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CBS51388_010901-T1, CBS51388_010901-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010901-T1
Unique NameCBS51388_010901-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:654422..655491-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010901-T1 ID=CBS51388_010901-T1|Name=CBS51388_010901-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1070bp|location=Sequence derived from alignment at An18:654422..655491- (Aspergillus niger CBS 513.88)
ATGTCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAGACCTT
CACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGACCTGG
TTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGATTCAC
TCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGTGACTT
TACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGATCGCTG
GCCAGGTTGACTTCATTGTACACTCTCTCAAGGGTGCGTTTCCACTCGTT
CTTTATCTCGCTCAAAGTGACAAAATTAACTTATCTCTATCATTACAGAT
GTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAGCG
CGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACACAA
GTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCCGT
CGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGATGT
GCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGGCC
CTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCTG
GGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTCTA
TGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCAGC
AGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCACTTTTGCT
TGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTGC
GCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGACGATGCGGT
CCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGAT
GGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTACGGTGGC
TAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAAATCCAGC
GCAACAAGCAGACTGCTTAG
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Coding sequence (CDS) from alignment at An18:654422..655491-

>CBS51388_010901-T1 ID=CBS51388_010901-T1|Name=CBS51388_010901-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2010bp|location=Sequence derived from alignment at An18:654422..655491- (Aspergillus niger CBS 513.88)
ATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAG
CGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACAC
AAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCC
GTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGAT
GTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGG
CCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATC
TGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTC
TATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCA
GCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCACTTTTG
CTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGT
GCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGACGATGCG
GTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTG
ATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTACGGTG
GCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAAATCCA
GCGCAACAAGCAGACTGCTTAGATGTCTTCTGCCCCGCCCCACGCCACCA
ACCCCTCATCGCGCAAGACCTTCACCATTGGCACGCGCAAGTCCAAGCTT
GCTCTGCTTCAAACAGACCTGGTTCAAGCGGCGCTCAAGCAAACATGGCC
GGACTATGAATTCAAGATTCACTCCCGAGAGACCGCAGGCGACCAGAACA
CGACCATTGCGCTCCGTGACTTTACGACCAAGAACCTGTGGACCCAGGAA
CTGGAGGACCTTCTGATCGCTGGCCAGGTTGACTTCATTGTACACTCTCT
CAAGGATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTATGA
TGAAGCGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTTCA
TACACAAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCATC
CATCCGTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGTTA
TGGATGTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAGAG
GATGGCCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGATT
GGATCTGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGGAA
TGCTCTATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGGAT
GACCAGCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACCAC
TTTTGCTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGGAT
GCAGTGCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGACG
ATGCGGTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGA
GGTTGATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTA
CGGTGGCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACGAA
ATCCAGCGCAACAAGCAGACTGCTTAGATGTCTTCTGCCCCGCCCCACGC
CACCAACCCCTCATCGCGCAAGACCTTCACCATTGGCACGCGCAAGTCCA
AGCTTGCTCTGCTTCAAACAGACCTGGTTCAAGCGGCGCTCAAGCAAACA
TGGCCGGACTATGAATTCAAGATTCACTCCCGAGAGACCGCAGGCGACCA
GAACACGACCATTGCGCTCCGTGACTTTACGACCAAGAACCTGTGGACCC
AGGAACTGGAGGACCTTCTGATCGCTGGCCAGGTTGACTTCATTGTACAC
TCTCTCAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004418hydroxymethylbilane synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0018160peptidyl-pyrromethane cofactor linkage
GO:0033014tetrapyrrole biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010901CBS51388_010901Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010901-T1CBS51388_010901-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010901-T1.cdsCBS51388_010901-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010901-T1.exon2CBS51388_010901-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010901-T1.exon1CBS51388_010901-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262YP5
DBxrefInterPro:IPR022419
DBxrefInterPro:IPR036803
DBxrefInterPro:IPR022418
DBxrefInterPro:IPR022417
DBxrefInterPro:IPR000860
DBxrefPFAM:PF03900
DBxrefPFAM:PF01379
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:654422..655491 -
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