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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:624646..625222- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010895-T1 ID=CBS51388_010895-T1|Name=CBS51388_010895-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=577bp|location=Sequence derived from alignment at An18:624646..625222- (Aspergillus niger CBS 513.88)
ATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGG
TGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTA
AGGGTGTGAAGAGTATGGACTTCTGTAAGGTGAGCTGAAAGAACACTCCA
TTGACAGCTTTAAATCGGATCCGTCATTTGCAAGACGTCCAATTGGAGCT
ATCTGAAGTAGAAGAACGCGCAAGGCTCATATGGTTTACTGTAGGAATTC
AACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGCGCGTGT
CACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTCCCACTA
CCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAGAATCGC
ATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGATATCCCT
CAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGCGACTGT
CTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAGGCCAAA
TCCGTCGGCATCCAGGTTGTACCATGA back to topCoding sequence (CDS) from alignment at An18:624646..625222- >CBS51388_010895-T1 ID=CBS51388_010895-T1|Name=CBS51388_010895-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=924bp|location=Sequence derived from alignment at An18:624646..625222- (Aspergillus niger CBS 513.88)
GAATTCAACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGC
GCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTC
CCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAG
AATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGAT
ATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGC
GACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAG
GCCAAATCCGTCGGCATCCAGGTTGTACCATGAATGGCGAAGAAGGCATT
GGCCAAGGACCAGATTGTGAAGCTCATTGTGGGTGCCGGTCAGGCCAGTC
CCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGTGTGAAGAGTATG
GACTTCTGTAAGGAATTCAACGCCAGAACTGCACACATCAACACCGGTGT
ACCCATTCCTGCGCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCG
ACCTCCGTACTCCCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTG
GAACCTCGCAAGAATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTT
CATCGGCAAGATATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGC
ACTCCGAGACGCGACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGT
GTCATTGCCCAGGCCAAATCCGTCGGCATCCAGGTTGTACCATGAATGGC
GAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGGTGCCG
GTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGT
GTGAAGAGTATGGACTTCTGTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BG5 |
| DBxref | InterPro:IPR036769 |
| DBxref | InterPro:IPR006519 |
| DBxref | InterPro:IPR020783 |
| DBxref | InterPro:IPR036796 |
| DBxref | InterPro:IPR020784 |
| DBxref | InterPro:IPR000911 |
| DBxref | PFAM:PF03946 |
| DBxref | PFAM:PF00298 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:624646..625222 - |
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