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CBS51388_010982-T1, CBS51388_010982-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010982-T1
Unique NameCBS51388_010982-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:893776..896287-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010982-T1 ID=CBS51388_010982-T1|Name=CBS51388_010982-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2512bp|location=Sequence derived from alignment at An18:893776..896287- (Aspergillus niger CBS 513.88)
ATGTCCACTTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTCTCGCC
CAGGAACGGGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGACGCCC
ACGGCATCCCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCTGCGTC
ACCTGCCGTCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGCTCCAA
CTGCGTCAAGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAGGGCAC
CGCGCAAAGTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCTTAAGG
CGCCTCGAGGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACTGGTGC
TGCGGCATCTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCACCCAC
AAAATCCACCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTGAAGGC
GACGGAGATGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGATCCTAC
CAGACCTATAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATTGGTTA
TCGACGAGGGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAAGTCTC
GGAGATGAGGTGAATACTACTCCCTGTCCTTCTCTTATATCTGTAACGAT
GCTAATGTCAATAGATTGAGGAGTTGCAAGATATCCTAGATCCGTCGTCT
TCGGACGAGGAAGACTATTCGTCTCCCGAGACATCGTCCAGCCAGTCGGC
CAACCATGATGGCTTTTTATTCGGGTTCTATTCCGTTTCCCACTCACTAC
ACGATTTTCTTCCGCCGAGGCCCCAGATTCCCTTGTTATGGAATACCTGG
TTGGAAAACGTGGCGCCCTTGATACCTATCGTGCATAAAGCGAGCGCCAG
GCAGCTATTTACTACGGCTGCCCAAGATCCAAATTGCTTGGATAAGAACT
TTGAGGCGCTATTTCTTGCAATGTGCATGGTCGCGATCATCAGCATGTCG
CCGAGCCAGTGCTCATCTCACCTGGGAGAAGAGAGGGATGTGCTTGTCAA
GCGATACCGGTTCGCAGTCGAGCAGGCACTTTCCAAAGCAGATCTTTTGA
ACACGCAAAACATCACTCTCCTACAGGCTGTGGTGATTTTCCTGATAGGC
GTTCGTCGCGAAGACGACACCAAATTTGTCTGGTCTATGACAGCGCTTGT
TCTTCGCCTTGCGCAAGGACTGGGTCTTCATCGGGACGGCACCAACTTTG
GCCTGAAGCCTTATGAAACGGAGATACGCCGACGACTATGGTGGCACATC
TGCTTATTGGACATCCGGGCCGCAGAGGATCACGGTTCTGATGCGCAGAT
TCATGAACGATTGTACGATACTCGACTCCCACTGAATATCAATGACGACG
ACATTACACCAGACATGAAAGAGCCTCCCAAGGAGAGAGTGGGCTGGACG
GAAATGACATTTTGCCTGATTCGCTGCGATATCACGGTCGCTGTGCGTCG
AGTGAGCTACACTTGTCCAAACGGCCATTTCGTTCCGGCAACTCGGCAGC
TCAACCCTGATAACTGCTCCAAGATGATCCGGGCGATCAACGACCGTATT
GAAGACCGATATATCAAACATTGCGACATGAATGTCCCGATTCAGTGGGT
TTGCGCGACGATTGGTCGCCTCATCCTGACCAAGCTGTGGCTCGTCATTC
ATCATCCGATGACCAGGCCTGAACGGGGCCTAACGCTGAGCCACGCCAAT
CGTGAGAGCTTATTTGCTACATCAGTGGAGGTAGCCGAGTTCCAGCGGCT
GCTGGATGGCGACGTCAAAACGTACAAATGGAGCTGGCTCTTTGCCACGA
ACATGCAATGGCATGCCATTGCCTTTGTGCTGTCGGAGCTTTGTGTCCGC
CCACTCAGCCCTCTTACCGACCGAGCATGGAAATGTGTGAGCACCCTGTA
TACAGAGTGGATCAAAAACAGCAAACAGCGGAAAGGCATGCTCTGGCGTC
CACTTTCCCGCCTGATGAAGCGAGCAGCCGCGTTCAGAGCTAAGCAAGAG
GAGATGCGCGCGCAGATGAGTTCCAGCATGATTGCAGCTCACGATGCCGC
AATCCCGAACTGCCCTGGACTCTCAATTATACAGCCCCCGGTTCTGCCCC
GAGCACTGGACTTTCAGGCTTCACCAACAGGCCAGGAGAAGGAGTCTTTG
CGCGGTCTGCCTGAGAACGGCGGAATCGATATCGACCTGCGCGGCGGACC
AGTTAACGTGATCAACGAATTATTCCCCGACACGGACTGGCTCAATCCTG
CCACGGCAGCCAGCATACAGCAGCAGGAGTGCTCGGGCGCGTCGATGGAC
ACGCTAGTGAGACCGACGGAGCCAAGCGAGACCCAGCAGGAGATGCCTAA
TGCGAATCTCAACTGGGAAGAGTGGGATCAGGTTATGACTGATTTCCAGA
TGGACCTGCAAGCGTCCAATACGCAGAATCCTTTTGGCAATGCCCTGGAT
TGGCTTGCTTGA
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Coding sequence (CDS) from alignment at An18:893776..896287-

>CBS51388_010982-T1 ID=CBS51388_010982-T1|Name=CBS51388_010982-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4902bp|location=Sequence derived from alignment at An18:893776..896287- (Aspergillus niger CBS 513.88)
GAGTTGCAAGATATCCTAGATCCGTCGTCTTCGGACGAGGAAGACTATTC
GTCTCCCGAGACATCGTCCAGCCAGTCGGCCAACCATGATGGCTTTTTAT
TCGGGTTCTATTCCGTTTCCCACTCACTACACGATTTTCTTCCGCCGAGG
CCCCAGATTCCCTTGTTATGGAATACCTGGTTGGAAAACGTGGCGCCCTT
GATACCTATCGTGCATAAAGCGAGCGCCAGGCAGCTATTTACTACGGCTG
CCCAAGATCCAAATTGCTTGGATAAGAACTTTGAGGCGCTATTTCTTGCA
ATGTGCATGGTCGCGATCATCAGCATGTCGCCGAGCCAGTGCTCATCTCA
CCTGGGAGAAGAGAGGGATGTGCTTGTCAAGCGATACCGGTTCGCAGTCG
AGCAGGCACTTTCCAAAGCAGATCTTTTGAACACGCAAAACATCACTCTC
CTACAGGCTGTGGTGATTTTCCTGATAGGCGTTCGTCGCGAAGACGACAC
CAAATTTGTCTGGTCTATGACAGCGCTTGTTCTTCGCCTTGCGCAAGGAC
TGGGTCTTCATCGGGACGGCACCAACTTTGGCCTGAAGCCTTATGAAACG
GAGATACGCCGACGACTATGGTGGCACATCTGCTTATTGGACATCCGGGC
CGCAGAGGATCACGGTTCTGATGCGCAGATTCATGAACGATTGTACGATA
CTCGACTCCCACTGAATATCAATGACGACGACATTACACCAGACATGAAA
GAGCCTCCCAAGGAGAGAGTGGGCTGGACGGAAATGACATTTTGCCTGAT
TCGCTGCGATATCACGGTCGCTGTGCGTCGAGTGAGCTACACTTGTCCAA
ACGGCCATTTCGTTCCGGCAACTCGGCAGCTCAACCCTGATAACTGCTCC
AAGATGATCCGGGCGATCAACGACCGTATTGAAGACCGATATATCAAACA
TTGCGACATGAATGTCCCGATTCAGTGGGTTTGCGCGACGATTGGTCGCC
TCATCCTGACCAAGCTGTGGCTCGTCATTCATCATCCGATGACCAGGCCT
GAACGGGGCCTAACGCTGAGCCACGCCAATCGTGAGAGCTTATTTGCTAC
ATCAGTGGAGGTAGCCGAGTTCCAGCGGCTGCTGGATGGCGACGTCAAAA
CGTACAAATGGAGCTGGCTCTTTGCCACGAACATGCAATGGCATGCCATT
GCCTTTGTGCTGTCGGAGCTTTGTGTCCGCCCACTCAGCCCTCTTACCGA
CCGAGCATGGAAATGTGTGAGCACCCTGTATACAGAGTGGATCAAAAACA
GCAAACAGCGGAAAGGCATGCTCTGGCGTCCACTTTCCCGCCTGATGAAG
CGAGCAGCCGCGTTCAGAGCTAAGCAAGAGGAGATGCGCGCGCAGATGAG
TTCCAGCATGATTGCAGCTCACGATGCCGCAATCCCGAACTGCCCTGGAC
TCTCAATTATACAGCCCCCGGTTCTGCCCCGAGCACTGGACTTTCAGGCT
TCACCAACAGGCCAGGAGAAGGAGTCTTTGCGCGGTCTGCCTGAGAACGG
CGGAATCGATATCGACCTGCGCGGCGGACCAGTTAACGTGATCAACGAAT
TATTCCCCGACACGGACTGGCTCAATCCTGCCACGGCAGCCAGCATACAG
CAGCAGGAGTGCTCGGGCGCGTCGATGGACACGCTAGTGAGACCGACGGA
GCCAAGCGAGACCCAGCAGGAGATGCCTAATGCGAATCTCAACTGGGAAG
AGTGGGATCAGGTTATGACTGATTTCCAGATGGACCTGCAAGCGTCCAAT
ACGCAGAATCCTTTTGGCAATGCCCTGGATTGGCTTGCTTGAATGTCCAC
TTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTCTCGCCCAGGAACG
GGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGACGCCCACGGCATC
CCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCTGCGTCACCTGCCG
TCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGCTCCAACTGCGTCA
AGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAGGGCACCGCGCAAA
GTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCTTAAGGCGCCTCGA
GGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACTGGTGCTGCGGCAT
CTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCACCCACAAAATCCA
CCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTGAAGGCGACGGAGA
TGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGATCCTACCAGACCTA
TAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATTGGTTATCGACGAG
GGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAAGTCTCGGAGATGA
GGAGTTGCAAGATATCCTAGATCCGTCGTCTTCGGACGAGGAAGACTATT
CGTCTCCCGAGACATCGTCCAGCCAGTCGGCCAACCATGATGGCTTTTTA
TTCGGGTTCTATTCCGTTTCCCACTCACTACACGATTTTCTTCCGCCGAG
GCCCCAGATTCCCTTGTTATGGAATACCTGGTTGGAAAACGTGGCGCCCT
TGATACCTATCGTGCATAAAGCGAGCGCCAGGCAGCTATTTACTACGGCT
GCCCAAGATCCAAATTGCTTGGATAAGAACTTTGAGGCGCTATTTCTTGC
AATGTGCATGGTCGCGATCATCAGCATGTCGCCGAGCCAGTGCTCATCTC
ACCTGGGAGAAGAGAGGGATGTGCTTGTCAAGCGATACCGGTTCGCAGTC
GAGCAGGCACTTTCCAAAGCAGATCTTTTGAACACGCAAAACATCACTCT
CCTACAGGCTGTGGTGATTTTCCTGATAGGCGTTCGTCGCGAAGACGACA
CCAAATTTGTCTGGTCTATGACAGCGCTTGTTCTTCGCCTTGCGCAAGGA
CTGGGTCTTCATCGGGACGGCACCAACTTTGGCCTGAAGCCTTATGAAAC
GGAGATACGCCGACGACTATGGTGGCACATCTGCTTATTGGACATCCGGG
CCGCAGAGGATCACGGTTCTGATGCGCAGATTCATGAACGATTGTACGAT
ACTCGACTCCCACTGAATATCAATGACGACGACATTACACCAGACATGAA
AGAGCCTCCCAAGGAGAGAGTGGGCTGGACGGAAATGACATTTTGCCTGA
TTCGCTGCGATATCACGGTCGCTGTGCGTCGAGTGAGCTACACTTGTCCA
AACGGCCATTTCGTTCCGGCAACTCGGCAGCTCAACCCTGATAACTGCTC
CAAGATGATCCGGGCGATCAACGACCGTATTGAAGACCGATATATCAAAC
ATTGCGACATGAATGTCCCGATTCAGTGGGTTTGCGCGACGATTGGTCGC
CTCATCCTGACCAAGCTGTGGCTCGTCATTCATCATCCGATGACCAGGCC
TGAACGGGGCCTAACGCTGAGCCACGCCAATCGTGAGAGCTTATTTGCTA
CATCAGTGGAGGTAGCCGAGTTCCAGCGGCTGCTGGATGGCGACGTCAAA
ACGTACAAATGGAGCTGGCTCTTTGCCACGAACATGCAATGGCATGCCAT
TGCCTTTGTGCTGTCGGAGCTTTGTGTCCGCCCACTCAGCCCTCTTACCG
ACCGAGCATGGAAATGTGTGAGCACCCTGTATACAGAGTGGATCAAAAAC
AGCAAACAGCGGAAAGGCATGCTCTGGCGTCCACTTTCCCGCCTGATGAA
GCGAGCAGCCGCGTTCAGAGCTAAGCAAGAGGAGATGCGCGCGCAGATGA
GTTCCAGCATGATTGCAGCTCACGATGCCGCAATCCCGAACTGCCCTGGA
CTCTCAATTATACAGCCCCCGGTTCTGCCCCGAGCACTGGACTTTCAGGC
TTCACCAACAGGCCAGGAGAAGGAGTCTTTGCGCGGTCTGCCTGAGAACG
GCGGAATCGATATCGACCTGCGCGGCGGACCAGTTAACGTGATCAACGAA
TTATTCCCCGACACGGACTGGCTCAATCCTGCCACGGCAGCCAGCATACA
GCAGCAGGAGTGCTCGGGCGCGTCGATGGACACGCTAGTGAGACCGACGG
AGCCAAGCGAGACCCAGCAGGAGATGCCTAATGCGAATCTCAACTGGGAA
GAGTGGGATCAGGTTATGACTGATTTCCAGATGGACCTGCAAGCGTCCAA
TACGCAGAATCCTTTTGGCAATGCCCTGGATTGGCTTGCTTGAATGTCCA
CTTCGTCTGTGATCTCACCTTCAGCCCCATCGTCCCTCTCGCCCAGGAAC
GGGTCTGACGTTGTGCCTGGCCCGCATACCAGCCACGACGCCCACGGCAT
CCCCTCCCATTCCGCACAAGACCACAGCTTGCGCAGCTGCGTCACCTGCC
GTCGGAGAAAAGTTCGCTGCAACAAGAAAACCCCTTGCTCCAACTGCGTC
AAGGCCGGCATCCAGTGTATCTTTCCCCCGCCGGGAAGGGCACCGCGCAA
AGTGAAACGCCCGCAAGATGCGGAGCTCCTGTCTCGCTTAAGGCGCCTCG
AGGGCGTCATTGAACATCTTAGTGAAAAGAAAGCGACTGGTGCTGCGGCA
TCTTCTTCTGATACTTCTTCCCCACGTGTACAACAGCACCCACAAAATCC
ACCCGCACCCCCGGCTAATGCGCAGGCCTCGGCGCCTGAAGGCGACGGAG
ATGGCTGCCCACTTCTTATGGATGCAGCCAAGCTGGATCCTACCAGACCT
ATAGCGCCTCGGAATATCGAGCATGAGTTTGGTCGATTGGTTATCGACGA
GGGTCGAAGCCGTTACGTTAGCAACCGATTCTGGGCAAGTCTCGGAGATG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010982CBS51388_010982Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010982-T1CBS51388_010982-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010982-T1.cdsCBS51388_010982-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010982-T1.exon2CBS51388_010982-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010982-T1.exon1CBS51388_010982-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:893776..896287 -
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