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CBS51388_011060-T1, CBS51388_011060-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011060-T1
Unique NameCBS51388_011060-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1131735..1133303-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011060-T1 ID=CBS51388_011060-T1|Name=CBS51388_011060-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1569bp|location=Sequence derived from alignment at An18:1131735..1133303- (Aspergillus niger CBS 513.88)
ATGGGGTGAGTTAAGACAACGATCATCATCTGACAAAGGAAGGACATGGG
CTAACGGGTATCTTCTACAACAGTAAGGAGGACAAGACTCACATCAACAT
CGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACC
TGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAG
AAGGTAAGGAGGATTATACATCTGAAAGAAGAACATCAAGACATGGTGCT
AACAACATCCTACAGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA
CGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCA
TCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTC
ATTGGTAAGTACTATTACAGAGTTCTCTCGATCAAATCAACATACTAACG
TACACGATAGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCAC
TGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTG
GTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCT
CTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAA
GATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGG
AGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCT
TTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCC
CAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGG
TCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTC
CGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGAT
CTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTG
CCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTC
AAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGA
CAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTG
GTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGC
TTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGG
TTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCG
CTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCT
TCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCC
CTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTC
GTTTCGCTGTCCGCGATATGCGCCAGACTGTTGCTGTCGGTGTTATCAAG
GCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCA
GAAGGCCGGTAAGAAATAA
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Coding sequence (CDS) from alignment at An18:1131735..1133303-

>CBS51388_011060-T1 ID=CBS51388_011060-T1|Name=CBS51388_011060-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5532bp|location=Sequence derived from alignment at An18:1131735..1133303- (Aspergillus niger CBS 513.88)
ACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCC
CAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGA
GGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTT
TCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACC
TGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAA
CTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCA
TCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCC
TGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAA
GACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCA
ACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATT
GGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTAT
GGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTG
AGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGT
TTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGC
CGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCC
AGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCC
GTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCT
TGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGT
TCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCC
ATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGT
CCGCGATATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGA
AGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGT
AAGAAATAAGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTG
GGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACA
TTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGTA
AGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCC
GGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGA
CCAGCGTACCATCGAGAAGTTCGAGAAGATGGGACGCCCCCGGTCACCGT
GACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTAT
CCTCATCATTGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGG
ATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGT
CAGCTCATTGTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGA
CCGTTACAACGAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCG
GCTACAACCCCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGT
GACAACATGCTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGA
GAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCA
TCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTT
CCCCTCCAGGATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGG
TCGTGTCGAGACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTC
CCGCCAACGTCACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAG
CTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGT
TTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACG
ACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAAC
CACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACAC
TGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCC
GTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGAC
GCTGCCATCGTCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTT
CACTGACTACCCCCCTCTTGGTCGTTTCGCTGTCCGCGATATGCGCCAGA
CTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCC
GGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAGAAGCCGC
TGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCA
AGTCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTC
CAGACTGGCAAGTATGAGGTCACCGTCATTGTAAGGAGGACAAGACTCAC
ATCAACATCGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCAC
TGGTCACCTGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGA
AGTTCGAGAAGATGGGACGCCCCCGGTCACCGTGACTTCATCAAGAACAT
GATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCG
GTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAG
CACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCT
CAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCG
TTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGT
GTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCC
CTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCG
GCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCC
CCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTA
CAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTA
TCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACT
GAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCC
CGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTC
GCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGT
GAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGG
CGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCA
AGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTT
GAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGAT
GATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTC
TTGGTCGTTTCGCTGTCCGCGATATGCGCCAGACTGTTGCTGTCGGTGTT
ATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGC
CGCCCAGAAGGCCGGTAAGAAATAAGAAGCCGCTGAGCTCGGTAAGGGTT
CCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGT
GGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGA
GGTCACCGTCATTGTAAGGAGGACAAGACTCACATCAACATCGTCGTTAT
CGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACA
AGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAGAAGATGGGA
CGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCC
AGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGAG
GCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTT
CACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACCT
GCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAAC
TTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCAT
CTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCCT
GGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAG
ACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAA
CAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATTG
GAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTATG
GTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTGA
GATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTT
TCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCC
GGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCA
GGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCG
TCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTT
GAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTT
CATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCCA
TGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGTC
CGCGATATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAA
GAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTA
AGAAATAAGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGG
GTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACAT
TGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGTAA
GGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCCG
GCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGAC
CAGCGTACCATCGAGAAGTTCGAGAAGATGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TEF1CBS51388_011060Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011060-T1CBS51388_011060-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011060-T1.cdsCBS51388_011060-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011060-T1.exon4CBS51388_011060-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_011060-T1.exon3CBS51388_011060-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011060-T1.exon2CBS51388_011060-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011060-T1.exon1CBS51388_011060-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR004539
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation elongation factor EF-1 alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1131735..1133303 -
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