGGGCTGGGCATTGGGCTGGAACTCCATGCAGTATCTGCTGACCGCA
GAACTGTTCCCGCTACGCATCCGCGCACTGGCTACCTCTGCTGCTATGAC
GCTGCACTTTGTCAATCAGTATGGTAATTCCCGAGCGGTGCCCAATATGT
TGCTGGGTACTGCGGAGGGTGGCATCACCCCCAAGGGCACGTTCTGGTTC
TTCTCTGCCGTGACGGTGCTGGGTGGGCTGTGGGTGTGGTTCAGTGTGCC
TGAGACAGCGGGGCGGAGTCTAGAGAGTATGGATCGGTTGTTTGCATTGC
CCTGGTATCAAATCGGACGGCATGGCAACCGTGATGCCGACCAGCAGGAC
CAGGTGGTGGCGGATAAACAACAGCAGGTGGAGGATGGATTTGGAGGGGC
GGAGCATCGCGAGCGGGTGTAATGCATTCCTTGTGTGCGACCGTATTGGA
CGGCTGTGGGCGACTCGCCAACTCTGCGTTCTTTGGATCCTGGGAATTGC
CATTTTCATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCTGTCTATGCTG
GTCGCTTCGTGGCCGGACTGGGCGTCGGCCAGACTGTAGTTGTGGGACCA
GTCTACCTGGCTGAGATCGTGAGTGACAAGTTCAATTCCCTGTCGGGCTT
GATTAACCAAAAACAGGCCCCAGCATCCGTCCGCGGGCTCTGCACTTGTG
TCTTCACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTACTTCACCAAC
TACGGCTGCCAGATCCATATGGGCGACCACACTCACAAGCGATGGATGGC
AGGTTCCAAGAAACCAGTTAACATTTTTCGCTTGCGCAATCTCGCTGACC
CCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGCCGTGCTCTCCTTTGGC
CTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTTTGATCTCGGGTGCCTT
TAACTCCAAGGATTTTCAGCGCACTATTCATCTGGACTCGTACAGTGAGG
TTGAACAGACCAACATCAAGGCGAATGTGTCCGCTATGGTGCAAATTGGT
TCCGTGGGAGGGGCACTCTTGAAGTCCCAACTAGTCTCCACATCATGTTT
GCCGGCCTCATCTTCCTCCTCTCCTTCCTCCAATACGAGTCTCCTCGCTT
CCTTGTAAAGAAAGGCAAGCCCGAAGAAGCACTGAAGAACCTTGCGCGCC
TCCGCAATCTTCCTCCAGAGCATGAATACGTTGTCGAGGAGTTCACGGGT
ATCCAGAATGCCCATCAGGCGGAGATGGAGGCTACCATGGGAGCTGGCTG
GCTGGGCATTGTCAAGGAGGCCATCATGGTCCCGAGCAACCTGTACCGGC
TGTACCTAGCCGCCATGGCGCAGCTACTGTCCCAATGGTCTGGAGCGGGA
TCCATCACGCTGTACGCGCCGGATCTGTTCAGTCTCCTGGGCATCACGGG
GTCCAACGAGTCCCTACTTGTGACAGCAGTGTTCGGTATCATCAAGCTGG
TCGCAGCTGTGATTTGCGCTCTGTTCCTGGTGGATGTGATTGGGCGCAAA
CGTGCCCTACTCCTAGGAATCACGCTGCAGGCCATCTCGATGATCTACGT
GGCTAGCTTCCTCACTGCCGTGCCGGAGATGGGCATTGTCGATGACTTTG
TCCTGCCGGAGTCAAAGAAGGGTAGTAGCCGCGGAGCCATTGCTATGATC
TATATCTCCGGTGTGGGCTGGGCATTGGGCTGGAACTCCATGCAGTATCT
GCTGACCGCAGAACTGTTCCCGCTACGCATCCGCGCACTGGCTACCTCTG
CTGCTATGACGCTGCACTTTGTCAATCAGTATGGTAATTCCCGAGCGGTG
CCCAATATGTTGCTGGGTACTGCGGAGGGTGGCATCACCCCCAAGGGCAC
GTTCTGGTTCTTCTCTGCCGTGACGGTGCTGGGTGGGCTGTGGGTGTGGT
TCAGTGTGCCTGAGACAGCGGGGCGGAGTCTAGAGAGTATGGATCGGTTG
TTTGCATTGCCCTGGTATCAAATCGGACGGCATGGCAACCGTGATGCCGA
CCAGCAGGACCAGGTGGTGGCGGATAAACAACAGCAGGTGGAGGATGGAT
TTGGAGGGGCGGAGCATCGCGAGCGGGTGTAATGCATTCCTTGTGTGCGA
CCGTATTGGACGGCTGTGGGCGACTCGCCAACTCTGCGTTCTTTGGATCC
TGGGAATTGCCATTTTCATGGGCGTCGGTGCCAACGGTAGCCTGGGGGCT
GTCTATGCTGGTCGCTTCGTGGCCGGACTGGGCGTCGGCCAGACTGTAGT
TGTGGGACCAGTCTACCTGGCTGAGATCGTGAGTGACAAGTTCAATTCCC
TGTCGGGCTTGATTAACCAAAAACAGGCCCCAGCATCCGTCCGCGGGCTC
TGCACTTGTGTCTTCACCGGCTTCGTTTACCTGGGCATTGTGCTCGCCTA
CTTCACCAACTACGGCTGCCAGATCCATATGGGCGACCACACTCACAAGC
GATGGATGGCAGGTTCCAAGAAACCAGTTAACATTTTTCGCTTGCGCAAT
CTCGCTGACCCCAAGGAGGTCTTCAACTGGAGGCTATGGTTTGCCGTGCT
CTCCTTTGGCCTCATGGGCGCTGCCCGTGGTGTTGACGAGGGTTTGATCT
CGGGTGCCTTTAACTCCAAGGATTTTCAGCGCACTATTCATCTGGACTCG
TACAGTGAGGTTGAACAGACCAACATCAAGGCGAATGTGTCCGCTATGGT
GCAAATTGGTTCCGTGGGAGGGGCACTCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010808CBS51388_010808Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010808-T1CBS51388_010808-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010808-T1.cdsCBS51388_010808-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010808-T1.exon3CBS51388_010808-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010808-T1.exon2CBS51388_010808-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010808-T1.exon1CBS51388_010808-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:340471..342282 -
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