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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1023206..1025038- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011023-T1 ID=CBS51388_011023-T1|Name=CBS51388_011023-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1833bp|location=Sequence derived from alignment at An18:1023206..1025038- (Aspergillus niger CBS 513.88)
ATGGACACAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTC
CTGGCTTGATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGG
ATTATCAAGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGC
GTCGATATCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACC
CCCGAGTTCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAAC
CGGGCATGCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCA
GTGCCAACCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATC
TACCGGCAAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTG
GAAAGTCGAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGAC
CGTCGGCGGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAAC
AGACATTGGAGGTAAAGCGTTCTCTGATCCCACTGAGGGAAGATTCTTCA
GACTAATCAGTGCGATTTGCAGCATTATTCGGTGTCGAGAGAAGGTATAG
TTATTCTTCTTGAATCCCCATCTCCCCGGATACCCGTCTAACTGACATTG
TTTTCTGTTCAAAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTA
TCTTAATCCGGACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAA
GAGTCCCAGATATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAA
AAACAGGGCTATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTTTT
CTTTGCTAGTACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTA
CAAGTTGGTTGGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAAGG
AATCGCAAGGGCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCTAC
TTGTTTAAGCATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGT
TGCTCTCGCCTACATCCCCAACAGGCTTTCTATCACCATTGCCATTATCG
CCCGTCCAGAGCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGC
AGAAATTGCCAGTGACTATCAACACACGCATACCAAGAGTACAACATCGC
TGGACACAACATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACT
TTCGTGACGGAAAGTCCATTCACTCCTACTAGCCAGTCTCTTGGTTCATC
CGCGGACGGCAATTCCACCAGACCACGCAGCCAAACATTTCCGCTCAGTT
CGTCTGACCCGAGTCTTAGGCCACTACGAAAACTCCGAGCATTTGACAAA
AGCCGCGCTACGACAGGCACTCTCAGTCTCAGAACATCAATCTTCCCCTG
ACGACCATCACGATCAGAAAATTCTCCCAGCGCTTGACACGTCGGCGAAT
ACAATCAAACGCAATCGCAGCAACCCGGAGTTTAAAGCCAAGTCCATATA
CCCACCGTTGTTCTCAAAGTCGAACACTGTGTCTCCAGTTAGCTCCCCGG
GTTCGCCAACCCAGGATGAAGCTAGGAGAGCACTAGAACTTGTGATGAAC
TACTTTAAACAGCAGCCTTCAGGACTTGGGGCAGACGATTATATGACAAT
TGGGAAGCTGATGGAAAGGCTTGAGCTCGCCAAGGCACAGCAAGTGACAC
TCCCAGGGGGCCTCACTCGAATCGACGAACACGATGATTCGCCACAACTG
AACAGGAAGAGAAGTATCCACAGTCTTGGCTAG back to topCoding sequence (CDS) from alignment at An18:1023206..1025038- >CBS51388_011023-T1 ID=CBS51388_011023-T1|Name=CBS51388_011023-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6504bp|location=Sequence derived from alignment at An18:1023206..1025038- (Aspergillus niger CBS 513.88)
GCCACTACGAAAACTCCGAGCATTTGACAAAAGCCGCGCTACGACAGGCA
CTCTCAGTCTCAGAACATCAATCTTCCCCTGACGACCATCACGATCAGAA
AATTCTCCCAGCGCTTGACACGTCGGCGAATACAATCAAACGCAATCGCA
GCAACCCGGAGTTTAAAGCCAAGTCCATATACCCACCGTTGTTCTCAAAG
TCGAACACTGTGTCTCCAGTTAGCTCCCCGGGTTCGCCAACCCAGGATGA
AGCTAGGAGAGCACTAGAACTTGTGATGAACTACTTTAAACAGCAGCCTT
CAGGACTTGGGGCAGACGATTATATGACAATTGGGAAGCTGATGGAAAGG
CTTGAGCTCGCCAAGGCACAGCAAGTGACACTCCCAGGGGGCCTCACTCG
AATCGACGAACACGATGATTCGCCACAACTGAACAGGAAGAGAAGTATCC
ACAGTCTTGGCTAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTA
TCTTAATCCGGACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAA
GAGTCCCAGATATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAA
AAACAGGGCTATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTTTT
CTTTGCTAGTACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTA
CAAGTTGGTTGGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAAGG
AATCGCAAGGGCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCTAC
TTGTTTAAGCATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGT
TGCTCTCGCCTACATCCCCAACAGGCTTTCTATCACCATTGCCATTATCG
CCCGTCCAGAGCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGC
AGAAATTGCCAGTGACTATCAACACACGCATACCAAGAGTACAACATCGC
TGGACACAACATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACT
TTCGTGACGGAAAGTCCATTCACTCCTACTAGCCAGTCTCTTGCATTATT
CGGTGTCGAGAGAAGATGGACACAGAGAGCAGCCATGCGCAGGAACATGA
TTTCGCGCAAACTTCCTGGCTTGATATAGGTGGATTCAGTCCCTCCGAGC
AATCTCCAACGCTGGATTATCAAGCATTTGGATACGGAGTCGTACCACTA
GACCCGTCCTATGGCGTCGATATCCCTCCACCTTATGAGACATTACCAAT
AGCCATGCCTCCACCCCCGAGTTCCTGGCCTAGTATGCTTTCGAATCAAG
GGCCGTTCCCAGAACCGGGCATGCCAGCTGTACCCTTGATGCAGGCACCA
CCCACACTTGCCCCAGTGCCAACCATTCCAGCAATCCCTCGCAAGGCTTC
CACTAGCAAGGCATCTACCGGCAAGTCGAGCACCGGCAAATCATCCACCG
GCAAGTCGTCCAGTGGAAAGTCGAATAGCAACCCAACGCCACGCAGGACT
CTCACGGATGAAGACCGTCGGCGGATGTGTCTTTATCACGAGGAGAATAA
GACAGCCAAGCAAACAGACATTGGAGGCCACTACGAAAACTCCGAGCATT
TGACAAAAGCCGCGCTACGACAGGCACTCTCAGTCTCAGAACATCAATCT
TCCCCTGACGACCATCACGATCAGAAAATTCTCCCAGCGCTTGACACGTC
GGCGAATACAATCAAACGCAATCGCAGCAACCCGGAGTTTAAAGCCAAGT
CCATATACCCACCGTTGTTCTCAAAGTCGAACACTGTGTCTCCAGTTAGC
TCCCCGGGTTCGCCAACCCAGGATGAAGCTAGGAGAGCACTAGAACTTGT
GATGAACTACTTTAAACAGCAGCCTTCAGGACTTGGGGCAGACGATTATA
TGACAATTGGGAAGCTGATGGAAAGGCTTGAGCTCGCCAAGGCACAGCAA
GTGACACTCCCAGGGGGCCTCACTCGAATCGACGAACACGATGATTCGCC
ACAACTGAACAGGAAGAGAAGTATCCACAGTCTTGGCTAGTACTGTTTCA
AAGGTCCTGCGGCAGAAAGATAAGTATCTTAATCCGGACGATGGCAGTCG
ATCTCCTATCAAAAGGGCCAAAGGAAGAGTCCCAGATATCGAGAAGGCTT
TGTCTAATTGGGCGCGGAACTATCAAAAACAGGGCTATCCGTTGAACGAT
GAGATGATACGTGAGAAGGCCCTTTTCTTTGCTAGTACTTGTGGCAGTTC
AGATGGCAAGGAGAAGGTGCTCAGTACAAGTTGGTTGGAGAAATTTAAAC
GCAAGTATAACTTGATGGGTGCAAGGAATCGCAAGGGCTCCTGGACCAGC
ACAAAGAGCGAATCGGATAGCCCTACTTGTTTAAGCATTGATTCAGCACT
GGCATCTGCCGTCCAGTCGCCCACGTTGCTCTCGCCTACATCCCCAACAG
GCTTTCTATCACCATTGCCATTATCGCCCGTCCAGAGCAATGAGAACATC
AGGGGCGAGCTTGTTCAGAGTCTCGCAGAAATTGCCAGTGACTATCAACA
CACGCATACCAAGAGTACAACATCGCTGGACACAACATGCTCTTTCTCTG
CTGGGCTCACCAGCCCGACATCCACTTTCGTGACGGAAAGTCCATTCACT
CCTACTAGCCAGTCTCTTGCATTATTCGGTGTCGAGAGAAGATGGACACA
GAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTCCTGGCTTGA
TATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGGATTATCAAG
CATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGCGTCGATATC
CCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACCCCCGAGTTC
CTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAACCGGGCATGC
CAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCAGTGCCAACC
ATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATCTACCGGCAA
GTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTGGAAAGTCGA
ATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGACCGTCGGCGG
ATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAACAGACATTGG
AGGCCACTACGAAAACTCCGAGCATTTGACAAAAGCCGCGCTACGACAGG
CACTCTCAGTCTCAGAACATCAATCTTCCCCTGACGACCATCACGATCAG
AAAATTCTCCCAGCGCTTGACACGTCGGCGAATACAATCAAACGCAATCG
CAGCAACCCGGAGTTTAAAGCCAAGTCCATATACCCACCGTTGTTCTCAA
AGTCGAACACTGTGTCTCCAGTTAGCTCCCCGGGTTCGCCAACCCAGGAT
GAAGCTAGGAGAGCACTAGAACTTGTGATGAACTACTTTAAACAGCAGCC
TTCAGGACTTGGGGCAGACGATTATATGACAATTGGGAAGCTGATGGAAA
GGCTTGAGCTCGCCAAGGCACAGCAAGTGACACTCCCAGGGGGCCTCACT
CGAATCGACGAACACGATGATTCGCCACAACTGAACAGGAAGAGAAGTAT
CCACAGTCTTGGCTAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAG
TATCTTAATCCGGACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGG
AAGAGTCCCAGATATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATC
AAAAACAGGGCTATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTT
TTCTTTGCTAGTACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAG
TACAAGTTGGTTGGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAA
GGAATCGCAAGGGCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCT
ACTTGTTTAAGCATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCAC
GTTGCTCTCGCCTACATCCCCAACAGGCTTTCTATCACCATTGCCATTAT
CGCCCGTCCAGAGCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTC
GCAGAAATTGCCAGTGACTATCAACACACGCATACCAAGAGTACAACATC
GCTGGACACAACATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCA
CTTTCGTGACGGAAAGTCCATTCACTCCTACTAGCCAGTCTCTTGCATTA
TTCGGTGTCGAGAGAAGATGGACACAGAGAGCAGCCATGCGCAGGAACAT
GATTTCGCGCAAACTTCCTGGCTTGATATAGGTGGATTCAGTCCCTCCGA
GCAATCTCCAACGCTGGATTATCAAGCATTTGGATACGGAGTCGTACCAC
TAGACCCGTCCTATGGCGTCGATATCCCTCCACCTTATGAGACATTACCA
ATAGCCATGCCTCCACCCCCGAGTTCCTGGCCTAGTATGCTTTCGAATCA
AGGGCCGTTCCCAGAACCGGGCATGCCAGCTGTACCCTTGATGCAGGCAC
CACCCACACTTGCCCCAGTGCCAACCATTCCAGCAATCCCTCGCAAGGCT
TCCACTAGCAAGGCATCTACCGGCAAGTCGAGCACCGGCAAATCATCCAC
CGGCAAGTCGTCCAGTGGAAAGTCGAATAGCAACCCAACGCCACGCAGGA
CTCTCACGGATGAAGACCGTCGGCGGATGTGTCTTTATCACGAGGAGAAT
AAGACAGCCAAGCAAACAGACATTGGAGGCCACTACGAAAACTCCGAGCA
TTTGACAAAAGCCGCGCTACGACAGGCACTCTCAGTCTCAGAACATCAAT
CTTCCCCTGACGACCATCACGATCAGAAAATTCTCCCAGCGCTTGACACG
TCGGCGAATACAATCAAACGCAATCGCAGCAACCCGGAGTTTAAAGCCAA
GTCCATATACCCACCGTTGTTCTCAAAGTCGAACACTGTGTCTCCAGTTA
GCTCCCCGGGTTCGCCAACCCAGGATGAAGCTAGGAGAGCACTAGAACTT
GTGATGAACTACTTTAAACAGCAGCCTTCAGGACTTGGGGCAGACGATTA
TATGACAATTGGGAAGCTGATGGAAAGGCTTGAGCTCGCCAAGGCACAGC
AAGTGACACTCCCAGGGGGCCTCACTCGAATCGACGAACACGATGATTCG
CCACAACTGAACAGGAAGAGAAGTATCCACAGTCTTGGCTAGTACTGTTT
CAAAGGTCCTGCGGCAGAAAGATAAGTATCTTAATCCGGACGATGGCAGT
CGATCTCCTATCAAAAGGGCCAAAGGAAGAGTCCCAGATATCGAGAAGGC
TTTGTCTAATTGGGCGCGGAACTATCAAAAACAGGGCTATCCGTTGAACG
ATGAGATGATACGTGAGAAGGCCCTTTTCTTTGCTAGTACTTGTGGCAGT
TCAGATGGCAAGGAGAAGGTGCTCAGTACAAGTTGGTTGGAGAAATTTAA
ACGCAAGTATAACTTGATGGGTGCAAGGAATCGCAAGGGCTCCTGGACCA
GCACAAAGAGCGAATCGGATAGCCCTACTTGTTTAAGCATTGATTCAGCA
CTGGCATCTGCCGTCCAGTCGCCCACGTTGCTCTCGCCTACATCCCCAAC
AGGCTTTCTATCACCATTGCCATTATCGCCCGTCCAGAGCAATGAGAACA
TCAGGGGCGAGCTTGTTCAGAGTCTCGCAGAAATTGCCAGTGACTATCAA
CACACGCATACCAAGAGTACAACATCGCTGGACACAACATGCTCTTTCTC
TGCTGGGCTCACCAGCCCGACATCCACTTTCGTGACGGAAAGTCCATTCA
CTCCTACTAGCCAGTCTCTTGCATTATTCGGTGTCGAGAGAAGATGGACA
CAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTCCTGGCTT
GATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGGATTATCA
AGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGCGTCGATA
TCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACCCCCGAGT
TCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAACCGGGCAT
GCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCAGTGCCAA
CCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATCTACCGGC
AAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTGGAAAGTC
GAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGACCGTCGGC
GGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAACAGACATT
GGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR007889 |
| DBxref | InterPro:IPR006600 |
| DBxref | PFAM:PF03221 |
| DBxref | PFAM:PF04218 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1023206..1025038 - |
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