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CBS51388_010923-T1, CBS51388_010923-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010923-T1
Unique NameCBS51388_010923-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:718919..720520-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010923-T1 ID=CBS51388_010923-T1|Name=CBS51388_010923-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1602bp|location=Sequence derived from alignment at An18:718919..720520- (Aspergillus niger CBS 513.88)
ATGCAGAATTCCGCCAAGAAGCCCGACACCGTCGCAAAGCGGCGTAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTCGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCCGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTCGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAAGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACGAAG
CTCACGCCGCACTTTGCAGCTCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTGCCTCCGATTGGCTTCACTTTCAAGA
ACAGACGCATGGATTTGGATATCGAAGACTGCCCGTTGGGTACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGCGCCACTCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACCGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCATTCTTCCAGAACAACAAC
TCCATCCTCTCTGGGTTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTATTCAAGTCCAGT
CTGGGCGTCGACGTTGCTGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGGTTCGCCGCCGCAGATGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGTTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATACGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAGGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Coding sequence (CDS) from alignment at An18:718919..720520-

>CBS51388_010923-T1 ID=CBS51388_010923-T1|Name=CBS51388_010923-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1602bp|location=Sequence derived from alignment at An18:718919..720520- (Aspergillus niger CBS 513.88)
ATGCAGAATTCCGCCAAGAAGCCCGACACCGTCGCAAAGCGGCGTAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTCGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCCGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTCGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAAGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACGAAG
CTCACGCCGCACTTTGCAGCTCCTGGCGGAAACAAGAGGAGGGGTAAGGG
GCCCCGCGAGCCGCACAAGGAGGTGCCTCCGATTGGCTTCACTTTCAAGA
ACAGACGCATGGATTTGGATATCGAAGACTGCCCGTTGGGTACCGACATT
GTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGG
CAAGTACACCAAAGGCGCCACTCTTCTCATGCGCGAATCCACCAGCCGCG
TGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCC
GGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGA
AGAGAAGCGCTGCGTGACCGACTCGAACGCCACCAGCATCGAATATGTCG
ACGACTACGTCTTCACCAACAAAGCCGGCGCATTCTTCCAGAACAACAAC
TCCATCCTCTCTGGGTTCACCGAGTTCATCCGCCAACACGCTATGCCCCC
GAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACT
CCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTATTCAAGTCCAGT
CTGGGCGTCGACGTTGCTGGCGACTCCATCGCCTCGGCGCGGGACAACGC
TCGCGACAACAAGCTCCCTAACACTGGGTTCGCCGCCGCAGATGCAGCCA
CGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATT
GACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGTTGCTGGC
CTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGG
CGCGCGACGTGGCTGTCATGGTGCAAGGCGATACGGAGAAGAAGATCCGG
TACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACA
TGTTGAGGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0030697S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0008173RNA methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010923CBS51388_010923Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010923-T1.cdsCBS51388_010923-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010923-T1.exon1CBS51388_010923-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010923-T1CBS51388_010923-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR025795
DBxrefInterPro:IPR002792
DBxrefInterPro:IPR030390
DBxrefInterPro:IPR030391
DBxrefInterPro:IPR010280
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:718919..720520 -
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