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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1155392..1156099- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011071-T1 ID=CBS51388_011071-T1|Name=CBS51388_011071-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=708bp|location=Sequence derived from alignment at An18:1155392..1156099- (Aspergillus niger CBS 513.88)
ATGAAAGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGTAA
GAAGGTACGACAACCGATTTCTTCATTTTCTGGCGAGGAGATACATATAT
ATATACCCCGAGGTGGAATGGATTGGAAGGAATGATTTTTTGCCGACTCG
AAGGAAATGAATTTTCGATTTGCATGGGAATAAAACAATCGAGCGGAAAC
GCGAATGATGGGCGAACTACCATGGGGGCAAAAGCGAACGGAATGTGCAA
GGATATATGTGCTGACGAGGGTTTCTTTTCGCGAATGACAGGTCGTCATT
GTCCAGCCTAACGACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCAT
CGTCGCCGGTATCGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTA
AGAAGACCGTCGAGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTC
AACTACAACCACTTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCT
TAAGGGTGCCGTCTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGG
ACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGC
AAGAACCGTTGGTTCTTCACTCCTCTGCGTACGTTTTGCCATCCATTGCT
TTTTGCCTACGTTGGCTGGATTAAGGTTCGCAATGCTGACGGTTCTACAG
GTTTCTAA back to topCoding sequence (CDS) from alignment at An18:1155392..1156099- >CBS51388_011071-T1 ID=CBS51388_011071-T1|Name=CBS51388_011071-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1197bp|location=Sequence derived from alignment at An18:1155392..1156099- (Aspergillus niger CBS 513.88)
GTTTCTAAGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGGCGCAC
CCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTCAAGGT
CACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCATCAAGC
CCTTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCTACACC
CTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTCAAGGA
GGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGG
ACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGCATGAA
AGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGG
TTTCTAAGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGGCGCACC
CCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTCAAGGTC
ACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCATCAAGCC
CTTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCTACACCC
TTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTCAAGGAG
GTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGGA
CCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGCATGAAA
GTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGGT
TTCTAAGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGGCGCACCC
CTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTCAAGGTCA
CCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCATCAAGCCC
TTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCTACACCCT
TGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTCAAGGAGG
TTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCTTGAGGAC
CGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGCATGAAAG
TGGGCCGTGTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008991 |
| DBxref | InterPro:IPR041991 |
| DBxref | InterPro:IPR018262 |
| DBxref | InterPro:IPR038655 |
| DBxref | InterPro:IPR001141 |
| DBxref | PFAM:PF01777 |
| Product | 60S ribosomal protein L27A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1155392..1156099 - |
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