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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1014689..1015895+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011020-T1 ID=CBS51388_011020-T1|Name=CBS51388_011020-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1207bp|location=Sequence derived from alignment at An18:1014689..1015895+ (Aspergillus niger CBS 513.88)
ATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGGCT
CTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAGTA
CTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTATGC
AAGAGATTTCAAGGCTACGAAGCAGAGTACATATCCACCAACCCTGTTGG
GCAAGCCATGCAGCTAACCTCGAGTGACCAGTGACATTGAGCACATATGG
CAAATGGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTC
CGCCATTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGAC
TTGGTGTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTG
TCCGTCTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGC
CGGGAAAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCA
CTGAGGACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTT
GAACGACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTT
CCACGGCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGG
AGCCGCACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCC
GAAGCGATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGG
CGAGCGTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGA
GCGTCGACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAG
CTACGACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCC
GCATTGCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACT
TGGCGACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTAT
AATACGGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAG
TGTGTTCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGAT
TGGGGATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCT
GAACCTTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGA
GTGGTAG back to topCoding sequence (CDS) from alignment at An18:1014689..1015895+ >CBS51388_011020-T1 ID=CBS51388_011020-T1|Name=CBS51388_011020-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2304bp|location=Sequence derived from alignment at An18:1014689..1015895+ (Aspergillus niger CBS 513.88)
ATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGGCT
CTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAGTA
CTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTATGC
AAGAGATTTCAAGGCTACGAAGCAGATGACATTGAGCACATATGGCAAAT
GGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTCCGCCA
TTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGACTTGGT
GTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTGTCCGT
CTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGCCGGGA
AAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCACTGAG
GACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTTGAACG
ACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTTCCACG
GCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGGAGCCG
CACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCCGAAGC
GATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGGCGAGC
GTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGAGCGTC
GACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAGCTACG
ACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCCGCATT
GCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACTTGGCG
ACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTATAATAC
GGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAGTGTGT
TCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGATTGGGG
ATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCTGAACC
TTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGAGTGGT
AGATGGTCAAGATCAAGTCTATCGAGTACTTCCGCGTCCCTCCCCGCTGG
CTCTTCGTTAAGATCGTCGACGAAGATGGCCAATGCGGTTGGGGCGAAAG
TACTTTAGAAGGCCATACCGAGGCCGTCGAAGGCACATTGAATGCACTAT
GCAAGAGATTTCAAGGCTACGAAGCAGATGACATTGAGCACATATGGCAA
ATGGCCTGGCGTCTGGGCTTCTACCGCGGGGGCCCGGTCTTCATGTCCGC
CATTTCAGGAATTGACATCGCACTCTGGGATCTGAAGGGCCGTCGACTTG
GTGTCCCCATCTACCAGCTCCTCGGAGGCAAAGTCCGGAACAAACTGTCC
GTCTATGCATGGATTGGAGGAGACCGGCCCTCCGATGTCGAAGCGGCCGG
GAAAGCTCGTCTCGCGCAGGGCTTCAAAGCCATTAAGATGAATGCCACTG
AGGACATCAACTGGCTCGATTCCCCCCGTGCGTTGGACTCCTCCGTTGAA
CGACTGAAAACCGTCAAAGCTCTCGGCTTAGACGCAGCCCTCGACTTCCA
CGGCCGCCTTCACAAACCAATGGCCAAACAGCTCGCCAAAGCCCTGGAGC
CGCACCGCCCTCTTTTCCTGGAGGAGCCGCTCCTCTCTGAACACCCCGAA
GCGATCAAGCAGCTATCAGATCAAGTTTCTTGCCCTATTGCCCTTGGCGA
GCGTCTCTACAGCCGCTGGGACGTTAAACGCTTCCTGGAAGACGCGAGCG
TCGACATTCTTCAACCTGATATCGCTCACTGCGGAGGCATCTCCGAGCTA
CGACGTATAGCGTCCATGGCGGAAACGTACGATGTTGCGATTGCCCCGCA
TTGCCCCCTGGGGTCCATTGCTTTGGCGGCATGTATGCAAGTGGACTTGG
CGACCCCTAACTTCGTCATTCAAGAGATGAGCCTGGGGATGCACTATAAT
ACGGAAGCGGGCGAATATGATATTACTAGCTATGTCAAGGATCCCAGTGT
GTTCGCCGTTAAGGATGGATACGTGGATGCTTTGACGGCACCGGGATTGG
GGATTGAAGTGAACGAAGAGCTGGTCAGGCAGTTGGCGGTCAATTCTGAA
CCTTGGCCGCCTAAGGAATTCTTTGGACCTGATGGAGGGATCCGGGAGTG
GTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009063 | cellular amino acid catabolic process |
| GO:0034194 | D-galactonate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008869 | galactonate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018110 |
| DBxref | InterPro:IPR023592 |
| DBxref | InterPro:IPR036849 |
| DBxref | InterPro:IPR029065 |
| DBxref | InterPro:IPR029017 |
| DBxref | InterPro:IPR013341 |
| DBxref | InterPro:IPR013342 |
| DBxref | PFAM:PF02746 |
| DBxref | PFAM:PF13378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1014689..1015895 + |
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