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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:565674..567548- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010877-T1 ID=CBS51388_010877-T1|Name=CBS51388_010877-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An18:565674..567548- (Aspergillus niger CBS 513.88)
ATGGCTGCCTCCTCCACAGGTGATCCCAGGATAACTACCAAGTCAGAACA
AGATGCCAACAGTTCTGCGCAAGGCCAGCATGCGGTCAATACTGAAGTCA
ACAATGAACTGCCAGAAACGAACCCAAACGCGATGCACGGCTTCAAGCTC
TTTGCCATTTTTGTAGGCATATGCTTCGGCGCGTTTCTGATGTCATTGGA
TATTTTCATCATCGCAACTGTACTACTCCGACTTCCTTCTTAATCTATGT
TGTAGTTGACCACGGCTAGGCCATTCCATCCATTACAGCCGACTTCCATG
ATACCGCCCAACTGGCCTGGTATCCAGCTGCGTACTCGCTCACAACATGC
GCATTGACTCCGCTAGCAGGGAAGTTGAGCTCAATGTTTCCGCTCCGTTG
GATCTATGTCTCCTTCTTCTCTATATTCCTGATTGGCAGCCTCGTGTGCG
GCTTTGCGCCAAACAGCAACACCTTCATCGCGGGTCGCGCAATAGCTGGT
ATCGGGGCATCCGGTGTCGCAAGTGGCGGCTTCGTTATCGTCCTGACCGT
ATCCCCGGAAAAGTCAAAGCCAGTGCTGCTCGGAATATGCAGCAGTTGCT
TCGCTATGGGCCTTATCCTAGCACCCGTCATTGGTGGAGCATTTACGCAG
TACGCTACTTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCT
GACATTGCTGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCG
ACCGGACTGCTGTCCAACGGATCATCGACTTGGATCTCATCGGTTGTGCT
ATTTTCATTCCGGGTATCTTCATGCTTCTTCTTGCTATGATGTGGGGCGG
TACAAAAGAGTCGTGGGACTCAGCGACGACCATTGGCCTATTTGTAGGAT
CTGCCGTCATGCTTATCATCTTTGTTTCCTGGGAAGGCTATAAGGGTGAG
GACGCAATGATACCGGGTAATATGGTTGCCAGACGGACAATCACCTTTAG
TGTCGTGTTCTCATTCTTCCATTTCGGTTCTGTCGGTATTATGAATTACT
ATCTTCCTGAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGT
GGCACGCGAACTCTGGCTTCGGTGCTCGCTCAAATAGTCGGGACCCTGTC
TGCTGGATTTCTAGGTATGATGCCCCACGGTAGCTGCTATCTTGAAATGG
CTGTTAAGCACAAGCTAACACTAAGCATTGACAGCACGCAAAATACACTA
CTACAACCCTTGGCTGTACATCGGCCCCCTCTTCATGTGCACTGCAGCAG
CACTATACACACACTTCTCGACCTTTCACACCCCATCCAGCCAATGGATC
GGCTTCCAAGTCATTCAGGGTCTTGGTGTCGGCATGGCACAGCAAATGCC
ATCGCTCATCATCCAGCATTCCGTGCGCGACAAACCAGAGCTCATGCCGG
CCGCGATATCTCTGAACCTATTCTTCCAGTACTTAGGGGCCACTATCACG
CAATCCCTTGGCGGTATCGTATTTCGCTCAATCCTACTCCCGGAATTGGC
AGACCATGCTGGTTTGAATGCTGATCAAATCGCGCTGGTGTCCGCTGCTG
GAATGGCGGATGTACGTGATACCGTTGACAAATATTTTCCCAATCTGTTA
GATCTCGTTCTGGAAGCTTATAATAAGGCTATTACTTCAACTTTTGTGAG
TGATTCTCTCTATGCAGCCACTGTGATGAAAGTGGAACTAATAAAATGGG
CATGTCAGTATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGCT
TTTGGGGTGAAGTGGGAGAGAATTACTGAGAAAGCGACAAATGGTCCGGA
AGAGGCCGTAGCTGAAGAGAAGTAG back to topCoding sequence (CDS) from alignment at An18:565674..567548- >CBS51388_010877-T1 ID=CBS51388_010877-T1|Name=CBS51388_010877-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6540bp|location=Sequence derived from alignment at An18:565674..567548- (Aspergillus niger CBS 513.88)
TATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGCTTTTGGGGT
GAAGTGGGAGAGAATTACTGAGAAAGCGACAAATGGTCCGGAAGAGGCCG
TAGCTGAAGAGAAGTAGCACGCAAAATACACTACTACAACCCTTGGCTGT
ACATCGGCCCCCTCTTCATGTGCACTGCAGCAGCACTATACACACACTTC
TCGACCTTTCACACCCCATCCAGCCAATGGATCGGCTTCCAAGTCATTCA
GGGTCTTGGTGTCGGCATGGCACAGCAAATGCCATCGCTCATCATCCAGC
ATTCCGTGCGCGACAAACCAGAGCTCATGCCGGCCGCGATATCTCTGAAC
CTATTCTTCCAGTACTTAGGGGCCACTATCACGCAATCCCTTGGCGGTAT
CGTATTTCGCTCAATCCTACTCCCGGAATTGGCAGACCATGCTGGTTTGA
ATGCTGATCAAATCGCGCTGGTGTCCGCTGCTGGAATGGCGGATGTACGT
GATACCGTTGACAAATATTTTCCCAATCTGTTAGATCTCGTTCTGGAAGC
TTATAATAAGGCTATTACTTCAACTTTTGCCATTCCATCCATTACAGCCG
ACTTCCATGATACCGCCCAACTGGCCTGGTATCCAGCTGCGTACTCGCTC
ACAACATGCGCATTGACTCCGCTAGCAGGGAAGTTGAGCTCAATGTTTCC
GCTCCGTTGGATCTATGTCTCCTTCTTCTCTATATTCCTGATTGGCAGCC
TCGTGTGCGGCTTTGCGCCAAACAGCAACACCTTCATCGCGGGTCGCGCA
ATAGCTGGTATCGGGGCATCCGGTGTCGCAAGTGGCGGCTTCGTTATCGT
CCTGACCGTATCCCCGGAAAAGTCAAAGCCAGTGCTGCTCGGAATATGCA
GCAGTTGCTTCGCTATGGGCCTTATCCTAGCACCCGTCATTGGTGGAGCA
TTTACGCAGTACGCTACTTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCC
TGGTGCTCTGACATTGCTGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAA
TACAGCGCGACCGGACTGCTGTCCAACGGATCATCGACTTGGATCTCATC
GGTTGTGCTATTTTCATTCCGGGTATCTTCATGCTTCTTCTTGCTATGAT
GTGGGGCGGTACAAAAGAGTCGTGGGACTCAGCGACGACCATTGGCCTAT
TTGTAGGATCTGCCGTCATGCTTATCATCTTTGTTTCCTGGGAAGGCTAT
AAGGGTGAGGACGCAATGATACCGGGTAATATGGTTGCCAGACGGACAAT
CACCTTTAGTGTCGTGTTCTCATTCTTCCATTTCGGTTCTGTCGGTATTA
TGAATTACTATCTTCCTGAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCG
TTGGAAAGTGGCACGCGAACTCTGGCTTCGGTGCTCGCTCAAATAGTCGG
GACCCTGTCTGCTGGATTTCTAGATGGCTGCCTCCTCCACAGGTGATCCC
AGGATAACTACCAAGTCAGAACAAGATGCCAACAGTTCTGCGCAAGGCCA
GCATGCGGTCAATACTGAAGTCAACAATGAACTGCCAGAAACGAACCCAA
ACGCGATGCACGGCTTCAAGCTCTTTGCCATTTTTTATGTTGCTGTTGGG
ACTACAGCTGCGGCGTTCTGCTTGGCTTTTGGGGTGAAGTGGGAGAGAAT
TACTGAGAAAGCGACAAATGGTCCGGAAGAGGCCGTAGCTGAAGAGAAGT
AGCACGCAAAATACACTACTACAACCCTTGGCTGTACATCGGCCCCCTCT
TCATGTGCACTGCAGCAGCACTATACACACACTTCTCGACCTTTCACACC
CCATCCAGCCAATGGATCGGCTTCCAAGTCATTCAGGGTCTTGGTGTCGG
CATGGCACAGCAAATGCCATCGCTCATCATCCAGCATTCCGTGCGCGACA
AACCAGAGCTCATGCCGGCCGCGATATCTCTGAACCTATTCTTCCAGTAC
TTAGGGGCCACTATCACGCAATCCCTTGGCGGTATCGTATTTCGCTCAAT
CCTACTCCCGGAATTGGCAGACCATGCTGGTTTGAATGCTGATCAAATCG
CGCTGGTGTCCGCTGCTGGAATGGCGGATGTACGTGATACCGTTGACAAA
TATTTTCCCAATCTGTTAGATCTCGTTCTGGAAGCTTATAATAAGGCTAT
TACTTCAACTTTTGCCATTCCATCCATTACAGCCGACTTCCATGATACCG
CCCAACTGGCCTGGTATCCAGCTGCGTACTCGCTCACAACATGCGCATTG
ACTCCGCTAGCAGGGAAGTTGAGCTCAATGTTTCCGCTCCGTTGGATCTA
TGTCTCCTTCTTCTCTATATTCCTGATTGGCAGCCTCGTGTGCGGCTTTG
CGCCAAACAGCAACACCTTCATCGCGGGTCGCGCAATAGCTGGTATCGGG
GCATCCGGTGTCGCAAGTGGCGGCTTCGTTATCGTCCTGACCGTATCCCC
GGAAAAGTCAAAGCCAGTGCTGCTCGGAATATGCAGCAGTTGCTTCGCTA
TGGGCCTTATCCTAGCACCCGTCATTGGTGGAGCATTTACGCAGTACGCT
ACTTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCTGACATT
GCTGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCGACCGGA
CTGCTGTCCAACGGATCATCGACTTGGATCTCATCGGTTGTGCTATTTTC
ATTCCGGGTATCTTCATGCTTCTTCTTGCTATGATGTGGGGCGGTACAAA
AGAGTCGTGGGACTCAGCGACGACCATTGGCCTATTTGTAGGATCTGCCG
TCATGCTTATCATCTTTGTTTCCTGGGAAGGCTATAAGGGTGAGGACGCA
ATGATACCGGGTAATATGGTTGCCAGACGGACAATCACCTTTAGTGTCGT
GTTCTCATTCTTCCATTTCGGTTCTGTCGGTATTATGAATTACTATCTTC
CTGAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGTGGCACG
CGAACTCTGGCTTCGGTGCTCGCTCAAATAGTCGGGACCCTGTCTGCTGG
ATTTCTAGATGGCTGCCTCCTCCACAGGTGATCCCAGGATAACTACCAAG
TCAGAACAAGATGCCAACAGTTCTGCGCAAGGCCAGCATGCGGTCAATAC
TGAAGTCAACAATGAACTGCCAGAAACGAACCCAAACGCGATGCACGGCT
TCAAGCTCTTTGCCATTTTTTATGTTGCTGTTGGGACTACAGCTGCGGCG
TTCTGCTTGGCTTTTGGGGTGAAGTGGGAGAGAATTACTGAGAAAGCGAC
AAATGGTCCGGAAGAGGCCGTAGCTGAAGAGAAGTAGCACGCAAAATACA
CTACTACAACCCTTGGCTGTACATCGGCCCCCTCTTCATGTGCACTGCAG
CAGCACTATACACACACTTCTCGACCTTTCACACCCCATCCAGCCAATGG
ATCGGCTTCCAAGTCATTCAGGGTCTTGGTGTCGGCATGGCACAGCAAAT
GCCATCGCTCATCATCCAGCATTCCGTGCGCGACAAACCAGAGCTCATGC
CGGCCGCGATATCTCTGAACCTATTCTTCCAGTACTTAGGGGCCACTATC
ACGCAATCCCTTGGCGGTATCGTATTTCGCTCAATCCTACTCCCGGAATT
GGCAGACCATGCTGGTTTGAATGCTGATCAAATCGCGCTGGTGTCCGCTG
CTGGAATGGCGGATGTACGTGATACCGTTGACAAATATTTTCCCAATCTG
TTAGATCTCGTTCTGGAAGCTTATAATAAGGCTATTACTTCAACTTTTGC
CATTCCATCCATTACAGCCGACTTCCATGATACCGCCCAACTGGCCTGGT
ATCCAGCTGCGTACTCGCTCACAACATGCGCATTGACTCCGCTAGCAGGG
AAGTTGAGCTCAATGTTTCCGCTCCGTTGGATCTATGTCTCCTTCTTCTC
TATATTCCTGATTGGCAGCCTCGTGTGCGGCTTTGCGCCAAACAGCAACA
CCTTCATCGCGGGTCGCGCAATAGCTGGTATCGGGGCATCCGGTGTCGCA
AGTGGCGGCTTCGTTATCGTCCTGACCGTATCCCCGGAAAAGTCAAAGCC
AGTGCTGCTCGGAATATGCAGCAGTTGCTTCGCTATGGGCCTTATCCTAG
CACCCGTCATTGGTGGAGCATTTACGCAGTACGCTACTTGGCGGTGGTGT
TTCTGGGTTAATCTTCCTCCTGGTGCTCTGACATTGCTGGCGATGCTGTG
CTTTTTCAGGCCTCCGTCAATACAGCGCGACCGGACTGCTGTCCAACGGA
TCATCGACTTGGATCTCATCGGTTGTGCTATTTTCATTCCGGGTATCTTC
ATGCTTCTTCTTGCTATGATGTGGGGCGGTACAAAAGAGTCGTGGGACTC
AGCGACGACCATTGGCCTATTTGTAGGATCTGCCGTCATGCTTATCATCT
TTGTTTCCTGGGAAGGCTATAAGGGTGAGGACGCAATGATACCGGGTAAT
ATGGTTGCCAGACGGACAATCACCTTTAGTGTCGTGTTCTCATTCTTCCA
TTTCGGTTCTGTCGGTATTATGAATTACTATCTTCCTGAGTGGTTCCAGG
TAGTGGAAGGCGCCAGTCCGTTGGAAAGTGGCACGCGAACTCTGGCTTCG
GTGCTCGCTCAAATAGTCGGGACCCTGTCTGCTGGATTTCTAGATGGCTG
CCTCCTCCACAGGTGATCCCAGGATAACTACCAAGTCAGAACAAGATGCC
AACAGTTCTGCGCAAGGCCAGCATGCGGTCAATACTGAAGTCAACAATGA
ACTGCCAGAAACGAACCCAAACGCGATGCACGGCTTCAAGCTCTTTGCCA
TTTTTTATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGCTTTT
GGGGTGAAGTGGGAGAGAATTACTGAGAAAGCGACAAATGGTCCGGAAGA
GGCCGTAGCTGAAGAGAAGTAGCACGCAAAATACACTACTACAACCCTTG
GCTGTACATCGGCCCCCTCTTCATGTGCACTGCAGCAGCACTATACACAC
ACTTCTCGACCTTTCACACCCCATCCAGCCAATGGATCGGCTTCCAAGTC
ATTCAGGGTCTTGGTGTCGGCATGGCACAGCAAATGCCATCGCTCATCAT
CCAGCATTCCGTGCGCGACAAACCAGAGCTCATGCCGGCCGCGATATCTC
TGAACCTATTCTTCCAGTACTTAGGGGCCACTATCACGCAATCCCTTGGC
GGTATCGTATTTCGCTCAATCCTACTCCCGGAATTGGCAGACCATGCTGG
TTTGAATGCTGATCAAATCGCGCTGGTGTCCGCTGCTGGAATGGCGGATG
TACGTGATACCGTTGACAAATATTTTCCCAATCTGTTAGATCTCGTTCTG
GAAGCTTATAATAAGGCTATTACTTCAACTTTTGCCATTCCATCCATTAC
AGCCGACTTCCATGATACCGCCCAACTGGCCTGGTATCCAGCTGCGTACT
CGCTCACAACATGCGCATTGACTCCGCTAGCAGGGAAGTTGAGCTCAATG
TTTCCGCTCCGTTGGATCTATGTCTCCTTCTTCTCTATATTCCTGATTGG
CAGCCTCGTGTGCGGCTTTGCGCCAAACAGCAACACCTTCATCGCGGGTC
GCGCAATAGCTGGTATCGGGGCATCCGGTGTCGCAAGTGGCGGCTTCGTT
ATCGTCCTGACCGTATCCCCGGAAAAGTCAAAGCCAGTGCTGCTCGGAAT
ATGCAGCAGTTGCTTCGCTATGGGCCTTATCCTAGCACCCGTCATTGGTG
GAGCATTTACGCAGTACGCTACTTGGCGGTGGTGTTTCTGGGTTAATCTT
CCTCCTGGTGCTCTGACATTGCTGGCGATGCTGTGCTTTTTCAGGCCTCC
GTCAATACAGCGCGACCGGACTGCTGTCCAACGGATCATCGACTTGGATC
TCATCGGTTGTGCTATTTTCATTCCGGGTATCTTCATGCTTCTTCTTGCT
ATGATGTGGGGCGGTACAAAAGAGTCGTGGGACTCAGCGACGACCATTGG
CCTATTTGTAGGATCTGCCGTCATGCTTATCATCTTTGTTTCCTGGGAAG
GCTATAAGGGTGAGGACGCAATGATACCGGGTAATATGGTTGCCAGACGG
ACAATCACCTTTAGTGTCGTGTTCTCATTCTTCCATTTCGGTTCTGTCGG
TATTATGAATTACTATCTTCCTGAGTGGTTCCAGGTAGTGGAAGGCGCCA
GTCCGTTGGAAAGTGGCACGCGAACTCTGGCTTCGGTGCTCGCTCAAATA
GTCGGGACCCTGTCTGCTGGATTTCTAGATGGCTGCCTCCTCCACAGGTG
ATCCCAGGATAACTACCAAGTCAGAACAAGATGCCAACAGTTCTGCGCAA
GGCCAGCATGCGGTCAATACTGAAGTCAACAATGAACTGCCAGAAACGAA
CCCAAACGCGATGCACGGCTTCAAGCTCTTTGCCATTTTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:565674..567548 - |
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