|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1180023..1180992+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011081-T1 ID=CBS51388_011081-T1|Name=CBS51388_011081-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=970bp|location=Sequence derived from alignment at An18:1180023..1180992+ (Aspergillus niger CBS 513.88)
ATGTTCACCGGTCTCGTTGAGAAGATTGGGAGTGAGTCTCTAATCCTGCG
GCCATGACCACATAAACAGCAAAACTAATCACTCTCCTCTATCGCAGCGG
TCTCGTCCCTCGAGCCTCTCGATACCTCGTCAAGCGGGGGCGGGGGTACA
TCATTGACTATCACGGACTGTGAGGAGATCCTCACAGATTGCCATCTCGG
CGACAGTATAGCCGTCAATGGTATGAACTGCATTGCATGATACCAATTGA
CACACTCACATTCATTCCCATTGCACTTGATCCCTTTTTCCTCTGCTCTT
CCCTCGCCATCGTTGCCCCTCCCCCTTACCCCCACTCCCCCCCAAAATCT
CGAAACAATAACCCCCACCAAACCCCCCCGAAAAGAGAAATCCACCAAGC
CAACATAATCGCATCAAACCAGGAACCTGCCTTACAGTAACGGCCTTCGA
CAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAA
ATCTCGGCTCCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGCCGTC
CTGGGCGAAACGCGCATGGGCGGTCATCTCGTGCAGGGCCACGTCGACAC
CATCGCTAAGATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCC
GTATGCAGCCGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAAGGGA
TATGTTACGCTGGACGGGGCTAGTTTGACTGTGACGAATGTTGTGGATGG
CCAGGAGGGATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAGAAGA
TTGTCACGGCGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGATTGAT
ATTGTGGGCAAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTAC
TGCGGGTGGGGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATCGTGG
AGGAGAAGTTGAAAAGGTAG back to topCoding sequence (CDS) from alignment at An18:1180023..1180992+ >CBS51388_011081-T1 ID=CBS51388_011081-T1|Name=CBS51388_011081-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2061bp|location=Sequence derived from alignment at An18:1180023..1180992+ (Aspergillus niger CBS 513.88)
ATGTTCACCGGTCTCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAGCC
TCTCGATACCTCGTCAAGCGGGGGCGGGGGTACATCATTGACTATCACGG
ACTGTGAGGAGATCCTCACAGATTGCCATCTCGGCGACAGTATAGCCGTC
AATGTAACGGCCTTCGACAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGA
AACCCTCCGCCGCACAAATCTCGGCTCCCTGCAGACCAACTCCCGCGTGA
ACCTCGAACGCGCCGTCCTGGGCGAAACGCGCATGGGCGGTCATCTCGTG
CAGGGCCACGTCGACACCATCGCTAAGATCCTCTCCGTGACGCCGGAGGG
CAATGCGCTGGTGTTCCGTATGCAGCCGCGCGATATCGGCGTGATGCGGT
ATATCGTGGAGAAGGGATATGTTACGCTGGACGGGGCTAGTTTGACTGTG
ACGAATGTTGTGGATGGCCAGGAGGGATATTTTGAGGTGATGCTTATTGC
GTACACGCAGGAGAAGATTGTCACGGCGGCAAAGAAGCCCGGGGATTATG
TGAATGTGGAGATTGATATTGTGGGCAAATATGTTGAGAAGAGTGTGCAG
GGGTATTTTGCTGGTACTGCGGGTGGGGATATGAAGATGTTGGAGAAGAT
GGTAGAGAGGATCGTGGAGGAGAAGTTGAAAAGGTAGATGTTCACCGGTC
TCGTTGAGAAGATTGGGACGGTCTCGTCCCTCGAGCCTCTCGATACCTCG
TCAAGCGGGGGCGGGGGTACATCATTGACTATCACGGACTGTGAGGAGAT
CCTCACAGATTGCCATCTCGGCGACAGTATAGCCGTCAATGTAACGGCCT
TCGACAAAACCTGGTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGC
ACAAATCTCGGCTCCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGC
CGTCCTGGGCGAAACGCGCATGGGCGGTCATCTCGTGCAGGGCCACGTCG
ACACCATCGCTAAGATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTG
TTCCGTATGCAGCCGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAA
GGGATATGTTACGCTGGACGGGGCTAGTTTGACTGTGACGAATGTTGTGG
ATGGCCAGGAGGGATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAG
AAGATTGTCACGGCGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGAT
TGATATTGTGGGCAAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTG
GTACTGCGGGTGGGGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATC
GTGGAGGAGAAGTTGAAAAGGTAGATGTTCACCGGTCTCGTTGAGAAGAT
TGGGACGGTCTCGTCCCTCGAGCCTCTCGATACCTCGTCAAGCGGGGGCG
GGGGTACATCATTGACTATCACGGACTGTGAGGAGATCCTCACAGATTGC
CATCTCGGCGACAGTATAGCCGTCAATGTAACGGCCTTCGACAAAACCTG
GTTCAAGGTCGGCGTCGCCCCCGAAACCCTCCGCCGCACAAATCTCGGCT
CCCTGCAGACCAACTCCCGCGTGAACCTCGAACGCGCCGTCCTGGGCGAA
ACGCGCATGGGCGGTCATCTCGTGCAGGGCCACGTCGACACCATCGCTAA
GATCCTCTCCGTGACGCCGGAGGGCAATGCGCTGGTGTTCCGTATGCAGC
CGCGCGATATCGGCGTGATGCGGTATATCGTGGAGAAGGGATATGTTACG
CTGGACGGGGCTAGTTTGACTGTGACGAATGTTGTGGATGGCCAGGAGGG
ATATTTTGAGGTGATGCTTATTGCGTACACGCAGGAGAAGATTGTCACGG
CGGCAAAGAAGCCCGGGGATTATGTGAATGTGGAGATTGATATTGTGGGC
AAATATGTTGAGAAGAGTGTGCAGGGGTATTTTGCTGGTACTGCGGGTGG
GGATATGAAGATGTTGGAGAAGATGGTAGAGAGGATCGTGGAGGAGAAGT
TGAAAAGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017938 |
| DBxref | InterPro:IPR023366 |
| DBxref | InterPro:IPR001783 |
| DBxref | InterPro:IPR026017 |
| DBxref | PFAM:PF00677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1180023..1180992 + |
|
