CBS51388_010948-T1, CBS51388_010948-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_010948-T1
Unique Name	CBS51388_010948-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An18:781628..784702-
coding sequence from alignment at An18:781628..784702-

mRNA from alignment at An18:781628..784702-

Legend: CDSpolypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_010948-T1 ID=CBS51388_010948-T1|Name=CBS51388_010948-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3075bp|location=Sequence derived from alignment at An18:781628..784702- (Aspergillus niger CBS 513.88)
ATGACGACGGCGAGAGGTGCCAAGCCTCCAGTCAGCGCCCGTCCCAGCCA
GCCTTCCCCATACCCACCGTTTTCGACCACCGCCTCATCCCGCGGTTTCG
TCCCGTCTTTCTCCCCAGAGCACCAGCAGGACCAGACCCTGTGGCCAACT
CCCTCCGCATCCACCCCCTTCCTACCGAACGATGATCCGGGTCTTGTTCT
TGGGGTACCTGCGCCCATCATGATCCCTCCGGAGTCCGACGAGTCCCCCT
TGGCCTCCGGCCTGACCATGGGGCACGACGATATCGTCCTACCCGAAGAC
CTCGACACCCACAGCCGGGCCAGTTCGCGTGATCCAGGCAGTGCCGTTAC
TGCCGGTGATCCCGGTTCCTCGCATGAGTCCGGAATCGATGCCCAGCGGG
ACGACGGAAGAGGCGACCCCGCACACAATCACGATCAACAGGGAGGCGAA
AAACCGGCGTGGAGCGAAATGAAGACGAAAGCCGGCAAGGAACGAAAGCG
CCTACCCCTCGCCTGCATTGCTTGTCGAAGAAAAAAGATTCGATGCTCGG
GTGAAAAGCCTGCGTGCAAACACTGTTCGCGCTCTCGGATACCATGTGTT
TACAAGGTCACCACCAGAAAGGCGGCGCCCCGGACGGACTACATGGCGAT
GCTGGATAAGCGCTTGAAAAGGATGGAGGACCGGGTCATCAAAACTATCC
CCAAGGAAGAAACCAGAGACATGGGCGCGATTGGCCGGTCGGTTGTTCGA
CCACCTCAACCGGGACAGACCACCAAGGCGCAGAAGAAGCGGACAGCAGA
AGAGGCTTTTGCAGCTGAAATGGATGAGTGGGCTAGGGAGAACCGCAATG
GTCCGCAGGATACTTTTCCAATGCGCCGTGAGAGTAAACCGGGTGATGCG
TCGGGCTTAATGACTGCAGGTGCCGAATTTTTACCGTCACTTGAGATCCA
GGAGCACCTGGCAGAGGTGTTCTTCGATTGCGTTTACGGACAATCCTATC
TCCTCCTTCACAAACCAAGCTTTATCCGAAGACTCAAGGCGAGAACCGTG
CCCCCGGTTCTTATACTTGCGGTTTGCGCCGTTTCCGCTCGATTTTCAAC
CCATCCACAGATCAATTCCGAACCTCCTTTCCTGCGTGGCGAGAACTGGG
CCAATCCGGCAGCTGCTATAGCCCTGAGTCGCCATGACGAACCTAATATT
ACTATTCTGACCGTTTTCTTGCTTCTGGGCCTTCACGAGTTCGGCACGTG
TCATGGCGGGCGGAGTTGGTCATTCGGTGGCCAAGCACTGCGCATGGCGT
ATGCCCTGCAGTTACATAGGGAGCTCGACCATGACCCTTTGCTAATCCAG
AAGAATGGCAATGGGTCACAGCTCAGTTTCACAGATCGGGAGATACGGAG
ACGGACCATGTGGGCTTGCTTTTTGATGGACCGCTATAATTCATCCGGGA
GTCAGCGTCCGCCGATAGGGAATGAGAAATTCCTGCAAATACAGCTTCCT
ATTAAAGAGTCACATTTCCAGATGGAGATCCCGGGACCGACGGAAGACTT
AGACGGCAATGTCCTCAACCCAGTCCCGGATGATGTTGGTCAGCTATCTA
ATGCGAAGGAGAATATGGGAGTATCGGCCTTTATCATCCGTGCAGTCGTC
ATATGGGGCCGCATTGTTGATTATCTCAACCTTGGAGGGAAAAGAAAAGA
TACGCACCCACTGTGGTCGCCGGAATCTGGGTACACGCGCCTCAAGCGGC
AAATCGAAGAGTTTTCCGCGTCTCTCCCTAGCCATCTCTTGTTCACTTAC
GAAAACCTTCAGATCCATGCAGCCGACCGAATTGCCAATCAGTTCATCTT
TCTGCATATTATCATTCACCAGAACATGCTCTTCTTGAACCAATTCGCTA
TACCGCTATCACCGGGGGGTCGACCTCCCCGTGACATGCCTAAAGCATTC
TTGAGCAATGCTGGCCGAGCAGCAGTGGAAGCTGCTCATCATATCTCCAT
CCTGATCGATCGTGCATCAGCTTATCCCCTCACTGTTCCGTTCGCTGGGT
ACTGCGCTTATTCGGCCAGCACTGTCCATATATGGGGCATTTTCTCGAAG
AACGCACAGTTGGAAGCGCGATCCAAGGAGAATCTACGCCACACGTACCG
TTACCTCAATAAAATGAAGAAATATTGGGGAATGTTCCATTACATGGTAG
AAAGTGCCAAGGACCGATATCGCCAATTTGCCGATGCGGCCATCAAAGGC
ACGGTGGTTACGCAGAATGGCGGGCAGATTGCGCCTATGTTCCAGTATGG
CGACTGGTTCGACAAGTATCCTCATGGGATGTCAAGGTCGCACTGGGAGG
AACCTGATCTGCAAAAGGCGAAGAGCGACGATGGTGTCATGAGCCAGCGG
CCGGACCTTCAGAGCGTCGAAGAGTTCTTTGCCAGCCTTTCTCCTACACC
ACAGCCGAGCGCCCCGCGTAGGCATTCGAAGAAGAGCAGCAAGGCCGACA
GCGTGAGCGGGTTTGATGGACCAACTCCCCCGCAGTCGATGAATGACATC
GGTATGGACGGCGCCCCGGGCATGCTTGGGACAACCGGTACAGGCTTCCC
TCAGCCGGCCATGTTCAACCAAAATCGCGCGGGACAGCAGCCCTTCGCAC
AACCCGGCTTTGACTTTTCCATGCCCGCAGCAGACCAACTCCCGCAGCTG
GATCGACAATTTGTCTACGGTTCCTTCGGCGACTTTGACCCGTCTGCATC
CCTCGTTCCGCCCGAGAATCCGGCGATGCCCGCTCCCGTGAATCGCCCCG
ATGCTCCCCCTAATCAAGACCCCTCCACCATCTTTACCGGTCAATTAGAT
CCCAATGCCCCGTCCGGAGCAGGTGAATACTACCAGCCCAGCGCCTGGTT
CTTGCCATTTAACCTCGACCCTGTGGGTGCCGGTGGTGGCCTTGATCCAA
ATTCACAAGCCGCCGGCACCGGCAACCCCGTCGTAGGAGGTCCCGATCTC
TCCGGCTTCGGAAACATACCGATGGGAGCATTTGATCTGGGACTTACGGG
GGTGAATCGCGGATCGCAAGCATAA

Coding sequence (CDS) from alignment at An18:781628..784702-

>CBS51388_010948-T1 ID=CBS51388_010948-T1|Name=CBS51388_010948-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3075bp|location=Sequence derived from alignment at An18:781628..784702- (Aspergillus niger CBS 513.88)
ATGACGACGGCGAGAGGTGCCAAGCCTCCAGTCAGCGCCCGTCCCAGCCA
GCCTTCCCCATACCCACCGTTTTCGACCACCGCCTCATCCCGCGGTTTCG
TCCCGTCTTTCTCCCCAGAGCACCAGCAGGACCAGACCCTGTGGCCAACT
CCCTCCGCATCCACCCCCTTCCTACCGAACGATGATCCGGGTCTTGTTCT
TGGGGTACCTGCGCCCATCATGATCCCTCCGGAGTCCGACGAGTCCCCCT
TGGCCTCCGGCCTGACCATGGGGCACGACGATATCGTCCTACCCGAAGAC
CTCGACACCCACAGCCGGGCCAGTTCGCGTGATCCAGGCAGTGCCGTTAC
TGCCGGTGATCCCGGTTCCTCGCATGAGTCCGGAATCGATGCCCAGCGGG
ACGACGGAAGAGGCGACCCCGCACACAATCACGATCAACAGGGAGGCGAA
AAACCGGCGTGGAGCGAAATGAAGACGAAAGCCGGCAAGGAACGAAAGCG
CCTACCCCTCGCCTGCATTGCTTGTCGAAGAAAAAAGATTCGATGCTCGG
GTGAAAAGCCTGCGTGCAAACACTGTTCGCGCTCTCGGATACCATGTGTT
TACAAGGTCACCACCAGAAAGGCGGCGCCCCGGACGGACTACATGGCGAT
GCTGGATAAGCGCTTGAAAAGGATGGAGGACCGGGTCATCAAAACTATCC
CCAAGGAAGAAACCAGAGACATGGGCGCGATTGGCCGGTCGGTTGTTCGA
CCACCTCAACCGGGACAGACCACCAAGGCGCAGAAGAAGCGGACAGCAGA
AGAGGCTTTTGCAGCTGAAATGGATGAGTGGGCTAGGGAGAACCGCAATG
GTCCGCAGGATACTTTTCCAATGCGCCGTGAGAGTAAACCGGGTGATGCG
TCGGGCTTAATGACTGCAGGTGCCGAATTTTTACCGTCACTTGAGATCCA
GGAGCACCTGGCAGAGGTGTTCTTCGATTGCGTTTACGGACAATCCTATC
TCCTCCTTCACAAACCAAGCTTTATCCGAAGACTCAAGGCGAGAACCGTG
CCCCCGGTTCTTATACTTGCGGTTTGCGCCGTTTCCGCTCGATTTTCAAC
CCATCCACAGATCAATTCCGAACCTCCTTTCCTGCGTGGCGAGAACTGGG
CCAATCCGGCAGCTGCTATAGCCCTGAGTCGCCATGACGAACCTAATATT
ACTATTCTGACCGTTTTCTTGCTTCTGGGCCTTCACGAGTTCGGCACGTG
TCATGGCGGGCGGAGTTGGTCATTCGGTGGCCAAGCACTGCGCATGGCGT
ATGCCCTGCAGTTACATAGGGAGCTCGACCATGACCCTTTGCTAATCCAG
AAGAATGGCAATGGGTCACAGCTCAGTTTCACAGATCGGGAGATACGGAG
ACGGACCATGTGGGCTTGCTTTTTGATGGACCGCTATAATTCATCCGGGA
GTCAGCGTCCGCCGATAGGGAATGAGAAATTCCTGCAAATACAGCTTCCT
ATTAAAGAGTCACATTTCCAGATGGAGATCCCGGGACCGACGGAAGACTT
AGACGGCAATGTCCTCAACCCAGTCCCGGATGATGTTGGTCAGCTATCTA
ATGCGAAGGAGAATATGGGAGTATCGGCCTTTATCATCCGTGCAGTCGTC
ATATGGGGCCGCATTGTTGATTATCTCAACCTTGGAGGGAAAAGAAAAGA
TACGCACCCACTGTGGTCGCCGGAATCTGGGTACACGCGCCTCAAGCGGC
AAATCGAAGAGTTTTCCGCGTCTCTCCCTAGCCATCTCTTGTTCACTTAC
GAAAACCTTCAGATCCATGCAGCCGACCGAATTGCCAATCAGTTCATCTT
TCTGCATATTATCATTCACCAGAACATGCTCTTCTTGAACCAATTCGCTA
TACCGCTATCACCGGGGGGTCGACCTCCCCGTGACATGCCTAAAGCATTC
TTGAGCAATGCTGGCCGAGCAGCAGTGGAAGCTGCTCATCATATCTCCAT
CCTGATCGATCGTGCATCAGCTTATCCCCTCACTGTTCCGTTCGCTGGGT
ACTGCGCTTATTCGGCCAGCACTGTCCATATATGGGGCATTTTCTCGAAG
AACGCACAGTTGGAAGCGCGATCCAAGGAGAATCTACGCCACACGTACCG
TTACCTCAATAAAATGAAGAAATATTGGGGAATGTTCCATTACATGGTAG
AAAGTGCCAAGGACCGATATCGCCAATTTGCCGATGCGGCCATCAAAGGC
ACGGTGGTTACGCAGAATGGCGGGCAGATTGCGCCTATGTTCCAGTATGG
CGACTGGTTCGACAAGTATCCTCATGGGATGTCAAGGTCGCACTGGGAGG
AACCTGATCTGCAAAAGGCGAAGAGCGACGATGGTGTCATGAGCCAGCGG
CCGGACCTTCAGAGCGTCGAAGAGTTCTTTGCCAGCCTTTCTCCTACACC
ACAGCCGAGCGCCCCGCGTAGGCATTCGAAGAAGAGCAGCAAGGCCGACA
GCGTGAGCGGGTTTGATGGACCAACTCCCCCGCAGTCGATGAATGACATC
GGTATGGACGGCGCCCCGGGCATGCTTGGGACAACCGGTACAGGCTTCCC
TCAGCCGGCCATGTTCAACCAAAATCGCGCGGGACAGCAGCCCTTCGCAC
AACCCGGCTTTGACTTTTCCATGCCCGCAGCAGACCAACTCCCGCAGCTG
GATCGACAATTTGTCTACGGTTCCTTCGGCGACTTTGACCCGTCTGCATC
CCTCGTTCCGCCCGAGAATCCGGCGATGCCCGCTCCCGTGAATCGCCCCG
ATGCTCCCCCTAATCAAGACCCCTCCACCATCTTTACCGGTCAATTAGAT
CCCAATGCCCCGTCCGGAGCAGGTGAATACTACCAGCCCAGCGCCTGGTT
CTTGCCATTTAACCTCGACCCTGTGGGTGCCGGTGGTGGCCTTGATCCAA
ATTCACAAGCCGCCGGCACCGGCAACCCCGTCGTAGGAGGTCCCGATCTC
TCCGGCTTCGGAAACATACCGATGGGAGCATTTGATCTGGGACTTACGGG
GGTGAATCGCGGATCGCAAGCATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_010948	CBS51388_010948	Aspergillus niger CBS 513.88	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_010948-T1.cds	CBS51388_010948-T1.cds	Aspergillus niger CBS 513.88	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_010948-T1.exon1	CBS51388_010948-T1.exon1	Aspergillus niger CBS 513.88	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_010948-T1	CBS51388_010948-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	InterPro:IPR007219
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An18	supercontig	An18:781628..784702 -

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CBS51388_010948-T1, CBS51388_010948-T1 (mRNA) Aspergillus niger CBS 513.88