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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:432062..433473- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010837-T1 ID=CBS51388_010837-T1|Name=CBS51388_010837-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1412bp|location=Sequence derived from alignment at An18:432062..433473- (Aspergillus niger CBS 513.88)
ATGCCTGACGTGAGTTCCGCCTCCCTCTCCGGGTTCAGCAATGGCACCCT
CTCCCACTGGCGCTCGACGCGAACAAATTCGGTCTTCTTTCACTCGATCG
CATGACGCTGACGTGACGCTTTTTCTCTACTTCTACAGGTTAAAAGAAAT
GTCAGATTGGTGACCGAGCAGCACATCGTGTACGTTGTATCCTACTAAAT
ACTCCCGGTTCCCGAGTCATTCCTGAATGAATCACCGCCGCTTCTCTTCC
TCGTCATCGCTGCCTATCCTTCTCCACCTTCTTCTCGCATCCGTCGTTGG
TCATCGCGCGATGGTTGTTCGCTGTGCGCTTGGGCTCCCAACACGGTTAC
CTCTGCAGAGAATGGCACAAGGGCAGAAGCTTGGAATGAGAAAGTCCTCC
TTGCTGACCTAGTGCGCGTCTTCGCGTCTACAGGAACAAAGACTCCGGCG
TTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTACGTTGTCAAT
GAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGTGACATACAC
GCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTACGTCACACCCTC
TGCTCTTCGCACACCCCCGATCAGCGTCCGGCCAGTGGGAACCGGACGAC
AGAGATGGTCGACTTTACAAGGGATAGGTGAAATGGGTCACTAGCGGCTG
CTGACCTCAGAATAGCCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAA
GGATGGGGTGAGTTCGATATGCAAATAGGACTCACTGCTGCCGACAAGGA
GCATTTCGTTACGCACGACCTGAACTTTGCTCAGCCCCGTTACGAATCCA
AGCACGTCATTGTGAGTAATTGGCCCTCGGTGGAACACCATTGATTGTGC
TAATTTTCTCTCTCCCGTATAGACGTTCAAGAACCCCAAGCCTGCCCTAC
TAGCCCTCCTCCGCGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTG
AAGTCGAAACGCGCCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCG
CACAGAGAAGAGTGTAAGCGACGACTCATTCTCCTCAGAGAAGAAGAAAA
TAACAATAGAAACACCTCTGACATGATCACTATCCCAGGTTGACATGGAC
AAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGT
AGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACG
ATGTTGAGCGTAAGCTACCACCACCGCCGCCCCTCGAAATTCCCATCCCA
CTAACCAATTCAATCCATAACAGAGGGAGAATTCCACGTCGACCTATATA
CGCTTCCAGACACCCTAATCAAGATGCTGTGGGATTTCACGCAGGAGAAA
GGCGCTTTGTGA back to topCoding sequence (CDS) from alignment at An18:432062..433473- >CBS51388_010837-T1 ID=CBS51388_010837-T1|Name=CBS51388_010837-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4893bp|location=Sequence derived from alignment at An18:432062..433473- (Aspergillus niger CBS 513.88)
AGGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAG
ATGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGA
CAAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGG
TAGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAAC
GATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCC
GCGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGC
GCCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAG
TCCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTT
CGATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGC
ACGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAA
CAAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGA
TCTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGAT
AAAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAG
TTAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACA
GGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGA
TGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGAC
AAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGT
AGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACG
ATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCG
CGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCG
CCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGT
CCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTC
GATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCA
CGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAAC
AAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGAT
CTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATA
AAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGT
TAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAG
GGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGAT
GCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACA
AGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTA
GTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGA
TGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGC
GAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGC
CGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTC
CTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCG
ATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCAC
GACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACA
AAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATC
TACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAA
AGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTT
AAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGG
GAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATG
CTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAA
GCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAG
TACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGAT
GTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCG
AATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCC
GCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCC
TTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGA
TATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACG
ACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAA
AGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCT
ACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAA
GTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTA
AAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGG
AGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGC
TGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAG
CTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGT
ACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATG
TTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGA
ATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCG
CAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCT
TCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGAT
ATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGA
CCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAA
GACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTA
CGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAG
TGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAA
AAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGA
GAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCT
GTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGC
TGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTA
CAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGT
TGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAA
TCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGC
AGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTT
CAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATA
TGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGAC
CTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAG
ACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTAC
GTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGT
GACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAA
AGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGAG
AATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCTG
TGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGCT
GGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTAC
AGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGTT
GAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAAT
CCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGCA
GCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTTC
AAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATAT
GCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGACC
TGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAGA
CTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTACG
TTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGTG
ACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAAA
GAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005033 |
| DBxref | InterPro:IPR016665 |
| DBxref | InterPro:IPR038704 |
| DBxref | PFAM:PF03366 |
| DBxref | PFAM:PF17035 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:432062..433473 - |
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