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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1083018..1085605- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011045-T1 ID=CBS51388_011045-T1|Name=CBS51388_011045-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2588bp|location=Sequence derived from alignment at An18:1083018..1085605- (Aspergillus niger CBS 513.88)
ATGGAGACCATTTCCAGGATATCCACGATGCTGGAAACAGGTAATGTCAC
CCCGGGCACAGTTGCTCGCCAATTGTCCTCCGCGTCTGGACAAATCGACT
AACTGATCGTGCGAGCAGCTCGTGAGCTCACCCTCGAAGCAGCCCAGTCA
GCAGCCCTGAGTAAGGGGTCTAGCACGGGTTTATCGTCTCGGAATTTGGC
TACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAATGACCGGGAGGTCC
TGGATGGCATGCGCCGGGTGATTACGGTAAGGTCCCAAGATGCCTACATG
CAAGAGTCCATTGTCTGACGCTCTTTTGATTTTGCGCCACATAGTTGATG
TACCGATCCGAACCTTCCCTCCCTTTCTTCTCGGCTGTGGTCAAAAACGT
GGCTAGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCC
ATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATC
CAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCG
TACAATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGG
CAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCA
GCATTGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCA
GCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCC
TTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGAC
CTCATCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGA
CGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGA
AGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGC
TTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCA
TGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCA
AGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGG
TGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCC
TCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTAT
ATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATAC
ACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCT
CAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGA
AGGGTGTGATTCTCAGCGAACTGGAACACTTTTCACAGAGCGCAGACCCA
GACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGA
GCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGA
GTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTC
ATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAA
GCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGC
TGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGAC
ATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAA
GCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGC
GAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATC
GTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGA
CGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCT
GGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGC
GACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACA
ACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGA
GCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTG
GTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCC
TGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACG
ATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGG
CTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAG
GCAACGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGT
CACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACA
GAAACAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGA
GGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAG
AAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGA back to topCoding sequence (CDS) from alignment at An18:1083018..1085605- >CBS51388_011045-T1 ID=CBS51388_011045-T1|Name=CBS51388_011045-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7326bp|location=Sequence derived from alignment at An18:1083018..1085605- (Aspergillus niger CBS 513.88)
TTGATGTACCGATCCGAACCTTCCCTCCCTTTCTTCTCGGCTGTGGTCAA
AAACGTGGCTAGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACT
TGGTCCATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAAT
GCTATCCAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGC
GCTTCGTACAATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGT
CCCTGGCAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAA
GCCGCAGCATTGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCT
CCCTCAGCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACT
TCGTCCTTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGG
ATCGACCTCATCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGA
CATGGACGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACG
CTAGGAAGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCT
GAAGGCTTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAA
CGAGCATGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTA
CTTGCAAGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTT
GTCCGGTGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGT
TGGTCCTCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTG
CGCTATATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACG
AGATACACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTG
GCGCCTCAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGC
ACCTGAAGGGTGTGATTCTCAGCGAACTGGAACACTTTTCACAGAGCGCA
GACCCAGACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACA
GAGTGAGCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAA
TTACGAGTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGA
CACCTCATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCT
TGTCAAGCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTG
TTTGGCTGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCG
GCAGACATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGC
CGTTAAGCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATC
TGTTGCGAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAA
AAAATCGTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATC
AGGCGACGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGC
TGCTCTGGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGAT
CTTCGCGACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTC
TACACAACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACG
CTCCGAGCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACC
CTCGTGGTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAA
CCTCCCTGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGG
AGAACGATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGC
GAGAGGCTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTC
AAGCAGGCAACGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGG
GGAAGTCACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAG
GAGACAGAAACAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTAC
GGACGAGGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGG
ACGAAGAAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGACTCGTG
AGCTCACCCTCGAAGCAGCCCAGTCAGCAGCCCTGAGTAAGGGGTCTAGC
ACGGGTTTATCGTCTCGGAATTTGGCTACTGCTCACATCAAAAAGCTTCT
GGATAGTCGAAATGACCGGGAGGTCCTGGATGGCATGCGCCGGGTGATTA
CGATGGAGACCATTTCCAGGATATCCACGATGCTGGAAACAGTTGATGTA
CCGATCCGAACCTTCCCTCCCTTTCTTCTCGGCTGTGGTCAAAAACGTGG
CTAGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCCAT
CATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATCCA
AAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCGTA
CAATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGGCA
ATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCAGC
ATTGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCAGC
TGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCCTT
GGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGACCT
CATCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGACG
AGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGAAG
TGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGCTT
CTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCATG
AAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCAAG
CTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGGTG
TTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCCTC
TGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTATAT
AACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATACAC
TACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCTCA
AGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGAAG
GGTGTGATTCTCAGCGAACTGGAACACTTTTCACAGAGCGCAGACCCAGA
CCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGAGC
CTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGAGT
CTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTCAT
CCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAAGC
ATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGCTG
GTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGACAT
CCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAAGC
AGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGCGA
AACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATCGT
CAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGACG
AGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCTGG
CGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGCGA
CCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACAAC
TGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGAGC
CCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTGGT
TGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCCTG
AATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACGAT
ATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGGCT
CGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAGGC
AACGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGTCA
CTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACAGA
AACAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGAGG
AAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAGAA
GAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGACTCGTGAGCTCACC
CTCGAAGCAGCCCAGTCAGCAGCCCTGAGTAAGGGGTCTAGCACGGGTTT
ATCGTCTCGGAATTTGGCTACTGCTCACATCAAAAAGCTTCTGGATAGTC
GAAATGACCGGGAGGTCCTGGATGGCATGCGCCGGGTGATTACGATGGAG
ACCATTTCCAGGATATCCACGATGCTGGAAACAGTTGATGTACCGATCCG
AACCTTCCCTCCCTTTCTTCTCGGCTGTGGTCAAAAACGTGGCTAGTGCG
AACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCCATCATGCGGA
GGCGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATCCAAAAGTCCC
TTACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCGTACAATGTCG
GGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGGCAATCAAGAG
AGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCAGCATTGGCAA
TCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCAGCTGATTGGA
TATCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCCTTGGGCCTGC
TGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGACCTCATCCATA
AGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGACGAGTGGAGC
CAACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGAAGTGCTTCCC
TCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGCTTCTACGAGG
ACGATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCATGAAGTGCTT
GTGTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCAAGCTGTTGCT
GCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGGTGTTTCCTTT
ACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCCTCTGGTTGCG
CTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTATATAACATCGT
CGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATACACTACGCACT
TTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCTCAAGCTGGAA
GTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGAAGGGTGTGAT
TCTCAGCGAACTGGAACACTTTTCACAGAGCGCAGACCCAGACCTAGTGC
GAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGAGCCTCGAAGT
GCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGAGTCTTGACGA
CAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTCATCCAGCAGG
ACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAAGCATTTGGGA
TTAACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGCTGGTCGGAGA
ATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGACATCCTGCGCA
TTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAAGCAGCAGATC
ATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGCGAAACCCTCC
AAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATCGTCAACGAGT
GGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGACGAGAAACCG
CAGAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCTGGCGGTACCT
TCTTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGCGACCGAGCCC
GTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACAACTGGCCAAT
CTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGAGCCCGTCAGA
AACACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTGGTTGGTCCCG
ACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCCTGAATGGGTT
GAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACGATATCAAACC
AAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGGCTCGACCGAG
CCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAGGCAACGGGAT
GGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGTCACTCGACCA
GTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACAGAAACAGAGG
AAGAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGAGGAAACGGAC
GAAGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAGAAGAGCAGGG
ACAGAGTGCAGGACTCTTGAAGCCGTGACTCGTGAGCTCACCCTCGAAGC
AGCCCAGTCAGCAGCCCTGAGTAAGGGGTCTAGCACGGGTTTATCGTCTC
GGAATTTGGCTACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAATGAC
CGGGAGGTCCTGGATGGCATGCGCCGGGTGATTACGATGGAGACCATTTC
CAGGATATCCACGATGCTGGAAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030123 | AP-3 adaptor complex |
| GO:0030117 | membrane coat |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260VHV |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR026740 |
| DBxref | InterPro:IPR002553 |
| DBxref | PFAM:PF12717 |
| DBxref | PFAM:PF01602 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1083018..1085605 - |
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