|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:797241..798240+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010953-T1 ID=CBS51388_010953-T1|Name=CBS51388_010953-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1000bp|location=Sequence derived from alignment at An18:797241..798240+ (Aspergillus niger CBS 513.88)
ATGCCCTCGCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACC
CATCACGGCGCTCCTCATCTACCCAGCGACCCTAATCGTGGGCTCACTCT
TCTCAGTCCTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGC
ACCCTCCACCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCT
CAACCTCTCCTTCCCTCCGCCGCGCCGCGTCAACTACTTCGCCCGCAAAG
ACAACATCTTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACC
GCCGCCCTCGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGC
CAGCCACCGCGCCCGACGCACTGGCCAGGCCGTCCTCCGCTACGTCCTCG
CCACAACAGTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATT
ATTGACCGCAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCC
GCTAGCGGAGAACGAGCCTGCCGCGGCAGATGTCAAGACGCTGCTTACGG
CTGCGGCGTGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTT
AGTGGGCATGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGA
GTTGGTGGGTGGTAGTCATGGATGGGGGAAGGGAGGTGGTGTAAATGTGA
ATGGGTCGGCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTT
TGGTCTGGGCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTT
GTTGATGACGGGGATTTGGTTCCATACGTGGTTTGAGAAGGTATGTTACT
GTCTGATTGGGAGTGGAGTGATAATGATGATGATGCTAATGATTGCAGTT
GACGGGGCTGTTGATTGCCCTCGGCACGGTTTATACGATTTACATCCTGC
CTCGACGGGTCTTGCCATGGAGGAATGTGGTAGGATTGCCGGGTGTCTGA
back to topCoding sequence (CDS) from alignment at An18:797241..798240+ >CBS51388_010953-T1 ID=CBS51388_010953-T1|Name=CBS51388_010953-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1884bp|location=Sequence derived from alignment at An18:797241..798240+ (Aspergillus niger CBS 513.88)
ATGCCCTCGCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACC
CATCACGGCGCTCCTCATCTACCCAGCGACCCTAATCGTGGGCTCACTCT
TCTCAGTCCTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGC
ACCCTCCACCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCT
CAACCTCTCCTTCCCTCCGCCGCGCCGCGTCAACTACTTCGCCCGCAAAG
ACAACATCTTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACC
GCCGCCCTCGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGC
CAGCCACCGCGCCCGACGCACTGGCCAGGCCGTCCTCCGCTACGTCCTCG
CCACAACAGTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATT
ATTGACCGCAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCC
GCTAGCGGAGAACGAGCCTGCCGCGGCAGATGTCAAGACGCTGCTTACGG
CTGCGGCGTGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTT
AGTGGGCATGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGA
GTTGGTGGGTGGTAGTCATGGATGGGGGAAGGGAGGTGGTGTAAATGTGA
ATGGGTCGGCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTT
TGGTCTGGGCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTT
GTTGATGACGGGGATTTGGTTCCATACGTGGTTTGAGAAGTTGACGGGGC
TGTTGATTGCCCTCGGCACGGTTTATACGATTTACATCCTGCCTCGACGG
GTCTTGCCATGGAGGAATGTGGTAGGATTGCCGGGTGTCTGAATGCCCTC
GCCCGACCCTCCTGCCCCAGCGATACGACCCTTCCAACCACCCATCACGG
CGCTCCTCATCTACCCAGCGACCCTAATCGTGGGCTCACTCTTCTCAGTC
CTCTCTCCCACCGCGCAAGGCACGCGCGATGACGGTTCCAGCACCCTCCA
CCCACACGCCGAGCCCCTAGCCCCGTCCATCGCGTCGGACCTCAACCTCT
CCTTCCCTCCGCCGCGCCGCGTCAACTACTTCGCCCGCAAAGACAACATC
TTCAACCTATACTTTGTCAAAGTCGGCTGGCTCTGGACCACCGCCGCCCT
CGCTTTTATCCTACTCTCCCAGCCCGCCTACACCCTCGCCGCCAGCCACC
GCGCCCGACGCACTGGCCAGGCCGTCCTCCGCTACGTCCTCGCCACAACA
GTATGGTACCTCACGACGCAATGGTTCTTTGGCCCGCCGATTATTGACCG
CAGCTTTGTGCTGACGGGTGGGAAATGTGAGCAGGCGGTGCCGCTAGCGG
AGAACGAGCCTGCCGCGGCAGATGTCAAGACGCTGCTTACGGCTGCGGCG
TGTAAACATGCTGGTGGGGCGTGGAAGGGTGGTCATGATGTTAGTGGGCA
TGTATTTTTGTTGGTGTTGGCGACGTCGTTGGTTGTGTTTGAGTTGGTGG
GTGGTAGTCATGGATGGGGGAAGGGAGGTGGTGTAAATGTGAATGGGTCG
GCGGAGAAGGAGGAGAGTGAGGAGGTGGATATGGTGAGGGTTTGGTCTGG
GCGGTTTGCTTGGGCGGTTGCTGGGCTGGGGTGGTGGATGTTGTTGATGA
CGGGGATTTGGTTCCATACGTGGTTTGAGAAGTTGACGGGGCTGTTGATT
GCCCTCGGCACGGTTTATACGATTTACATCCTGCCTCGACGGGTCTTGCC
ATGGAGGAATGTGGTAGGATTGCCGGGTGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005789 | endoplasmic reticulum membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019915 | lipid storage |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019388 |
| DBxref | PFAM:PF10261 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:797241..798240 + |
|
