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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1090826..1092398- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011047-T1 ID=CBS51388_011047-T1|Name=CBS51388_011047-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1573bp|location=Sequence derived from alignment at An18:1090826..1092398- (Aspergillus niger CBS 513.88)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGGTTAGTTCGCAGTTGAACAAGGCCTCTTCGCTTACAATATCTAACGCT
GCTATTAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATC
CCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAAT
GGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCG
TCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCC
GACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTT
ACGGCGGTTGATGATGGAGGTGCGTATAAACCCGCTTCTTATTTGAAACA
GATGAGCTCAGTCGGACCTAACACGGCATATGGAAACATAGTGTGGTGTC
AATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGT
TAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAA
CGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGC
ATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGA
AATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTAC
GACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAA
GAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACG
GCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAG
AAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAG
TCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAAT
CGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGT
TTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGAT
ATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAG
GAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGC
AGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATC
GAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCG
CATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTG
AAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAG
AAGAAGGTAAATGTCTCTTGTTTCCTTCGGCTTTGCATGCTTTACTAATT
TCCATCCAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAG
CGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCA
CGGACATGGAGAAATGCCTATAA back to topCoding sequence (CDS) from alignment at An18:1090826..1092398- >CBS51388_011047-T1 ID=CBS51388_011047-T1|Name=CBS51388_011047-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5568bp|location=Sequence derived from alignment at An18:1090826..1092398- (Aspergillus niger CBS 513.88)
ATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTCACGA
TGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGACATGG
AGAAATGCCTATAATGTGGTGTCAATGATTTTATGTTTACCGATCTCACC
AAGCCAACGCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTT
TGTCAGATTCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACA
AGGGCGAGAAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAG
GAGATGGAGCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGA
GGCACAGGTTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGC
TACTCGAATTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGA
GCCAAGGCGGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGA
AAAGGTCGTTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTA
TGGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAAT
CTCCTTCGTGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGC
TCTGCAAACATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAG
CTTGTGTGCGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGAT
GATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGG
GAATAATGTCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGC
TGGCACGATGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAA
AAAGCCGAAGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAA
ACAACTCCGGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGA
GAATCCGGATCGAACAAACTGAGAAGAAGCCGGACAAGGAAATCGCAGGA
TGCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCC
AAACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTA
TGAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGAC
GATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCT
CATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGATGGCGTACG
GCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGA
GGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGATGGCCGA
TCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACT
TGAAGTTGGAGTCACACATCAAACTCTATATCACGGACATGGAGAAATGC
CTATAATGTGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAAC
GCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGAT
TCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAG
AAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGA
GCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGG
TTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAA
TTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGC
GGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCG
TTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGC
CCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCG
TGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAA
CATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTG
CGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGA
GTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATG
TCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGA
TGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGA
AGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCC
GGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGG
ATCGAACAAACTGAGAAGAAGCCGGACAAGGAAATCGCAGGATGCATTAA
TGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGC
AACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATG
ACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTG
TGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCTCATGGGGT
TCTTTACCAGCTTACGGCGGTTGATGATGGAGATGGCGTACGGCAGCCGA
ATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAA
GAAGGAGGATGAGAATGATGCTCTTATGCGCCTGATGGCCGATCTCAAGG
AGAACATTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTG
GAGTCACACATCAAACTCTATATCACGGACATGGAGAAATGCCTATAATG
TGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATC
GACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAA
TCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAA
GTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCC
TCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAG
AAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACG
AAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGG
CAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACG
CGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTC
TCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAG
CGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCG
GACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCT
CGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGG
CCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAA
GTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGA
GAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGC
AGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAG
CGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACA
AACTGAGAAGAAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAG
GCATCCCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATT
CAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGA
AACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACT
ACCCCGACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACC
AGCTTACGGCGGTTGATGATGGAGATGGCGTACGGCAGCCGAATGAGCCA
GCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGAGG
ATGAGAATGATGCTCTTATGCGCCTGATGGCCGATCTCAAGGAGAACATT
GAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACA
CATCAAACTCTATATCACGGACATGGAGAAATGCCTATAATGTGGTGTCA
ATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTT
AAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAAC
GCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCA
TTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAA
ATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACG
ACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAG
AGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGG
CAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGA
AGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGT
CGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATC
GACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTT
TACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATA
TATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGG
AATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCA
GACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCG
AGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGC
ATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGA
AAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGA
AGAAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCC
TTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGT
CTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCG
AGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGAC
ATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACG
GCGGTTGATGATGGAGATGGCGTACGGCAGCCGAATGAGCCAGCAATTCC
ATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGAGGATGAGAAT
GATGCTCTTATGCGCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031262 | Ndc80 complex |
| GO:0000776 | kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041112 |
| DBxref | InterPro:IPR038275 |
| DBxref | InterPro:IPR005549 |
| DBxref | PFAM:PF03800 |
| DBxref | PFAM:PF18595 |
| Product | kinetochore-associated Ndc80 complex subunit nuf2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1090826..1092398 - |
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