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CBS51388_010984-T1, CBS51388_010984-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010984-T1
Unique NameCBS51388_010984-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:902444..904811+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010984-T1 ID=CBS51388_010984-T1|Name=CBS51388_010984-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2368bp|location=Sequence derived from alignment at An18:902444..904811+ (Aspergillus niger CBS 513.88)
ATGTCGAAAATACCCACAATCCCCCCAGGCGACTCAAATGCCATACCCCA
GGCAGCGACCGCGCAACAATTGAACCGATCGTGCGAGTCGTGTCGAGGAC
TGAAAGTCCGTTGCTTACCCGATCCTTCGACACCCAACCAATGCCAACGA
TGTGTGAAAGCCAACAGACCGTGTGTCTTCGTGGCGCCCCAAAGGCGGCG
ACCACGCAAGCGGACTGACTCGCGGGTCGCTCAGCTAGAGAGAGAGATGC
GACAGATGCGCTCTCTACTCAAGGACAGGTTACGCGTGGATGAAAGCAGT
GCCGAAAGCGTCGGCAGCGAAAGAGAGGACTCACGGGAACCCGACCTAGG
GCCGAGTATCAATGATTCGGTACCCACAGGCACAGATCCTCCAAGCAGCG
CATCGGGGTCAGCTAGACCCATGGACTGTTCACCCAGCTTCTCCTCAACC
CCTCCATATTCGAATACCTTCGACGGTGGTGCCGCTCCCGGCTTAGCTTC
CAATCCTGTATCGTCGAGCTACTCGCTTGAAGCAACTCTAGAAAGAGATG
TCGTCGGGCAAGGCTTGATATCACTGGAATATGCCAACGATTTAGTCGCC
TTCTTTATCACTGAGCTCACGGCCTTTGCTCCAATCGTTGTACTACCTCC
AGATACAACTGCTTACCAACTGCGTTGCTCGAAGCCAGTGCTGTTTCTCT
CAGTCATTGCCGCAGCAGCAGTCTCGTTGGATGCCAACCTAGCCGCTGCT
CTCAACCGTGAGATGATTCGAGTGTATGCCGAACGCTTCTTCATTAATGG
GGACAAGTCCTTGGAATTAGTCCAGGCATTGCTGCTCATGATTGTCTTCT
ACTTCCCGCCCGACTCTCCTTTGAAACTGCAATTCTATCAGTATACTCAT
ATAGCGGCCACGATGGCCCTGGAAATTGGGTTGGCTTCCAAACGACGAGT
GCCCCAAAGCTCCAGTCGCAGGACGAATAGAAAGACAGCATATGACGAGC
CAATGGCGGAACAAGCGAGAGCGATCTTGTTTTGCTATCATTTGACGTCC
ATGTAAGCTTCAATGCGGATGCTGTTGAGACTGACCTGCTAACGGAGGAC
AGTGTCGCTATGAAAACACGCCGGCCGAATTTGCTTCTCTTCAATGACTG
GATGAGCGAGTGCGTGAAGCATTTAGAGCGCTCACCAAATGCAGTCGATA
GACACATGGCCACTTGGTTTGAGCTTCAGCGAGTAGTCGATGAGGCGATG
ACATCCTTTGGGCTTGATGACACGAGTTCGACTGCCCCGCTCACCGAGTC
GCGGCTGCAAGCCGTTTTGAGGTGGTTTGACAACCGCATGCAATCATGGA
AGAAAGATCTATCCATGGAGATGCATACAGGTAAACTTCTCCTGAAGCGG
TCAATGTGGGCACGTATAAAAGCTAATACCATACATCAGTTCCCATGAAT
TTCGAATACCATTACACTAACCTCGCGATCTATGAGCTTGCTGTCGGAGA
AGGTTATCGCGATCCTGATGCGATCAAGCAACAATATTATACTCTCCCAT
CACTGGAGAACAGTGATAAGTCCAAAGGCACGCCACTGAGTGCGGTCCGT
GTAGACTTCACGATCAAGTGGTTGAACGCCGCCCACGAGATGCTCGACTT
CTTCCTAGGCTGCGACACGGAGATGCTGCGGAAGATCCCCAACCTCATCT
ACACCCGGGTCGGAGTAGCGATTCTGTCTCTGCTCAAAATCTACTTCTCC
GTTAGATCTGGCGCCCTAGGGGAGTTTGTGACTGCCGAGTCCGTAAATGT
CGAGAAATATCTGGACGCAATGACCCGGCGTCTAGCGGAGGCAAGCGGTG
GTCAGAAGTACAAGATCCCCAGCCGATGGTATCTTGTTGTCGCCATCAAG
GCTCGAAATTGGTATGATCGCTTTGAGCAGAAACAGATGCAGAGAAATGC
TGGGCTTGTCCCTCAGTTGAGCGCTGGTACGCCAATCTCTCCGAGTCATG
CCGCTTCTCAGAATCCGCTGCCATTTGACCCACAACAGCCAAGTGCGTCA
CTTGTAATGAAGGCGGAGTACTCTTCTATGGTCCCTTTCCAAGCGATGAA
TGTCAATTACGGCGTGCCACCAACGACGGAACAGATATGGCAACCCGACC
AGAGCGGAGCTTATCAAAACATGGTTCACATGAATACTTTTGCCGGCTAC
CAGCCTGCAATGCTGCCTCCTCACTATGGATATGATGTACAGCAACAGCG
AACCCCGCCAGAGAGCGGTCAGCAAGGAAACCCATCGCCGGCAAGAACGG
GTATGGAGCTTGATGAGTGGATGCCGGATGGAAGTATTTTCGCGATGCCT
AGCTTGCCTGGATTCTGA
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Coding sequence (CDS) from alignment at An18:902444..904811+

>CBS51388_010984-T1 ID=CBS51388_010984-T1|Name=CBS51388_010984-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6777bp|location=Sequence derived from alignment at An18:902444..904811+ (Aspergillus niger CBS 513.88)
ATGTCGAAAATACCCACAATCCCCCCAGGCGACTCAAATGCCATACCCCA
GGCAGCGACCGCGCAACAATTGAACCGATCGTGCGAGTCGTGTCGAGGAC
TGAAAGTCCGTTGCTTACCCGATCCTTCGACACCCAACCAATGCCAACGA
TGTGTGAAAGCCAACAGACCGTGTGTCTTCGTGGCGCCCCAAAGGCGGCG
ACCACGCAAGCGGACTGACTCGCGGGTCGCTCAGCTAGAGAGAGAGATGC
GACAGATGCGCTCTCTACTCAAGGACAGGTTACGCGTGGATGAAAGCAGT
GCCGAAAGCGTCGGCAGCGAAAGAGAGGACTCACGGGAACCCGACCTAGG
GCCGAGTATCAATGATTCGGTACCCACAGGCACAGATCCTCCAAGCAGCG
CATCGGGGTCAGCTAGACCCATGGACTGTTCACCCAGCTTCTCCTCAACC
CCTCCATATTCGAATACCTTCGACGGTGGTGCCGCTCCCGGCTTAGCTTC
CAATCCTGTATCGTCGAGCTACTCGCTTGAAGCAACTCTAGAAAGAGATG
TCGTCGGGCAAGGCTTGATATCACTGGAATATGCCAACGATTTAGTCGCC
TTCTTTATCACTGAGCTCACGGCCTTTGCTCCAATCGTTGTACTACCTCC
AGATACAACTGCTTACCAACTGCGTTGCTCGAAGCCAGTGCTGTTTCTCT
CAGTCATTGCCGCAGCAGCAGTCTCGTTGGATGCCAACCTAGCCGCTGCT
CTCAACCGTGAGATGATTCGAGTGTATGCCGAACGCTTCTTCATTAATGG
GGACAAGTCCTTGGAATTAGTCCAGGCATTGCTGCTCATGATTGTCTTCT
ACTTCCCGCCCGACTCTCCTTTGAAACTGCAATTCTATCAGTATACTCAT
ATAGCGGCCACGATGGCCCTGGAAATTGGGTTGGCTTCCAAACGACGAGT
GCCCCAAAGCTCCAGTCGCAGGACGAATAGAAAGACAGCATATGACGAGC
CAATGGCGGAACAAGCGAGAGCGATCTTGTTTTGCTATCATTTGACGTCC
ATTGTCGCTATGAAAACACGCCGGCCGAATTTGCTTCTCTTCAATGACTG
GATGAGCGAGTGCGTGAAGCATTTAGAGCGCTCACCAAATGCAGTCGATA
GACACATGGCCACTTGGTTTGAGCTTCAGCGAGTAGTCGATGAGGCGATG
ACATCCTTTGGGCTTGATGACACGAGTTCGACTGCCCCGCTCACCGAGTC
GCGGCTGCAAGCCGTTTTGAGGTGGTTTGACAACCGCATGCAATCATGGA
AGAAAGATCTATCCATGGAGATGCATACAGTTCCCATGAATTTCGAATAC
CATTACACTAACCTCGCGATCTATGAGCTTGCTGTCGGAGAAGGTTATCG
CGATCCTGATGCGATCAAGCAACAATATTATACTCTCCCATCACTGGAGA
ACAGTGATAAGTCCAAAGGCACGCCACTGAGTGCGGTCCGTGTAGACTTC
ACGATCAAGTGGTTGAACGCCGCCCACGAGATGCTCGACTTCTTCCTAGG
CTGCGACACGGAGATGCTGCGGAAGATCCCCAACCTCATCTACACCCGGG
TCGGAGTAGCGATTCTGTCTCTGCTCAAAATCTACTTCTCCGTTAGATCT
GGCGCCCTAGGGGAGTTTGTGACTGCCGAGTCCGTAAATGTCGAGAAATA
TCTGGACGCAATGACCCGGCGTCTAGCGGAGGCAAGCGGTGGTCAGAAGT
ACAAGATCCCCAGCCGATGGTATCTTGTTGTCGCCATCAAGGCTCGAAAT
TGGTATGATCGCTTTGAGCAGAAACAGATGCAGAGAAATGCTGGGCTTGT
CCCTCAGTTGAGCGCTGGTACGCCAATCTCTCCGAGTCATGCCGCTTCTC
AGAATCCGCTGCCATTTGACCCACAACAGCCAAGTGCGTCACTTGTAATG
AAGGCGGAGTACTCTTCTATGGTCCCTTTCCAAGCGATGAATGTCAATTA
CGGCGTGCCACCAACGACGGAACAGATATGGCAACCCGACCAGAGCGGAG
CTTATCAAAACATGGTTCACATGAATACTTTTGCCGGCTACCAGCCTGCA
ATGCTGCCTCCTCACTATGGATATGATGTACAGCAACAGCGAACCCCGCC
AGAGAGCGGTCAGCAAGGAAACCCATCGCCGGCAAGAACGGGTATGGAGC
TTGATGAGTGGATGCCGGATGGAAGTATTTTCGCGATGCCTAGCTTGCCT
GGATTCTGAATGTCGAAAATACCCACAATCCCCCCAGGCGACTCAAATGC
CATACCCCAGGCAGCGACCGCGCAACAATTGAACCGATCGTGCGAGTCGT
GTCGAGGACTGAAAGTCCGTTGCTTACCCGATCCTTCGACACCCAACCAA
TGCCAACGATGTGTGAAAGCCAACAGACCGTGTGTCTTCGTGGCGCCCCA
AAGGCGGCGACCACGCAAGCGGACTGACTCGCGGGTCGCTCAGCTAGAGA
GAGAGATGCGACAGATGCGCTCTCTACTCAAGGACAGGTTACGCGTGGAT
GAAAGCAGTGCCGAAAGCGTCGGCAGCGAAAGAGAGGACTCACGGGAACC
CGACCTAGGGCCGAGTATCAATGATTCGGTACCCACAGGCACAGATCCTC
CAAGCAGCGCATCGGGGTCAGCTAGACCCATGGACTGTTCACCCAGCTTC
TCCTCAACCCCTCCATATTCGAATACCTTCGACGGTGGTGCCGCTCCCGG
CTTAGCTTCCAATCCTGTATCGTCGAGCTACTCGCTTGAAGCAACTCTAG
AAAGAGATGTCGTCGGGCAAGGCTTGATATCACTGGAATATGCCAACGAT
TTAGTCGCCTTCTTTATCACTGAGCTCACGGCCTTTGCTCCAATCGTTGT
ACTACCTCCAGATACAACTGCTTACCAACTGCGTTGCTCGAAGCCAGTGC
TGTTTCTCTCAGTCATTGCCGCAGCAGCAGTCTCGTTGGATGCCAACCTA
GCCGCTGCTCTCAACCGTGAGATGATTCGAGTGTATGCCGAACGCTTCTT
CATTAATGGGGACAAGTCCTTGGAATTAGTCCAGGCATTGCTGCTCATGA
TTGTCTTCTACTTCCCGCCCGACTCTCCTTTGAAACTGCAATTCTATCAG
TATACTCATATAGCGGCCACGATGGCCCTGGAAATTGGGTTGGCTTCCAA
ACGACGAGTGCCCCAAAGCTCCAGTCGCAGGACGAATAGAAAGACAGCAT
ATGACGAGCCAATGGCGGAACAAGCGAGAGCGATCTTGTTTTGCTATCAT
TTGACGTCCATTGTCGCTATGAAAACACGCCGGCCGAATTTGCTTCTCTT
CAATGACTGGATGAGCGAGTGCGTGAAGCATTTAGAGCGCTCACCAAATG
CAGTCGATAGACACATGGCCACTTGGTTTGAGCTTCAGCGAGTAGTCGAT
GAGGCGATGACATCCTTTGGGCTTGATGACACGAGTTCGACTGCCCCGCT
CACCGAGTCGCGGCTGCAAGCCGTTTTGAGGTGGTTTGACAACCGCATGC
AATCATGGAAGAAAGATCTATCCATGGAGATGCATACAGTTCCCATGAAT
TTCGAATACCATTACACTAACCTCGCGATCTATGAGCTTGCTGTCGGAGA
AGGTTATCGCGATCCTGATGCGATCAAGCAACAATATTATACTCTCCCAT
CACTGGAGAACAGTGATAAGTCCAAAGGCACGCCACTGAGTGCGGTCCGT
GTAGACTTCACGATCAAGTGGTTGAACGCCGCCCACGAGATGCTCGACTT
CTTCCTAGGCTGCGACACGGAGATGCTGCGGAAGATCCCCAACCTCATCT
ACACCCGGGTCGGAGTAGCGATTCTGTCTCTGCTCAAAATCTACTTCTCC
GTTAGATCTGGCGCCCTAGGGGAGTTTGTGACTGCCGAGTCCGTAAATGT
CGAGAAATATCTGGACGCAATGACCCGGCGTCTAGCGGAGGCAAGCGGTG
GTCAGAAGTACAAGATCCCCAGCCGATGGTATCTTGTTGTCGCCATCAAG
GCTCGAAATTGGTATGATCGCTTTGAGCAGAAACAGATGCAGAGAAATGC
TGGGCTTGTCCCTCAGTTGAGCGCTGGTACGCCAATCTCTCCGAGTCATG
CCGCTTCTCAGAATCCGCTGCCATTTGACCCACAACAGCCAAGTGCGTCA
CTTGTAATGAAGGCGGAGTACTCTTCTATGGTCCCTTTCCAAGCGATGAA
TGTCAATTACGGCGTGCCACCAACGACGGAACAGATATGGCAACCCGACC
AGAGCGGAGCTTATCAAAACATGGTTCACATGAATACTTTTGCCGGCTAC
CAGCCTGCAATGCTGCCTCCTCACTATGGATATGATGTACAGCAACAGCG
AACCCCGCCAGAGAGCGGTCAGCAAGGAAACCCATCGCCGGCAAGAACGG
GTATGGAGCTTGATGAGTGGATGCCGGATGGAAGTATTTTCGCGATGCCT
AGCTTGCCTGGATTCTGAATGTCGAAAATACCCACAATCCCCCCAGGCGA
CTCAAATGCCATACCCCAGGCAGCGACCGCGCAACAATTGAACCGATCGT
GCGAGTCGTGTCGAGGACTGAAAGTCCGTTGCTTACCCGATCCTTCGACA
CCCAACCAATGCCAACGATGTGTGAAAGCCAACAGACCGTGTGTCTTCGT
GGCGCCCCAAAGGCGGCGACCACGCAAGCGGACTGACTCGCGGGTCGCTC
AGCTAGAGAGAGAGATGCGACAGATGCGCTCTCTACTCAAGGACAGGTTA
CGCGTGGATGAAAGCAGTGCCGAAAGCGTCGGCAGCGAAAGAGAGGACTC
ACGGGAACCCGACCTAGGGCCGAGTATCAATGATTCGGTACCCACAGGCA
CAGATCCTCCAAGCAGCGCATCGGGGTCAGCTAGACCCATGGACTGTTCA
CCCAGCTTCTCCTCAACCCCTCCATATTCGAATACCTTCGACGGTGGTGC
CGCTCCCGGCTTAGCTTCCAATCCTGTATCGTCGAGCTACTCGCTTGAAG
CAACTCTAGAAAGAGATGTCGTCGGGCAAGGCTTGATATCACTGGAATAT
GCCAACGATTTAGTCGCCTTCTTTATCACTGAGCTCACGGCCTTTGCTCC
AATCGTTGTACTACCTCCAGATACAACTGCTTACCAACTGCGTTGCTCGA
AGCCAGTGCTGTTTCTCTCAGTCATTGCCGCAGCAGCAGTCTCGTTGGAT
GCCAACCTAGCCGCTGCTCTCAACCGTGAGATGATTCGAGTGTATGCCGA
ACGCTTCTTCATTAATGGGGACAAGTCCTTGGAATTAGTCCAGGCATTGC
TGCTCATGATTGTCTTCTACTTCCCGCCCGACTCTCCTTTGAAACTGCAA
TTCTATCAGTATACTCATATAGCGGCCACGATGGCCCTGGAAATTGGGTT
GGCTTCCAAACGACGAGTGCCCCAAAGCTCCAGTCGCAGGACGAATAGAA
AGACAGCATATGACGAGCCAATGGCGGAACAAGCGAGAGCGATCTTGTTT
TGCTATCATTTGACGTCCATTGTCGCTATGAAAACACGCCGGCCGAATTT
GCTTCTCTTCAATGACTGGATGAGCGAGTGCGTGAAGCATTTAGAGCGCT
CACCAAATGCAGTCGATAGACACATGGCCACTTGGTTTGAGCTTCAGCGA
GTAGTCGATGAGGCGATGACATCCTTTGGGCTTGATGACACGAGTTCGAC
TGCCCCGCTCACCGAGTCGCGGCTGCAAGCCGTTTTGAGGTGGTTTGACA
ACCGCATGCAATCATGGAAGAAAGATCTATCCATGGAGATGCATACAGTT
CCCATGAATTTCGAATACCATTACACTAACCTCGCGATCTATGAGCTTGC
TGTCGGAGAAGGTTATCGCGATCCTGATGCGATCAAGCAACAATATTATA
CTCTCCCATCACTGGAGAACAGTGATAAGTCCAAAGGCACGCCACTGAGT
GCGGTCCGTGTAGACTTCACGATCAAGTGGTTGAACGCCGCCCACGAGAT
GCTCGACTTCTTCCTAGGCTGCGACACGGAGATGCTGCGGAAGATCCCCA
ACCTCATCTACACCCGGGTCGGAGTAGCGATTCTGTCTCTGCTCAAAATC
TACTTCTCCGTTAGATCTGGCGCCCTAGGGGAGTTTGTGACTGCCGAGTC
CGTAAATGTCGAGAAATATCTGGACGCAATGACCCGGCGTCTAGCGGAGG
CAAGCGGTGGTCAGAAGTACAAGATCCCCAGCCGATGGTATCTTGTTGTC
GCCATCAAGGCTCGAAATTGGTATGATCGCTTTGAGCAGAAACAGATGCA
GAGAAATGCTGGGCTTGTCCCTCAGTTGAGCGCTGGTACGCCAATCTCTC
CGAGTCATGCCGCTTCTCAGAATCCGCTGCCATTTGACCCACAACAGCCA
AGTGCGTCACTTGTAATGAAGGCGGAGTACTCTTCTATGGTCCCTTTCCA
AGCGATGAATGTCAATTACGGCGTGCCACCAACGACGGAACAGATATGGC
AACCCGACCAGAGCGGAGCTTATCAAAACATGGTTCACATGAATACTTTT
GCCGGCTACCAGCCTGCAATGCTGCCTCCTCACTATGGATATGATGTACA
GCAACAGCGAACCCCGCCAGAGAGCGGTCAGCAAGGAAACCCATCGCCGG
CAAGAACGGGTATGGAGCTTGATGAGTGGATGCCGGATGGAAGTATTTTC
GCGATGCCTAGCTTGCCTGGATTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010984CBS51388_010984Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010984-T1.exon1CBS51388_010984-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010984-T1.exon2CBS51388_010984-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010984-T1.exon3CBS51388_010984-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010984-T1.cdsCBS51388_010984-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010984-T1CBS51388_010984-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:902444..904811 +
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