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CBS51388_010856-T1, CBS51388_010856-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010856-T1
Unique NameCBS51388_010856-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:494499..495984+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010856-T1 ID=CBS51388_010856-T1|Name=CBS51388_010856-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1486bp|location=Sequence derived from alignment at An18:494499..495984+ (Aspergillus niger CBS 513.88)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAAGACTAAAGGCGGCTGTTGAG
TGCCTGCTTGATGAACTTCGCCGGGGGACTGAACGACAGCGCACCTGGGG
CCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCTATCGTG
TCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGCCCCTTT
GGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATTCTTTGT
CAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAGCCACCC
TTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCATGGCCAT
CAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATAGCACTG
CAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATCATAGCA
CCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTCCTACTT
CTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCTCCGCTT
GGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTGACGGCG
CTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGCGGCCAG
ACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCCTTGGGG
CTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCAGGCTGG
GTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAGGGTTGG
CTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGTTCGTCC
TGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATCCTACTG
GTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCCCAACAT
CATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGGGACCAG
TGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGCTCGATG
CAGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGGGGGAGC
TGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCACGTACG
TCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTGGGGTGG
CTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA
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Coding sequence (CDS) from alignment at An18:494499..495984+

>CBS51388_010856-T1 ID=CBS51388_010856-T1|Name=CBS51388_010856-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2892bp|location=Sequence derived from alignment at An18:494499..495984+ (Aspergillus niger CBS 513.88)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAAGACTAAAGGCGGCTGTTGAC
GCACCTGGGGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATA
TGCTATCGTGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTG
CTGCCCCTTTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACT
TATTCTTTGTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTG
CAAGCCACCCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCG
GCATGGCCATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTG
AATAGCACTGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGG
CATCATAGCACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAAT
GGTCCTACTTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTG
TTCTCCGCTTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTT
ATTGACGGCGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCC
AAGCGGCCAGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACT
CTCCTTGGGGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGAT
TTCAGGCTGGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCT
CAAGGGTTGGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGA
CGGTTCGTCCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGT
CATCCTACTGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCA
TTCCCAACATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTA
CTGGGACCAGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCC
GCGCTCGATGCAGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCA
GTGGGGGAGCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTG
AGCACGTACGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCT
CGTGGGGTGGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAAATGT
CGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATTAATA
ACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTTATGC
TCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAGACCG
CTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAGCCCT
GGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGGACTC
CATTCCCGCAATACAGAGTCCACCAAGACTAAAGGCGGCTGTTGACGCAC
CTGGGGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCT
ATCGTGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGC
CCCTTTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATT
CTTTGTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAG
CCACCCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCAT
GGCCATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATA
GCACTGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATC
ATAGCACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTC
CTACTTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCT
CCGCTTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTG
ACGGCGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGC
GGCCAGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCC
TTGGGGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCA
GGCTGGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAG
GGTTGGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGT
TCGTCCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATC
CTACTGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCC
CAACATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGG
GACCAGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGC
TCGATGCAGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGG
GGGAGCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCA
CGTACGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTG
GGGTGGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010856CBS51388_010856Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010856-T1.exon1CBS51388_010856-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010856-T1.exon2CBS51388_010856-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010856-T1.cdsCBS51388_010856-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010856-T1CBS51388_010856-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:494499..495984 +
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