|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:451911..452681+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010843-T1 ID=CBS51388_010843-T1|Name=CBS51388_010843-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=771bp|location=Sequence derived from alignment at An18:451911..452681+ (Aspergillus niger CBS 513.88)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTGTATGTCGATCACCC
TCACTTTCTGGGGTAGTTCACATTCCCGGAAGTATTCTGACCCTTCTCTG
ACTATTATGACCAAAATCATTAGATACCCAACTGGCCGATCGCACGGTTC
ACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCG
CAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCAAAACGCCGAC
AGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTCCTAGCAACAC
GTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAG
CTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCA
GGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCTCATCTTCAAC
TACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTG
GAGGTTTGCTGCTCCGTTACCTCCTTTTGTGACTCCTTCTGCTGTTGCTG
ACACCACTTTAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAACT
GAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGATC
TCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAAC
GCTGCCTCTGAGTTCTCATAG back to topCoding sequence (CDS) from alignment at An18:451911..452681+ >CBS51388_010843-T1 ID=CBS51388_010843-T1|Name=CBS51388_010843-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1872bp|location=Sequence derived from alignment at An18:451911..452681+ (Aspergillus niger CBS 513.88)
ATGGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCG
ACGAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCG
ATCGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGAT
CCGGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAG
CAAAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTC
TCCTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAA
CTGCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAA
GAGAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTG
CTCATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAG
GCAAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCA
ACTGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAG
ATCTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATG
AACGCTGCCTCTGAGTTCTCATAGATGGCCCACTGGAAAGAGGAGTACTC
CGCCGCGCTGGCGGCTCGTGATCGACGAGAGAAAGCCAGCATAGCTATCT
ACGATGCTTATACCCAACTGGCCGATCGCACGGTTCACATAGGAGCAACG
GCTAGCAACCCACAGAGATCAGATCCGGTTGAAGCGCAGCATGTGCCACC
CGACACTTCAGCATCCCGCTCCAGCAAAACGCCGACAGGAGCAGGCGCAC
AAGACCCATCTTTACAGGAGACTCTCCTAGCAACACGTGCAGACCTGGCA
GAGGCACAGCGGTCACGCTCCGAACTGCAGGACCAGCTCACACGCATGAC
CACTGACCTAGAGAAGCTGCGGAAGAGAAGCACTCAGGATAGCAGACGGA
TCCGCTTATTCGAAACCGAGATTGCTCATCTTCAACTACGTTTGAAGGAT
CGAGATGAAGAGTTGCGTGGGAAGGCAAAGCTACTGGAGGATTTCCAAGA
CGAGCTGGCATCGTTGAATCTTCAACTGAATATGGCTGAAGAACGGTCAT
CCCGACTGCAGAAAGAGAACCAAGATCTCGTTGATCGCTGGATGGCTAGA
ATGGGTAGGGAAGCAGAAGCCATGAACGCTGCCTCTGAGTTCTCATAGAT
GGCCCACTGGAAAGAGGAGTACTCCGCCGCGCTGGCGGCTCGTGATCGAC
GAGAGAAAGCCAGCATAGCTATCTACGATGCTTATACCCAACTGGCCGAT
CGCACGGTTCACATAGGAGCAACGGCTAGCAACCCACAGAGATCAGATCC
GGTTGAAGCGCAGCATGTGCCACCCGACACTTCAGCATCCCGCTCCAGCA
AAACGCCGACAGGAGCAGGCGCACAAGACCCATCTTTACAGGAGACTCTC
CTAGCAACACGTGCAGACCTGGCAGAGGCACAGCGGTCACGCTCCGAACT
GCAGGACCAGCTCACACGCATGACCACTGACCTAGAGAAGCTGCGGAAGA
GAAGCACTCAGGATAGCAGACGGATCCGCTTATTCGAAACCGAGATTGCT
CATCTTCAACTACGTTTGAAGGATCGAGATGAAGAGTTGCGTGGGAAGGC
AAAGCTACTGGAGGATTTCCAAGACGAGCTGGCATCGTTGAATCTTCAAC
TGAATATGGCTGAAGAACGGTCATCCCGACTGCAGAAAGAGAACCAAGAT
CTCGTTGATCGCTGGATGGCTAGAATGGGTAGGGAAGCAGAAGCCATGAA
CGCTGCCTCTGAGTTCTCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013923 |
| DBxref | PFAM:PF08614 |
| Product | interacts with Atg12p-Atg5p |
| Product | autophagy protein 16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:451911..452681 + |
|
