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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:776506..778100- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010943-T1 ID=CBS51388_010943-T1|Name=CBS51388_010943-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1595bp|location=Sequence derived from alignment at An18:776506..778100- (Aspergillus niger CBS 513.88)
ATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTTCC
AGAGAAACGCGGCTATGAATTCGGAGGCCCGTATGTACTCAATGCCCAGT
TACAATTGACATTTGGGATACTGACCCTACAGTCTCGGTGCGTTCGGGAT
CGTGTTTGGTCTGCCCGTGCTGGTTTACAGCTTCACCTTCCTGTGTAACG
ATGTCTCCGGCTGCCCGGCACCTTCGTTACTACACCCTTCTACCGTGACG
CTTGACCAATTGAAGGCAGAGGTTGGCTGGCCCAAGGGAGGTTTTGCGGA
TTTTTACGACACAAGCGTGACACTCTGGGTCTTGGGCTATTATCTGCTTA
GCTTGGCGATGTACGTGTTCCTGCCTGGCCAGGAGGTCGAGGGCACTGAA
TTGGCGTGTGGAGGAAGATTGCCCTACAAGTTCAACGGTTGGTTTCTTCA
ATTGACTCGTATCTTCCTCTCTAACACGCCCTGCAGCTTTTCTGTCGGCC
GTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCGGA
CTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCACCG
CCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGAGC
TTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTAGC
TCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCCGAG
AGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTTCG
CGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTGGG
GTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTACG
GCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCTAC
GTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGACAT
TATTATGGACGGCTTCGGGTTCATGCTCTCATTTGGCGACCTCGTCTGGG
TCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGTAT
GAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCCGTCACCGCTGTGGG
CTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCACCA
ACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCTAGT
GGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATCAA
CTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTGCCTGCCTACGGGCA
TTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGATCTG
CAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGCTGGGGAATGATCTT
TACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGCGAGC
AGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAGCCGACTGGGACCGG
TATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGCATTTACTAA back to topCoding sequence (CDS) from alignment at An18:776506..778100- >CBS51388_010943-T1 ID=CBS51388_010943-T1|Name=CBS51388_010943-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4482bp|location=Sequence derived from alignment at An18:776506..778100- (Aspergillus niger CBS 513.88)
CTTTTCTGTCGGCCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTAC
ATCTACGGCGCGGACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCT
GCAGGTAATCACCGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCG
TCTATGCGAAGAGCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAG
CTCCGCCAGCTAGCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTT
CTTCATTGGCCGAGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCG
TCAGCGAAGCTTCGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGC
CCCGGCTTGCTGGGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCA
GTACCGCACCTACGGCTACATCACGGACTCGATCGTCATCTCGACTGCGT
TCCAGGCGTTCTACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTG
ACTACTATGGACATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGG
CGACCTCGTCTGGGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGG
CCGTCTTTCCGTATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCC
GTCACCGCTGTGGGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAA
TCGGTTCCGCACCAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACA
TCCAGACGGCTAGTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGC
GCCCGCCACATCAACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTG
CCTGCCTACGGGCATTGCCGGCTACGCTATTATTCAGACTATCAACCCGG
CCACCGGGGATCTGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGC
TGGGGAATGATCTTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCT
GATCCACCGCGAGCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAG
CCGACTGGGACCGGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGC
ATTTACTAATCTCGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGG
TTTACAGCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCT
TCGTTACTACACCCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGT
TGGCTGGCCCAAGGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACAC
TCTGGGTCTTGGGCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTG
CCTGGCCAGGAGGTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCC
CTACAAGTTCAACGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGG
GTGCAGCCCGTTCCAGAGAAACGCGGCTATGAATTCGGAGGCCCCTTTTC
TGTCGGCCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTAC
GGCGCGGACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGT
AATCACCGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATG
CGAAGAGCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGC
CAGCTAGCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCAT
TGGCCGAGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCG
AAGCTTCGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGC
TTGCTGGGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCG
CACCTACGGCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGG
CGTTCTACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACT
ATGGACATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGGCGACCT
CGTCTGGGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCT
TTCCGTATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCCGTCACC
GCTGTGGGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTT
CCGCACCAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGA
CGGCTAGTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGC
CACATCAACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTGCCTGCC
TACGGGCATTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCG
GGGATCTGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGCTGGGGA
ATGATCTTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCA
CCGCGAGCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAGCCGACT
GGGACCGGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGCATTTAC
TAATCTCGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGGTTTACA
GCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCTTCGTTA
CTACACCCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGTTGGCTG
GCCCAAGGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACACTCTGGG
TCTTGGGCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTGCCTGGC
CAGGAGGTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCCCTACAA
GTTCAACGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAG
CCCGTTCCAGAGAAACGCGGCTATGAATTCGGAGGCCCCTTTTCTGTCGG
CCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCG
GACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCAC
CGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGA
GCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTA
GCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCCG
AGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTT
CGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTG
GGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTA
CGGCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCT
ACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGAC
ATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGGCGACCTCGTCTG
GGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGT
ATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCCGTCACCGCTGTG
GGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCAC
CAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCTA
GTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATC
AACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTGCCTGCCTACGGG
CATTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGATC
TGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGCTGGGGAATGATC
TTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGCGA
GCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAGCCGACTGGGACC
GGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGCATTTACTAATCT
CGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGGTTTACAGCTTCA
CCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCTTCGTTACTACAC
CCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGTTGGCTGGCCCAA
GGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACACTCTGGGTCTTGG
GCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTGCCTGGCCAGGAG
GTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCCCTACAAGTTCAA
CGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTT
CCAGAGAAACGCGGCTATGAATTCGGAGGCCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0016126 | sterol biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018083 |
| DBxref | InterPro:IPR001171 |
| DBxref | PFAM:PF01222 |
| Product | c-5 sterol desaturase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:776506..778100 - |
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