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CBS51388_011089-T1, CBS51388_011089-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011089-T1
Unique NameCBS51388_011089-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1195734..1197278+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011089-T1 ID=CBS51388_011089-T1|Name=CBS51388_011089-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1545bp|location=Sequence derived from alignment at An18:1195734..1197278+ (Aspergillus niger CBS 513.88)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGTAAGCTCCGGTTGTCTTCCGTTCCGCCAG
CGCCTGTTCGACGCGGTGGCAATTGCGGCGTAAGCCGGGTCTTTTACTGA
CTGTCCGTCTGCTAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTATGTAATCGTGGATTTC
CCAGCCTAGCACGGGTCTTCTGACACACTTTCACAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Coding sequence (CDS) from alignment at An18:1195734..1197278+

>CBS51388_011089-T1 ID=CBS51388_011089-T1|Name=CBS51388_011089-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4185bp|location=Sequence derived from alignment at An18:1195734..1197278+ (Aspergillus niger CBS 513.88)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGT
CGAGCTTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGA
ACATTGACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACG
TCGACCCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGA
GAAGCTGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCG
TCCTGGATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAG
GTCGATGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAA
GCAAATCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTG
ACAGGTTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAATGTC
GACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAAGAAGA
AGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAGGAGAT
GCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGACTCTT
GGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCGACGGC
GGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGCGCCTG
ACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAAGAAAA
GATCGAGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTATGGGCC
GCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGAGACGA
ACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGTTCATC
GGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAGGAGAA
GGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTACGAAGC
GGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCATGCTT
GAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATCAAGGT
TCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCTCCGTT
CCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGGAGGCG
AGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGATGACCG
GGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGGTGCTC
AGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGAAGGGC
ATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAAGTACA
GGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAATGTCGACCT
TGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAAGAAGAAGGAC
CAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAGGAGATGCTGA
TATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGACTCTTGGACG
AGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCGACGGCGGATG
CTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGCGCCTGACTCA
CGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAAGAAAAGATCG
AGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTG
GATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCT
TGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCC
AGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAG
CCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATAC
GCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGA
AGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAG
GAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAA
GAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTATGGGCCGCCCG
GTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGAGACGAACGCC
ACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGTTCATCGGTGA
TGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAGGAGAAGGCAC
CTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTACGAAGCGGTTC
GACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCATGCTTGAACT
TCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATCAAGGTTCTCG
CGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCTCCGTTCCGGT
CGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGGAGGCGAGAGC
CAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGATGACCGGGTTA
ACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGGTGCTCAGCTG
AAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGAAGGGCATGAG
CAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAAGTACAGGCAA
AGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT5CBS51388_011089Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011089-T1.exon1CBS51388_011089-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011089-T1.exon2CBS51388_011089-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011089-T1.exon3CBS51388_011089-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011089-T1.cdsCBS51388_011089-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011089-T1CBS51388_011089-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF00004
Product26S proteasome regulatory subunit 6A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1195734..1197278 +
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