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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:659532..660329- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010903-T1 ID=CBS51388_010903-T1|Name=CBS51388_010903-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=798bp|location=Sequence derived from alignment at An18:659532..660329- (Aspergillus niger CBS 513.88)
ATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGG
CCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTGTACGCCATCC
TATACTTTCCATACCAAACCTTTTTCTATTCATTCCCCTACCAATAACAA
GTACCAGATGACTGACAATCTGAAATAACTGATATAGTCCCGACTTCACA
ATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCACCTTCTA
CGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGCAGCGTC
TGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAGCAGAAA
CTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGATCCGTCG
CCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCATTTGTTT
GGCCCGAGGCGCCGACGGATATGGCTCCGTATGTTACCCTCTCTATGTAT
CTGTTTGATATTGTTGTTGTTGTCATTGTTGTTGAAGGATTGGTGGGTTG
TGGAAACAATGCTGACTATATGGGTGTTTGTGTGCAGATGGGAGAAGGAC
CAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAA
GCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGG
AGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGG
AAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGA back to topCoding sequence (CDS) from alignment at An18:659532..660329- >CBS51388_010903-T1 ID=CBS51388_010903-T1|Name=CBS51388_010903-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1773bp|location=Sequence derived from alignment at An18:659532..660329- (Aspergillus niger CBS 513.88)
ATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCC
AGGATAAGCAGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGG
GAGGTCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTG
GAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGG
TTAAGTCGTGATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCT
TCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGG
ATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTG
CGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCG
CTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGG
TCGAGATGAAGGAGGCATTTGTTTGGCCCGAGGCGCCGACGGATATGGCT
CCATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTC
GGCCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAA
GGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGC
AGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTAT
AAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGAC
TTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGT
GATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCG
CTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCG
ATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTC
GTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATA
TGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGA
AGGAGGCATTTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCC
GACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCG
GCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAAGGACCAGTT
CTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGG
ATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGAT
GCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGC
TTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGATCCCGAC
TTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCAC
CTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGC
AGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAG
CAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGAT
CCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCAT
TTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCCGACGATTCT
CCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTC
TCCCAACGGAAGCAGATCTTCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HX6 |
| DBxref | InterPro:IPR012678 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR013025 |
| DBxref | PFAM:PF00276 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:659532..660329 - |
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