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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:605158..606205+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010890-T1 ID=CBS51388_010890-T1|Name=CBS51388_010890-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1048bp|location=Sequence derived from alignment at An18:605158..606205+ (Aspergillus niger CBS 513.88)
ATGGTCAACGTTGCCATTGCGGGCGGAACAGGTGCTGTTGGGCGTACCCT
TCTGGAGGTGATGGCTTCACAGACCCGACATCGTGCGTTCGCCCTCACAC
GAAGAGTAAGTCAGCTTAGGTTACCACATATGTGTAGTAAGAATCATCTT
ATGCTTCACAGGAGCCCACCGAAGATGAGCAGCTACTTGTCCCAACATAC
CAAGTCAACTACGAGGACATCGATTCGCTCAAGCTATTCCTGGAAGAACA
CAACATCCACACGGTCATCAGCGCCTTCGGCATCAACGCTACTTCCCTCG
CAACATCGCAGCTGAATCTCATCAAGGCTGCTGATGCATCGTCTGTCACT
AAGAGATTCATTCCTAGCTCCTTTGCCATCCCTTATCCGGAAGAGTGGGT
CTCCATCTTGCTTTTCATACCACATCTTCTAATTATCGTAGAGATGTCTC
TATTCTGCCACCTCTTGAACACTACTTTGCTTCTTTCAGAGCCCTGGCAA
ATTCTAACCTCGAATGGGCCCCCGTCTATAATGGCACATTCCTAGAGTAC
ATCGCACCCCCAACACTGAAGTCGTACCACCCGCACAGTGTGCTGGTACT
TGATATGGAGAACAATATTGCTGCGATCCCCGGAAATGGCAACACACCAG
TTACTTTCACGTACACCTTTGATATCGCACGATTCGTGATTGCCGCGCTC
GATCTCGAAAAGTGGCCCCGGGAGCTCCGCATTGTCGGTGACGAACTGAC
CTTCAATGAATTATTGAAGCTTGCGGAGGAGGTAAAGGGGGTTAAATTTG
ACGTCGTCTACGATGATATCGACAAGCTGAAGGCATCACAAATTACGGAG
CTACCGGGTCATGTCAAGTCGTATAACAAGTTTCCTAAGGAGAGGCTTCA
GTGCTTCTTGGCTATTTTTGAAACTTGGATGGCTACGGGTCAGGCGCGGG
TTGCTAGGGAGGGAAGTTTGAATGAGATATTTCCGGATATTAAGCCTCTT
ACTGCTAGGCAGGTGATGGAACAGCATTGGAAGTCTGTCAAGGGATAG back to topCoding sequence (CDS) from alignment at An18:605158..606205+ >CBS51388_010890-T1 ID=CBS51388_010890-T1|Name=CBS51388_010890-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2835bp|location=Sequence derived from alignment at An18:605158..606205+ (Aspergillus niger CBS 513.88)
ATGGTCAACGTTGCCATTGCGGGCGGAACAGGTGCTGTTGGGCGTACCCT
TCTGGAGGTGATGGCTTCACAGACCCGACATCGTGCGTTCGCCCTCACAC
GAAGAGAGCCCACCGAAGATGAGCAGCTACTTGTCCCAACATACCAAGTC
AACTACGAGGACATCGATTCGCTCAAGCTATTCCTGGAAGAACACAACAT
CCACACGGTCATCAGCGCCTTCGGCATCAACGCTACTTCCCTCGCAACAT
CGCAGCTGAATCTCATCAAGGCTGCTGATGCATCGTCTGTCACTAAGAGA
TTCATTCCTAGCTCCTTTGCCATCCCTTATCCGGAAGAAGATGTCTCTAT
TCTGCCACCTCTTGAACACTACTTTGCTTCTTTCAGAGCCCTGGCAAATT
CTAACCTCGAATGGGCCCCCGTCTATAATGGCACATTCCTAGAGTACATC
GCACCCCCAACACTGAAGTCGTACCACCCGCACAGTGTGCTGGTACTTGA
TATGGAGAACAATATTGCTGCGATCCCCGGAAATGGCAACACACCAGTTA
CTTTCACGTACACCTTTGATATCGCACGATTCGTGATTGCCGCGCTCGAT
CTCGAAAAGTGGCCCCGGGAGCTCCGCATTGTCGGTGACGAACTGACCTT
CAATGAATTATTGAAGCTTGCGGAGGAGGTAAAGGGGGTTAAATTTGACG
TCGTCTACGATGATATCGACAAGCTGAAGGCATCACAAATTACGGAGCTA
CCGGGTCATGTCAAGTCGTATAACAAGTTTCCTAAGGAGAGGCTTCAGTG
CTTCTTGGCTATTTTTGAAACTTGGATGGCTACGGGTCAGGCGCGGGTTG
CTAGGGAGGGAAGTTTGAATGAGATATTTCCGGATATTAAGCCTCTTACT
GCTAGGCAGGTGATGGAACAGCATTGGAAGTCTGTCAAGGGATAGATGGT
CAACGTTGCCATTGCGGGCGGAACAGGTGCTGTTGGGCGTACCCTTCTGG
AGGTGATGGCTTCACAGACCCGACATCGTGCGTTCGCCCTCACACGAAGA
GAGCCCACCGAAGATGAGCAGCTACTTGTCCCAACATACCAAGTCAACTA
CGAGGACATCGATTCGCTCAAGCTATTCCTGGAAGAACACAACATCCACA
CGGTCATCAGCGCCTTCGGCATCAACGCTACTTCCCTCGCAACATCGCAG
CTGAATCTCATCAAGGCTGCTGATGCATCGTCTGTCACTAAGAGATTCAT
TCCTAGCTCCTTTGCCATCCCTTATCCGGAAGAAGATGTCTCTATTCTGC
CACCTCTTGAACACTACTTTGCTTCTTTCAGAGCCCTGGCAAATTCTAAC
CTCGAATGGGCCCCCGTCTATAATGGCACATTCCTAGAGTACATCGCACC
CCCAACACTGAAGTCGTACCACCCGCACAGTGTGCTGGTACTTGATATGG
AGAACAATATTGCTGCGATCCCCGGAAATGGCAACACACCAGTTACTTTC
ACGTACACCTTTGATATCGCACGATTCGTGATTGCCGCGCTCGATCTCGA
AAAGTGGCCCCGGGAGCTCCGCATTGTCGGTGACGAACTGACCTTCAATG
AATTATTGAAGCTTGCGGAGGAGGTAAAGGGGGTTAAATTTGACGTCGTC
TACGATGATATCGACAAGCTGAAGGCATCACAAATTACGGAGCTACCGGG
TCATGTCAAGTCGTATAACAAGTTTCCTAAGGAGAGGCTTCAGTGCTTCT
TGGCTATTTTTGAAACTTGGATGGCTACGGGTCAGGCGCGGGTTGCTAGG
GAGGGAAGTTTGAATGAGATATTTCCGGATATTAAGCCTCTTACTGCTAG
GCAGGTGATGGAACAGCATTGGAAGTCTGTCAAGGGATAGATGGTCAACG
TTGCCATTGCGGGCGGAACAGGTGCTGTTGGGCGTACCCTTCTGGAGGTG
ATGGCTTCACAGACCCGACATCGTGCGTTCGCCCTCACACGAAGAGAGCC
CACCGAAGATGAGCAGCTACTTGTCCCAACATACCAAGTCAACTACGAGG
ACATCGATTCGCTCAAGCTATTCCTGGAAGAACACAACATCCACACGGTC
ATCAGCGCCTTCGGCATCAACGCTACTTCCCTCGCAACATCGCAGCTGAA
TCTCATCAAGGCTGCTGATGCATCGTCTGTCACTAAGAGATTCATTCCTA
GCTCCTTTGCCATCCCTTATCCGGAAGAAGATGTCTCTATTCTGCCACCT
CTTGAACACTACTTTGCTTCTTTCAGAGCCCTGGCAAATTCTAACCTCGA
ATGGGCCCCCGTCTATAATGGCACATTCCTAGAGTACATCGCACCCCCAA
CACTGAAGTCGTACCACCCGCACAGTGTGCTGGTACTTGATATGGAGAAC
AATATTGCTGCGATCCCCGGAAATGGCAACACACCAGTTACTTTCACGTA
CACCTTTGATATCGCACGATTCGTGATTGCCGCGCTCGATCTCGAAAAGT
GGCCCCGGGAGCTCCGCATTGTCGGTGACGAACTGACCTTCAATGAATTA
TTGAAGCTTGCGGAGGAGGTAAAGGGGGTTAAATTTGACGTCGTCTACGA
TGATATCGACAAGCTGAAGGCATCACAAATTACGGAGCTACCGGGTCATG
TCAAGTCGTATAACAAGTTTCCTAAGGAGAGGCTTCAGTGCTTCTTGGCT
ATTTTTGAAACTTGGATGGCTACGGGTCAGGCGCGGGTTGCTAGGGAGGG
AAGTTTGAATGAGATATTTCCGGATATTAAGCCTCTTACTGCTAGGCAGG
TGATGGAACAGCATTGGAAGTCTGTCAAGGGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:605158..606205 + |
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