|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:542074..544279- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010869-T1 ID=CBS51388_010869-T1|Name=CBS51388_010869-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2206bp|location=Sequence derived from alignment at An18:542074..544279- (Aspergillus niger CBS 513.88)
ATGCTTGCGAATGAGGTCAAAGAGCGATCAATGAGCTCAATCACCCACTA
CCGCAGCCCAACATGCCCATTCTGTGACCTTATTGCTAGCGCAAAAAAGC
TCGCCTCAGCTGATGGATGGGACCTGACCACCACCAAACCATCCCCTCGC
CTCTTCATCCAGAGCCGGAGTCCGATGTCTGTGAAAATTAATGAATACAC
GGAATACCCTAGTCCGCGATTACTGCTTGCAGTCGACCATAAGACGGATC
ATCAGCAGAATCGCCGGCCACTTCGCGAGATTGATCGGGTGAAGCGCAAC
AGGTACATTCTGGCCGAGATTGAACAAGTACCCAGCAGCCCCCTGAATGA
TAGCAAGAGGGAGTTCATCCGAAGACGGAGTATTCTACCCCAATTAAATA
TTCCTCTGATACAAGACTGGCTGTTACGATGCAGAACACACAAGCACTCG
GCCAGAACACCCAAGATCGGCACTGGACCATTTGATGGCCACCCTTTCCG
GTTGATCGATGTGACACGAGAATGCGTGACACTTCAGATGGAGAGGTGTG
ATTATGTGGCATTATCCTATGTCTGGGGTAACTCCCCCACCATCCTGGAT
CCTGGCCACGAAAATGGAAGCCAGATTCTAGTCGCCACTCAACATAACTT
GTCACTGCTGTGTCGTCCACATGCCCTTTCGGAATCAGGCCGTAAGCTGG
GGAAGATTCCTCGTACAGTTTCCGACGCCATGGAGCTAGCTCGCAAGATT
GGTATTCGATATTTCTGGGTAGATACGCTGTGCATTGTGCAGGATGATGA
GCAAGACAAGTCGCGGCTAATCAGCCACATGGACGACATCTATGATAATG
CAACCATCACGATCATGGCCTCAGCGGGTGATAGTCCAGATGCAGGTTTG
CCAGGCATCAGTCCACGGGCAGGTTTTCCGATTGAGTCATACAGTATACC
GGACGAAACAAATGGGCAGGTCCTGGCCTTGTCCCTTTCTCTGCCATCTT
TGTGTCATGAAGTGCGGAAGGGTATGTGGAACACTCGTGGATGGACATTC
CAGGAACAAAGTCTGTCACAGCGCTGCCTGTACTTGACAATGAACGAGAC
CTTTTTCCAGTGTCCAGAGGCTCAATGGAGAGAGGGGTATGACTACGAGG
ACGGAAGCGCATCAGAAGCACGAATTCAGATTCGCACTGGGCCTCCATGG
TGGAGTAATAGGCTCAGGAAAGATCCGGACCCTACCCCTTATCATTACCT
TGGCGATCCACACAATGGATTGGACGCTGAAAGCTACCAACAAGCTGTTC
AAGAGTATAGCCGAAGACACCTGAGACATCCTGAAGACATACTCAATGCC
TTTGAGGGGATCTTCAACCGGTTCCAGCAGATGCAGGAGGGTTCCGGTGA
CCTAAATATTCGCCAAGCTCAAGGCATCCCGCCCCATCTCACGGCGCAGG
CATTACTGTGGTTTCCATCCGACACATGCCAGCAACGCGACTCAGCGGAG
AGATTCTCCACCTGGTCCTGGTAGGCAGATATCCTTATATAGATGGTTGT
GGCTAACAAGTGGCAGGGCCTCATGGATTGGTCCTATAGAATTCATTTTC
GCGGAAAGCCTTTGGTTGTCGAGGAGCATCTCGCACGCTCCTCGAAAAAA
TTACCCCTTGCACACAGCAGTTGTCCAATGGCACTTTGGTGGTGCGAGCA
GTAGCGTCTGGTCGCACCGTCTGTGGCAGGCTGCAGAGAATGTCCGAAAC
CACAAAGAAAAGCACAAGCTCAATGAATATCGGACCACGCGAAAGTTTCT
CAACGACGTCGTCGGAATTCAAGTAAAAAGACTTCTAGACAAATCTCTTA
ATTCAGTTCTGGCCAGTCTTGGGTGTGGCCAACTGGGCTTTATTGGTGCA
TACTTGGGCTCTAGTGACTTTGACATCGCTGACGCCGTCACGGAGCGGAC
TCAGCCCTTAGTCGTGTCTGGAGTTCATGCAGGGCAGTTCAAATATGATG
GCAACACTGTCGTACCGGTGACCGAGCTGGTGATTATCTTGTGTACGAAC
ACTATCATGGGTTCGCCGCGAACAGTCATGGTATTCTTAGGTATGGCCAC
ACAGGATGGAGTCTCTGTCCGTGTGGGAGTGGGATATACGTACCTTTCCA
AGGATACAGGGGCGCCCAAACCACGCTGGGATTATAGATTCTTTGTCGTG
AATTAA back to topCoding sequence (CDS) from alignment at An18:542074..544279- >CBS51388_010869-T1 ID=CBS51388_010869-T1|Name=CBS51388_010869-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4320bp|location=Sequence derived from alignment at An18:542074..544279- (Aspergillus niger CBS 513.88)
GGCCTCATGGATTGGTCCTATAGAATTCATTTTCGCGGAAAGCCTTTGGT
TGTCGAGGAGCATCTCGCACGCTCCTCGAAAAAATTACCCCTTGCACACA
GCAGTTGTCCAATGGCACTTTGGTGGTGCGAGCAGTAGCGTCTGGTCGCA
CCGTCTGTGGCAGGCTGCAGAGAATGTCCGAAACCACAAAGAAAAGCACA
AGCTCAATGAATATCGGACCACGCGAAAGTTTCTCAACGACGTCGTCGGA
ATTCAAGTAAAAAGACTTCTAGACAAATCTCTTAATTCAGTTCTGGCCAG
TCTTGGGTGTGGCCAACTGGGCTTTATTGGTGCATACTTGGGCTCTAGTG
ACTTTGACATCGCTGACGCCGTCACGGAGCGGACTCAGCCCTTAGTCGTG
TCTGGAGTTCATGCAGGGCAGTTCAAATATGATGGCAACACTGTCGTACC
GGTGACCGAGCTGGTGATTATCTTGTGTACGAACACTATCATGGGTTCGC
CGCGAACAGTCATGGTATTCTTAGGTATGGCCACACAGGATGGAGTCTCT
GTCCGTGTGGGAGTGGGATATACGTACCTTTCCAAGGATACAGGGGCGCC
CAAACCACGCTGGGATTATAGATTCTTTGTCGTGAATTAAATGCTTGCGA
ATGAGGTCAAAGAGCGATCAATGAGCTCAATCACCCACTACCGCAGCCCA
ACATGCCCATTCTGTGACCTTATTGCTAGCGCAAAAAAGCTCGCCTCAGC
TGATGGATGGGACCTGACCACCACCAAACCATCCCCTCGCCTCTTCATCC
AGAGCCGGAGTCCGATGTCTGTGAAAATTAATGAATACACGGAATACCCT
AGTCCGCGATTACTGCTTGCAGTCGACCATAAGACGGATCATCAGCAGAA
TCGCCGGCCACTTCGCGAGATTGATCGGGTGAAGCGCAACAGGTACATTC
TGGCCGAGATTGAACAAGTACCCAGCAGCCCCCTGAATGATAGCAAGAGG
GAGTTCATCCGAAGACGGAGTATTCTACCCCAATTAAATATTCCTCTGAT
ACAAGACTGGCTGTTACGATGCAGAACACACAAGCACTCGGCCAGAACAC
CCAAGATCGGCACTGGACCATTTGATGGCCACCCTTTCCGGTTGATCGAT
GTGACACGAGAATGCGTGACACTTCAGATGGAGAGGTGTGATTATGTGGC
ATTATCCTATGTCTGGGGTAACTCCCCCACCATCCTGGATCCTGGCCACG
AAAATGGAAGCCAGATTCTAGTCGCCACTCAACATAACTTGTCACTGCTG
TGTCGTCCACATGCCCTTTCGGAATCAGGCCGTAAGCTGGGGAAGATTCC
TCGTACAGTTTCCGACGCCATGGAGCTAGCTCGCAAGATTGGTATTCGAT
ATTTCTGGGTAGATACGCTGTGCATTGTGCAGGATGATGAGCAAGACAAG
TCGCGGCTAATCAGCCACATGGACGACATCTATGATAATGCAACCATCAC
GATCATGGCCTCAGCGGGTGATAGTCCAGATGCAGGTTTGCCAGGCATCA
GTCCACGGGCAGGTTTTCCGATTGAGTCATACAGTATACCGGACGAAACA
AATGGGCAGGTCCTGGCCTTGTCCCTTTCTCTGCCATCTTTGTGTCATGA
AGTGCGGAAGGGTATGTGGAACACTCGTGGATGGACATTCCAGGAACAAA
GTCTGTCACAGCGCTGCCTGTACTTGACAATGAACGAGACCTTTTTCCAG
TGTCCAGAGGCTCAATGGAGAGAGGGGTATGACTACGAGGACGGAAGCGC
ATCAGAAGCACGAATTCAGATTCGCACTGGGCCTCCATGGTGGAGTAATA
GGCTCAGGAAAGATCCGGACCCTACCCCTTATCATTACCTTGGCGATCCA
CACAATGGATTGGACGCTGAAAGCTACCAACAAGCTGTTCAAGAGTATAG
CCGAAGACACCTGAGACATCCTGAAGACATACTCAATGCCTTTGAGGGGA
TCTTCAACCGGTTCCAGCAGATGCAGGAGGGTTCCGGTGACCTAAATATT
CGCCAAGCTCAAGGCATCCCGCCCCATCTCACGGCGCAGGCATTACTGTG
GTTTCCATCCGACACATGCCAGCAACGCGACTCAGCGGAGAGATTCTCCA
CCTGGTCCTGGGCCTCATGGATTGGTCCTATAGAATTCATTTTCGCGGAA
AGCCTTTGGTTGTCGAGGAGCATCTCGCACGCTCCTCGAAAAAATTACCC
CTTGCACACAGCAGTTGTCCAATGGCACTTTGGTGGTGCGAGCAGTAGCG
TCTGGTCGCACCGTCTGTGGCAGGCTGCAGAGAATGTCCGAAACCACAAA
GAAAAGCACAAGCTCAATGAATATCGGACCACGCGAAAGTTTCTCAACGA
CGTCGTCGGAATTCAAGTAAAAAGACTTCTAGACAAATCTCTTAATTCAG
TTCTGGCCAGTCTTGGGTGTGGCCAACTGGGCTTTATTGGTGCATACTTG
GGCTCTAGTGACTTTGACATCGCTGACGCCGTCACGGAGCGGACTCAGCC
CTTAGTCGTGTCTGGAGTTCATGCAGGGCAGTTCAAATATGATGGCAACA
CTGTCGTACCGGTGACCGAGCTGGTGATTATCTTGTGTACGAACACTATC
ATGGGTTCGCCGCGAACAGTCATGGTATTCTTAGGTATGGCCACACAGGA
TGGAGTCTCTGTCCGTGTGGGAGTGGGATATACGTACCTTTCCAAGGATA
CAGGGGCGCCCAAACCACGCTGGGATTATAGATTCTTTGTCGTGAATTAA
ATGCTTGCGAATGAGGTCAAAGAGCGATCAATGAGCTCAATCACCCACTA
CCGCAGCCCAACATGCCCATTCTGTGACCTTATTGCTAGCGCAAAAAAGC
TCGCCTCAGCTGATGGATGGGACCTGACCACCACCAAACCATCCCCTCGC
CTCTTCATCCAGAGCCGGAGTCCGATGTCTGTGAAAATTAATGAATACAC
GGAATACCCTAGTCCGCGATTACTGCTTGCAGTCGACCATAAGACGGATC
ATCAGCAGAATCGCCGGCCACTTCGCGAGATTGATCGGGTGAAGCGCAAC
AGGTACATTCTGGCCGAGATTGAACAAGTACCCAGCAGCCCCCTGAATGA
TAGCAAGAGGGAGTTCATCCGAAGACGGAGTATTCTACCCCAATTAAATA
TTCCTCTGATACAAGACTGGCTGTTACGATGCAGAACACACAAGCACTCG
GCCAGAACACCCAAGATCGGCACTGGACCATTTGATGGCCACCCTTTCCG
GTTGATCGATGTGACACGAGAATGCGTGACACTTCAGATGGAGAGGTGTG
ATTATGTGGCATTATCCTATGTCTGGGGTAACTCCCCCACCATCCTGGAT
CCTGGCCACGAAAATGGAAGCCAGATTCTAGTCGCCACTCAACATAACTT
GTCACTGCTGTGTCGTCCACATGCCCTTTCGGAATCAGGCCGTAAGCTGG
GGAAGATTCCTCGTACAGTTTCCGACGCCATGGAGCTAGCTCGCAAGATT
GGTATTCGATATTTCTGGGTAGATACGCTGTGCATTGTGCAGGATGATGA
GCAAGACAAGTCGCGGCTAATCAGCCACATGGACGACATCTATGATAATG
CAACCATCACGATCATGGCCTCAGCGGGTGATAGTCCAGATGCAGGTTTG
CCAGGCATCAGTCCACGGGCAGGTTTTCCGATTGAGTCATACAGTATACC
GGACGAAACAAATGGGCAGGTCCTGGCCTTGTCCCTTTCTCTGCCATCTT
TGTGTCATGAAGTGCGGAAGGGTATGTGGAACACTCGTGGATGGACATTC
CAGGAACAAAGTCTGTCACAGCGCTGCCTGTACTTGACAATGAACGAGAC
CTTTTTCCAGTGTCCAGAGGCTCAATGGAGAGAGGGGTATGACTACGAGG
ACGGAAGCGCATCAGAAGCACGAATTCAGATTCGCACTGGGCCTCCATGG
TGGAGTAATAGGCTCAGGAAAGATCCGGACCCTACCCCTTATCATTACCT
TGGCGATCCACACAATGGATTGGACGCTGAAAGCTACCAACAAGCTGTTC
AAGAGTATAGCCGAAGACACCTGAGACATCCTGAAGACATACTCAATGCC
TTTGAGGGGATCTTCAACCGGTTCCAGCAGATGCAGGAGGGTTCCGGTGA
CCTAAATATTCGCCAAGCTCAAGGCATCCCGCCCCATCTCACGGCGCAGG
CATTACTGTGGTTTCCATCCGACACATGCCAGCAACGCGACTCAGCGGAG
AGATTCTCCACCTGGTCCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:542074..544279 - |
|
