You are here

CBS51388_010897-T1, CBS51388_010897-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010897-T1
Unique NameCBS51388_010897-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:627644..628459+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010897-T1 ID=CBS51388_010897-T1|Name=CBS51388_010897-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=816bp|location=Sequence derived from alignment at An18:627644..628459+ (Aspergillus niger CBS 513.88)
ATGGACCCCAGACTAGTTACCGATAGAAGAAGCAAGCGCTTCCTCCCGAA GAAGCGGTTGAGGTATTGTTTCCCCTCGCGGATCCTTTCTCGGGGTTACG GGGATGTCTACTTCAGGGAAACATACTAACAATGGATCCCACTGCAGAAA GCTCTTGCGAAACAACATAGATGGAATAAGTAAGTTAACAAATCACTCCA GATCAAATACTACAAGTCACCCGCTAACAAAGGCTAGCCCGCCCCTCGAT CCGGTACGCAAACCCCATCAAACACGCGTTATCCGAGATAGCAGCACGTG TACCATAAATAAACACCAATTAACTGATTACTGAATCCAGTCGTCTTGCC CGCCGTGGTGGTGTCATCCGAATCAGCGCGGACGTTTATCCGGAAGTGCG CAAGACGGTCAAAAACCGCCTTACCGAGGTGAGTGACTTTGATATGTATA TTTTGGGGACTGGTTGCTAACTGTTCAAGATCATAAGACAAATCATCCTC GTGATGGAGTCGTCCACCACTCCGGGCCACGAACGCAAGGTACGTTTTCA TTGAACATTCTAAATTCTCCAATTGTCCCAGCATGGACTAACTTCTATAC TCCTAGTTGGTCAGAACTCAAGACGTGAGTTCCCAGCATGTTATATTGTT CAGATTCGTGTACTGACATAAGCTGGCGAAGGTGGTCTTTGCGTTTAATC GTGTAAGTAAATAAAGTTACTGGGCATATACCTCCACCTCCAACCTAGTC AAACGGACAGATATTAACGTATCTCTAACGAAATAGATGGGCCACACACT TTACGGCTTTGGCTAA
back to top

Coding sequence (CDS) from alignment at An18:627644..628459+

>CBS51388_010897-T1 ID=CBS51388_010897-T1|Name=CBS51388_010897-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=960bp|location=Sequence derived from alignment at An18:627644..628459+ (Aspergillus niger CBS 513.88)
ATGGACCCCAGACTAGTTACCGATAGAAGAAGCAAGCGCTTCCTCCCGAA
GAAGCGGTTGAGTCGTCTTGCCCGCCGTGGTGGTGTCATCCGAATCAGCG
CGGACGTTTATCCGGAAGTGCGCAAGACGGTCAAAAACCGCCTTACCGAG
ATCATAAGACAAATCATCCTCGTGATGGAGTCGTCCACCACTCCGGGCCA
CGAACGCAAGATGGGCCACACACTTTACGGCTTTGGCTAAATGGACCCCA
GACTAGTTACCGATAGAAGAAGCAAGCGCTTCCTCCCGAAGAAGCGGTTG
AGTCGTCTTGCCCGCCGTGGTGGTGTCATCCGAATCAGCGCGGACGTTTA
TCCGGAAGTGCGCAAGACGGTCAAAAACCGCCTTACCGAGATCATAAGAC
AAATCATCCTCGTGATGGAGTCGTCCACCACTCCGGGCCACGAACGCAAG
ATGGGCCACACACTTTACGGCTTTGGCTAAATGGACCCCAGACTAGTTAC
CGATAGAAGAAGCAAGCGCTTCCTCCCGAAGAAGCGGTTGAGTCGTCTTG
CCCGCCGTGGTGGTGTCATCCGAATCAGCGCGGACGTTTATCCGGAAGTG
CGCAAGACGGTCAAAAACCGCCTTACCGAGATCATAAGACAAATCATCCT
CGTGATGGAGTCGTCCACCACTCCGGGCCACGAACGCAAGATGGGCCACA
CACTTTACGGCTTTGGCTAAATGGACCCCAGACTAGTTACCGATAGAAGA
AGCAAGCGCTTCCTCCCGAAGAAGCGGTTGAGTCGTCTTGCCCGCCGTGG
TGGTGTCATCCGAATCAGCGCGGACGTTTATCCGGAAGTGCGCAAGACGG
TCAAAAACCGCCTTACCGAGATCATAAGACAAATCATCCTCGTGATGGAG
TCGTCCACCACTCCGGGCCACGAACGCAAGATGGGCCACACACTTTACGG
CTTTGGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010897CBS51388_010897Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010897-T1.exon1CBS51388_010897-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010897-T1.exon2CBS51388_010897-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010897-T1.exon3CBS51388_010897-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010897-T1.exon4CBS51388_010897-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010897-T1.cdsCBS51388_010897-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010897-T1CBS51388_010897-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009072
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:627644..628459 +