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CBS51388_010933-T1, CBS51388_010933-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010933-T1
Unique NameCBS51388_010933-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:745507..746699+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010933-T1 ID=CBS51388_010933-T1|Name=CBS51388_010933-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1193bp|location=Sequence derived from alignment at An18:745507..746699+ (Aspergillus niger CBS 513.88)
ATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAGGACATCTACCG
CTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTTTGTACTCGGTC
CGCACGATAATACTGGCGAGTCAAATGAATTACAGTTACTGAAAACGTAG
GTACTAGAAACCACATTAAGAATATCCTTTATGGTCATCATGTCTCTTCT
ATAGGTACTAAATAGTAGTATGTCATAACCAGGTCATTAGCATCCACTGG
ACTCGAGCAAACAAGACAGAAGTGGCAATCCCACTGGCACTCTGCATTGA
CCGACGATGACCTCGTCTGGCTCAAGGATGTAGCGCAATGCAGAACACTC
CGTTTACCATTGAGCTTCTACTCCCTCGGACCCCTGTTCTGTCGGGGAAC
AGCCTTTGAAGGGGATCCATCAGAGGTGTACCACCATTGCTGGAGTACTG
TGAAGCATCTAATCGAAAAATGTTGGTTTCACGGTATCGGAATCCTCATT
GATTTCCAGGCCAGCGCCAGCGGTATAAACCTCTGTGCCAGTGCGAAAGA
TCGGACAATAGCTCGGGACTGCGTCGCTTTTCTTGCTCAGGAAATAACCT
TCCATTCTATGTCCGCGGTAGTCGGACTTTCAGTATCCTCCGGATGTGAA
CCTGCCCCTGACATGTGCGAATGCTACGATGAGATCCTTAAGATAGCCAA
TGCCATTGACGCATGTTTGCCTGTATACATCGACGACAACCAAGCTCAAT
GCAACAAACGAGTCTTCAAGGGCTGCGAAAGCGACATCCCTCAGTTCAAG
AGCGACATCTCAATCGGTAAAATCCAAATACCTAGCCAAATGATGCTACC
CGAAACAGAGGTCCGAGAGAAGATCAACAAAGCCAAAGCCGAACGATCAG
GATTCCAGGAAAAGGTTTTGTCGCAAGTCTCGGAATCTTGGGGCTCGAAC
GAACGTCAAAGCTTCGTCCATGGCTGGAACCTGGGATACGATGATGCGTT
GCGCTTCTTTGGCGCTGCTGTTCAGGGCATCTTGGCTCCGCGAAAAGGTG
CAGACAAGATCTATGATATAGAGTTGTGGGTCCAGCAGCGCAAAAGAGAT
ATAGACCCGGAGCAGCTCGGGGAGAATTCTGCGGCATGGGAGGATGGTCT
TCGGAGAGGTATTCAAGATTTTTACAACATCATCGGAATTTGA
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Coding sequence (CDS) from alignment at An18:745507..746699+

>CBS51388_010933-T1 ID=CBS51388_010933-T1|Name=CBS51388_010933-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2214bp|location=Sequence derived from alignment at An18:745507..746699+ (Aspergillus niger CBS 513.88)
ATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAGGACATCTACCG
CTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTTTGTACTCGGTC
CGCACGATAATACTGGCGAGTCAAATGAATTACAGTTACTGAAAACGTCA
TTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGGCAATCCCACTG
GCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAAGGATGTAGCGC
AATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCCTCGGACCCCTG
TTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAGGTGTACCACCA
TTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTGGTTTCACGGTA
TCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTATAAACCTCTGT
GCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTCGCTTTTCTTGC
TCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGGACTTTCAGTAT
CCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCTACGATGAGATC
CTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTATACATCGACGA
CAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTGCGAAAGCGACA
TCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCCAAATACCTAGC
CAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATCAACAAAGCCAA
AGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCAAGTCTCGGAAT
CTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCTGGAACCTGGGA
TACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAGGGCATCTTGGC
TCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTTGTGGGTCCAGC
AGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGAATTCTGCGGCA
TGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTACAACATCATCGG
AATTTGAATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAGGACA
TCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTTTGTA
CTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTACAGTTACTGAA
AACGTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGGCAAT
CCCACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAAGGAT
GTAGCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCCTCGG
ACCCCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAGGTGT
ACCACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTGGTTT
CACGGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTATAAA
CCTCTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTCGCTT
TTCTTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGGACTT
TCAGTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCTACGA
TGAGATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTATACA
TCGACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTGCGAA
AGCGACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCCAAAT
ACCTAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATCAACA
AAGCCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCAAGTC
TCGGAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCTGGAA
CCTGGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAGGGCA
TCTTGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTTGTGG
GTCCAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGAATTC
TGCGGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTACAACA
TCATCGGAATTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010933CBS51388_010933Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010933-T1.exon1CBS51388_010933-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010933-T1.exon2CBS51388_010933-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010933-T1.cdsCBS51388_010933-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010933-T1CBS51388_010933-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH5_49
DBxrefInterPro:IPR017853
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:745507..746699 +
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