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CBS51388_011076-T1, CBS51388_011076-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011076-T1
Unique NameCBS51388_011076-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1170504..1171965+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011076-T1 ID=CBS51388_011076-T1|Name=CBS51388_011076-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1462bp|location=Sequence derived from alignment at An18:1170504..1171965+ (Aspergillus niger CBS 513.88)
ATGGTAAGTATATCCAAAATGTTTCATCGTCTTCCAAATAGATGCTAATA
TACCTATCAGAAAATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGG
CTCCGGGAACCGCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAG
CATCCATTCGAACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAA
GCTAGAGCGCCTGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCC
ACGTGGACGGTGTGTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGG
TTCGCCAGTGGTAGTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCAC
TCAGGGAGAGGTGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTG
TCTGCTGGACCCCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACC
ATCAAGCTTTTCGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGC
AACCTACCTGGGCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACC
TGCCATACTTCGCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCC
CGTCCTTCCTCCACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGA
TACCATCACCTCCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTT
CGACCGGTATTGATCGCTCGATTATCATGTACGACCTTCGGACATCGTCC
CCTCTACATAAAATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAA
TCCGATGGAAGCATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCT
ACCTGTTCGATATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGAT
CACGTCGCCGCTGTGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATT
GGTCACTGCCTCTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGG
GCCACTCTCGCGACATCTACCACACCAAGCGTATGCAACGGTATGTATTT
CACTTTCGCTCTCCTTATCCAAGCAATTACAGTGCTGACTTCGTTCTACA
GTGTCTTCTCCGCCAAGTTTACCCCCGATAACAAGTACGTCTTGTCCGGC
TCCGACGATGGCAACATCCGACTTTGGCGCGCAAACGCATCCGACCGCAG
CGGTGTAAAGAGCGCTCGTCAACGGGCCAAGCTCGAGTACGACCAGGCCT
TGATCCAGAGATACTCGCACATGCCGGAAATCCGCCGAATCCGACGCCAG
CGTCACGTGCCGAAGCCGATCAAGAAGGCGCGCGAGATCAAGCGGGAGGA
GCTGATGGCGATCAAGAGACGCGAGGAGAACGTGCGCAAGCACACCAAGA
AGGAGAACCTGCCCAAGAGACAGAGCGAGCGCGAGAAGATGATCCTGGCC
AAGGAGCAATAG
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Coding sequence (CDS) from alignment at An18:1170504..1171965+

>CBS51388_011076-T1 ID=CBS51388_011076-T1|Name=CBS51388_011076-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4032bp|location=Sequence derived from alignment at An18:1170504..1171965+ (Aspergillus niger CBS 513.88)
ATGAAAATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGG
AACCGCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCAT
TCGAACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAG
CGCCTGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGA
CGGTGTGTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCA
GTGGTAGTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGA
GAGGTGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTG
GACCCCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGC
TTTTCGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTAC
CTGGGCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATA
CTTCGCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTT
CCTCCACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATC
ACCTCCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGG
TATTGATCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTAC
ATAAAATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATG
GAAGCATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTT
CGATATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCG
CCGCTGTGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACT
GCCTCTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTC
TCGCGACATCTACCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGT
TTACCCCCGATAACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACATC
CGACTTTGGCGCGCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCG
TCAACGGGCCAAGCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCGC
ACATGCCGGAAATCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCG
ATCAAGAAGGCGCGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAG
ACGCGAGGAGAACGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGA
GACAGAGCGAGCGCGAGAAGATGATCCTGGCCAAGGAGCAATAGATGAAA
ATCAAAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCGC
TGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAAC
GGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCTG
TTTGCTGCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGACGGTGT
GTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCAGTGGTA
GTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGAGAGGTG
TGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACCCC
CGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTTCG
ACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGGGC
CAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTCGC
CGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTCCA
CTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCTCC
ATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATTGA
TCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAAAA
TGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAGCA
TTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGATAT
GCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGCTG
TGATGGATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCTCT
TACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGCGA
CATCTACCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGTTTACCC
CCGATAACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACATCCGACTT
TGGCGCGCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAACG
GGCCAAGCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCGCACATGC
CGGAAATCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCGATCAAG
AAGGCGCGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGCGA
GGAGAACGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACAGA
GCGAGCGCGAGAAGATGATCCTGGCCAAGGAGCAATAGATGAAAATCAAA
GCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCGCTGTCGT
TCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAACGGGCTC
GTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCTGTTTGCT
GCGCCCTTCCTGGGCCAGATGGGCGACGGCCACGTGGACGGTGTGTATAC
CATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCAGTGGTAGTGGTG
ATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGAGAGGTGTGGAAC
ACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACCCCCGATCG
GAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTTCGACCCGT
ACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGGGCCAGGGC
GCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTCGCCGCCTC
TTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTCCACTCCGT
CCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCTCCATCGCT
TTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATTGATCGCTC
GATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAAAATGGTTC
TGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAGCATTCAAC
TTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGATATGCGCAA
GATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGCTGTGATGG
ATGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCTCTTACGAT
CGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGCGACATCTA
CCACACCAAGCGTATGCAACGTGTCTTCTCCGCCAAGTTTACCCCCGATA
ACAAGTACGTCTTGTCCGGCTCCGACGATGGCAACATCCGACTTTGGCGC
GCAAACGCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAACGGGCCAA
GCTCGAGTACGACCAGGCCTTGATCCAGAGATACTCGCACATGCCGGAAA
TCCGCCGAATCCGACGCCAGCGTCACGTGCCGAAGCCGATCAAGAAGGCG
CGCGAGATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGCGAGGAGAA
CGTGCGCAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACAGAGCGAGC
GCGAGAAGATGATCCTGGCCAAGGAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011076CBS51388_011076Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011076-T1.exon1CBS51388_011076-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011076-T1.exon2CBS51388_011076-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011076-T1.exon3CBS51388_011076-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011076-T1.cdsCBS51388_011076-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011076-T1CBS51388_011076-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR007287
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF04158
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1170504..1171965 +
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