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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1001628..1002750- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011016-T1 ID=CBS51388_011016-T1|Name=CBS51388_011016-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1123bp|location=Sequence derived from alignment at An18:1001628..1002750- (Aspergillus niger CBS 513.88)
ATGGAGCTCCCCTTCAGCCTGGTGGATACAGCTCTTTCCTCCACGCACAT
TGACGCCATCGACGCCCTTCGAGCCTTTTTCCTTTTGGCATCCTGCACGG
TATGCACCGATATGTTGCCATCCCAAATTCGAGGCGGACGACGTTGCAAA
GTGACCCTGCATCAACTAAACCCAGAATATCCCAACTAGATACTCTCCGT
CAGCATCCTGCCAGATTCGCTTCATTCACGCTTCATTCCTTATGGCGCTC
GTACAACTTCGACGGCCGACTCGCAGTCCTCGCAGTCCTCGCCCCCGGCG
TCCTCGGACTCCTCCCCAGCCGCCCGCGCTCTTGACTACGCTGCCGCCTT
GACAGTCCCTCACAGCTACTTCACGCAATTCTACATTGCCTCCGTTTTGG
CCTCGGTCTTCTGGGCTGCGCAGCTTCTGTGTCAAGGAGCCGTGTTCCAG
GCCTTTGCAACGAGAATCAGTCCGGAACATATGCAACAGTCCATGTCCAT
ACACCAAGTCTTCTTGTGCTGGGCGCTCATGCTCATTCAGGGTGCAAGGC
GGCTATATGAGTGCAAGGCCTTCGCCAAGCCTTCAGCCTCAAGAATGTGG
TTTGTTCACTGGCTCGTAGGCCTTGCATTTTACCTAGCAGTATCCGTTGC
CTTATGGATCGAAGGAGCAGGTACCACTCTGACTGACAGGCTAAAATACC
GAACCCCACTGATTGCATCTAGGAGCCCTGCTGTCTCATAAAGTGATTCT
CGACGACCTCAAGGTTACAATAGCACCCTCTCTCCGCACCTTTGTCTGCA
TTCCTCTTTTCTTGATTGCATCAGGCATCCAACACGACTGCCACCATTAC
CTCTTCTCTTTGAAGAAATATACCCTGCCCACTCACCCCATCTTTCGCAG
GATCGTATGTCCACATTATACGGCAGAGTGTGTGATATATCTTTCGTTGG
CTCTGCTGGGCGCGCCCAAGGGCGAGGTCGTAAACAAGTCGTTGTTGTCC
GCTCTCGTATTTGTTGTTATCAACTTGGGCGTCACCGCTGCGAACACTAG
GCATTGGTATATGCGAAAATTCGGCGAGGAGTCTGTGCGGGAAAGATCGA
ACATGATCCCTTGGGTTTACTAA back to topCoding sequence (CDS) from alignment at An18:1001628..1002750- >CBS51388_011016-T1 ID=CBS51388_011016-T1|Name=CBS51388_011016-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2943bp|location=Sequence derived from alignment at An18:1001628..1002750- (Aspergillus niger CBS 513.88)
GAGCCCTGCTGTCTCATAAAGTGATTCTCGACGACCTCAAGGTTACAATA
GCACCCTCTCTCCGCACCTTTGTCTGCATTCCTCTTTTCTTGATTGCATC
AGGCATCCAACACGACTGCCACCATTACCTCTTCTCTTTGAAGAAATATA
CCCTGCCCACTCACCCCATCTTTCGCAGGATCGTATGTCCACATTATACG
GCAGAGTGTGTGATATATCTTTCGTTGGCTCTGCTGGGCGCGCCCAAGGG
CGAGGTCGTAAACAAGTCGTTGTTGTCCGCTCTCGTATTTGTTGTTATCA
ACTTGGGCGTCACCGCTGCGAACACTAGGCATTGGTATATGCGAAAATTC
GGCGAGGAGTCTGTGCGGGAAAGATCGAACATGATCCCTTGGGTTTACTA
AATACTCTCCGTCAGCATCCTGCCAGATTCGCTTCATTCACGCTTCATTC
CTTATGGCGCTCGTACAACTTCGACGGCCGACTCGCAGTCCTCGCAGTCC
TCGCCCCCGGCGTCCTCGGACTCCTCCCCAGCCGCCCGCGCTCTTGACTA
CGCTGCCGCCTTGACAGTCCCTCACAGCTACTTCACGCAATTCTACATTG
CCTCCGTTTTGGCCTCGGTCTTCTGGGCTGCGCAGCTTCTGTGTCAAGGA
GCCGTGTTCCAGGCCTTTGCAACGAGAATCAGTCCGGAACATATGCAACA
GTCCATGTCCATACACCAAGTCTTCTTGTGCTGGGCGCTCATGCTCATTC
AGGGTGCAAGGCGGCTATATGAGTGCAAGGCCTTCGCCAAGCCTTCAGCC
TCAAGAATGTGGTTTGTTCACTGGCTCGTAGGCCTTGCATTTTACCTAGC
AGTATCCGTTGCCTTATGGATCGAAGGAGCAGATGGAGCTCCCCTTCAGC
CTGGTGGATACAGCTCTTTCCTCCACGCACATTGACGCCATCGACGCCCT
TCGAGCCTTTTTCCTTTTGGCATCCTGCACGGAGCCCTGCTGTCTCATAA
AGTGATTCTCGACGACCTCAAGGTTACAATAGCACCCTCTCTCCGCACCT
TTGTCTGCATTCCTCTTTTCTTGATTGCATCAGGCATCCAACACGACTGC
CACCATTACCTCTTCTCTTTGAAGAAATATACCCTGCCCACTCACCCCAT
CTTTCGCAGGATCGTATGTCCACATTATACGGCAGAGTGTGTGATATATC
TTTCGTTGGCTCTGCTGGGCGCGCCCAAGGGCGAGGTCGTAAACAAGTCG
TTGTTGTCCGCTCTCGTATTTGTTGTTATCAACTTGGGCGTCACCGCTGC
GAACACTAGGCATTGGTATATGCGAAAATTCGGCGAGGAGTCTGTGCGGG
AAAGATCGAACATGATCCCTTGGGTTTACTAAATACTCTCCGTCAGCATC
CTGCCAGATTCGCTTCATTCACGCTTCATTCCTTATGGCGCTCGTACAAC
TTCGACGGCCGACTCGCAGTCCTCGCAGTCCTCGCCCCCGGCGTCCTCGG
ACTCCTCCCCAGCCGCCCGCGCTCTTGACTACGCTGCCGCCTTGACAGTC
CCTCACAGCTACTTCACGCAATTCTACATTGCCTCCGTTTTGGCCTCGGT
CTTCTGGGCTGCGCAGCTTCTGTGTCAAGGAGCCGTGTTCCAGGCCTTTG
CAACGAGAATCAGTCCGGAACATATGCAACAGTCCATGTCCATACACCAA
GTCTTCTTGTGCTGGGCGCTCATGCTCATTCAGGGTGCAAGGCGGCTATA
TGAGTGCAAGGCCTTCGCCAAGCCTTCAGCCTCAAGAATGTGGTTTGTTC
ACTGGCTCGTAGGCCTTGCATTTTACCTAGCAGTATCCGTTGCCTTATGG
ATCGAAGGAGCAGATGGAGCTCCCCTTCAGCCTGGTGGATACAGCTCTTT
CCTCCACGCACATTGACGCCATCGACGCCCTTCGAGCCTTTTTCCTTTTG
GCATCCTGCACGGAGCCCTGCTGTCTCATAAAGTGATTCTCGACGACCTC
AAGGTTACAATAGCACCCTCTCTCCGCACCTTTGTCTGCATTCCTCTTTT
CTTGATTGCATCAGGCATCCAACACGACTGCCACCATTACCTCTTCTCTT
TGAAGAAATATACCCTGCCCACTCACCCCATCTTTCGCAGGATCGTATGT
CCACATTATACGGCAGAGTGTGTGATATATCTTTCGTTGGCTCTGCTGGG
CGCGCCCAAGGGCGAGGTCGTAAACAAGTCGTTGTTGTCCGCTCTCGTAT
TTGTTGTTATCAACTTGGGCGTCACCGCTGCGAACACTAGGCATTGGTAT
ATGCGAAAATTCGGCGAGGAGTCTGTGCGGGAAAGATCGAACATGATCCC
TTGGGTTTACTAAATACTCTCCGTCAGCATCCTGCCAGATTCGCTTCATT
CACGCTTCATTCCTTATGGCGCTCGTACAACTTCGACGGCCGACTCGCAG
TCCTCGCAGTCCTCGCCCCCGGCGTCCTCGGACTCCTCCCCAGCCGCCCG
CGCTCTTGACTACGCTGCCGCCTTGACAGTCCCTCACAGCTACTTCACGC
AATTCTACATTGCCTCCGTTTTGGCCTCGGTCTTCTGGGCTGCGCAGCTT
CTGTGTCAAGGAGCCGTGTTCCAGGCCTTTGCAACGAGAATCAGTCCGGA
ACATATGCAACAGTCCATGTCCATACACCAAGTCTTCTTGTGCTGGGCGC
TCATGCTCATTCAGGGTGCAAGGCGGCTATATGAGTGCAAGGCCTTCGCC
AAGCCTTCAGCCTCAAGAATGTGGTTTGTTCACTGGCTCGTAGGCCTTGC
ATTTTACCTAGCAGTATCCGTTGCCTTATGGATCGAAGGAGCAGATGGAG
CTCCCCTTCAGCCTGGTGGATACAGCTCTTTCCTCCACGCACATTGACGC
CATCGACGCCCTTCGAGCCTTTTTCCTTTTGGCATCCTGCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001104 |
| DBxref | PFAM:PF02544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1001628..1002750 - |
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