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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1234701..1236590- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011100-T1 ID=CBS51388_011100-T1|Name=CBS51388_011100-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1890bp|location=Sequence derived from alignment at An18:1234701..1236590- (Aspergillus niger CBS 513.88)
ATGTCCTCCCCAAAGAATTCTTCATCAGATCCCCCGGCAGGCCCGAGGGA
TAGCAAAGAGGGGCCTACCTCTACATATGCGCAATCCTACGCAGTATCAG
GCTCGTCCGAGGACACAGTTGATCAAGTGGATGGCCTGGCGCATATCCCT
ACGCGCGCCTCTCGGGCCTCGGTACCCTCTCTAGCCCAGAGAGTCACATC
TATAGGGACGACTGGCACCTCTGACCCGAACTATGAAGTCGACTGGGACG
ATGAGTTCGACACAAATAATCCGAAGAACTGGTCGTTTCCCTACAAAGCT
ATGGGAATCGCCATCCTATCATACAACACTTTGATTATGTGAGTCTGGCG
CATCGCCTAGATACGCATCATGCGATAACGACGCTAATCCCTTCCAGCGT
ATTATATTCAACATCGTACACCTCGGGAGAGTCGCAGATTGCAGCTGAAT
TCGGGACTTCCACCACCATCGTTACGTTGGGATTGACTTTGTACCTCATC
GGTCTGGCTGTGGGATCCATGTTTATGGCGCCATTGAGCGAATTGTACGG
CCGGAAGCCGGTCTGCATAGCCTGCTTGTTCATCTTCACGGTTTTGATCA
TACCTTGCGCGCTCGCCAAAAATCTTGCTACCCTGCTGGTTGTGCGCTTC
ATCGCAGCTTTGTTCGGAAGTGTAATGATCTCCACTGCGCCGGGAATGGT
TGCGGACATAGTGGAAGATGACCAGCGCGCGCTGGCAATGTCGGTCTGGA
GTCTTGGGCCCGTGAATGGCCCAGGTAAGCATAGCCGTCTCCCAGTCACA
ACCTACCTGTAACTAACTATGCCCTAGTTCTCGGGCCTATTATCGGCGGC
TTCGTCACCCAGTACCTGGGCTGGCGGTGGATGGATTGGATCGCTCTAAT
ATTGTCTGGGGTCGCGTTGGTCCTTTCATGTATCATGAAGGAGACCTATG
GCCCCATCATCCTGCAAAAGAAAGCCGCCCGCATGCGGAAAGAAACGGGC
GATTCACGATGGTGGTGTCGATACGAACAGAAGGCTAGCCTGAGTGAACT
ACTCAAGATAAACCTCGGCCGCCCGTTTGTCATGGCAGTCACTGAACCTA
TTTGGTTAGTCTTTCCGAACCCGTACTCATGCTGTCACCCCAAAGCTAAT
GCACTTGTTCATATAGTATATTTTGGAATATCTACATTGCCATCGTGTAT
GGCATCCTCTACCTGTGCTTCACAGCATACCCTATCGTTTTCCGGGATAT
TCGGGGTTGGTCACTTGGTCTCTCCGGTCTCGCATTCTTGGGTATCGGAA
CTGGATGTGTGATCACCATCTCCAGCGAACCTCTGATCCGCCGTCTGATC
AACAGCCATAAACCGGACCCCGAAACGGGAAAGCCACCCCCGGAGGCAAT
GGTGGCTTTCGTATGTATCTGCGCGCTCCTGATTCCAGCTGGAGAATTGT
GGTTCGCCTGGACCTGTTCGCCCGCCTCGATACCCTGGATTGTACCGATT
CTCGCAGGTGTACTCTTCGGTACAGGCAACACGGGCGTCTTTATCTACGC
GACCAACTACCTGGCTGGTAGTTACGGGGTGTATGCAGCGTCAGCGCTGG
CAGGGAATTCGGTGATCCGCAGTATCCTAGGTGGTGTCTTACCCCTTGTT
GGAACGTATATGTATGCCGGTATTGGTCCCAATTGGTCTGGGACGCTGTT
AGGCTTGCTCGAGGTGGCTATCGTTCCGATCCCATTCATTTTCTACAAGT
ATGGGTACAAAATCCGGGAGAAGAGCGTGCTCATCCGGCGGATGCAGGAG
GATAAGCAGCGATTGGCGGGAAAGCGCCAACGCCAAACACAGCAGGTGCC
AAATCTCGAGAAGACGGAGGAGGAGACGATGGAGGTGTAA back to topCoding sequence (CDS) from alignment at An18:1234701..1236590- >CBS51388_011100-T1 ID=CBS51388_011100-T1|Name=CBS51388_011100-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6864bp|location=Sequence derived from alignment at An18:1234701..1236590- (Aspergillus niger CBS 513.88)
TATATTTTGGAATATCTACATTGCCATCGTGTATGGCATCCTCTACCTGT
GCTTCACAGCATACCCTATCGTTTTCCGGGATATTCGGGGTTGGTCACTT
GGTCTCTCCGGTCTCGCATTCTTGGGTATCGGAACTGGATGTGTGATCAC
CATCTCCAGCGAACCTCTGATCCGCCGTCTGATCAACAGCCATAAACCGG
ACCCCGAAACGGGAAAGCCACCCCCGGAGGCAATGGTGGCTTTCGTATGT
ATCTGCGCGCTCCTGATTCCAGCTGGAGAATTGTGGTTCGCCTGGACCTG
TTCGCCCGCCTCGATACCCTGGATTGTACCGATTCTCGCAGGTGTACTCT
TCGGTACAGGCAACACGGGCGTCTTTATCTACGCGACCAACTACCTGGCT
GGTAGTTACGGGGTGTATGCAGCGTCAGCGCTGGCAGGGAATTCGGTGAT
CCGCAGTATCCTAGGTGGTGTCTTACCCCTTGTTGGAACGTATATGTATG
CCGGTATTGGTCCCAATTGGTCTGGGACGCTGTTAGGCTTGCTCGAGGTG
GCTATCGTTCCGATCCCATTCATTTTCTACAAGTATGGGTACAAAATCCG
GGAGAAGAGCGTGCTCATCCGGCGGATGCAGGAGGATAAGCAGCGATTGG
CGGGAAAGCGCCAACGCCAAACACAGCAGGTGCCAAATCTCGAGAAGACG
GAGGAGGAGACGATGGAGGTGTAATTCTCGGGCCTATTATCGGCGGCTTC
GTCACCCAGTACCTGGGCTGGCGGTGGATGGATTGGATCGCTCTAATATT
GTCTGGGGTCGCGTTGGTCCTTTCATGTATCATGAAGGAGACCTATGGCC
CCATCATCCTGCAAAAGAAAGCCGCCCGCATGCGGAAAGAAACGGGCGAT
TCACGATGGTGGTGTCGATACGAACAGAAGGCTAGCCTGAGTGAACTACT
CAAGATAAACCTCGGCCGCCCGTTTGTCATGGCAGTCACTGAACCTATTT
GCGTATTATATTCAACATCGTACACCTCGGGAGAGTCGCAGATTGCAGCT
GAATTCGGGACTTCCACCACCATCGTTACGTTGGGATTGACTTTGTACCT
CATCGGTCTGGCTGTGGGATCCATGTTTATGGCGCCATTGAGCGAATTGT
ACGGCCGGAAGCCGGTCTGCATAGCCTGCTTGTTCATCTTCACGGTTTTG
ATCATACCTTGCGCGCTCGCCAAAAATCTTGCTACCCTGCTGGTTGTGCG
CTTCATCGCAGCTTTGTTCGGAAGTGTAATGATCTCCACTGCGCCGGGAA
TGGTTGCGGACATAGTGGAAGATGACCAGCGCGCGCTGGCAATGTCGGTC
TGGAGTCTTGGGCCCGTGAATGGCCCAGATGTCCTCCCCAAAGAATTCTT
CATCAGATCCCCCGGCAGGCCCGAGGGATAGCAAAGAGGGGCCTACCTCT
ACATATGCGCAATCCTACGCAGTATCAGGCTCGTCCGAGGACACAGTTGA
TCAAGTGGATGGCCTGGCGCATATCCCTACGCGCGCCTCTCGGGCCTCGG
TACCCTCTCTAGCCCAGAGAGTCACATCTATAGGGACGACTGGCACCTCT
GACCCGAACTATGAAGTCGACTGGGACGATGAGTTCGACACAAATAATCC
GAAGAACTGGTCGTTTCCCTACAAAGCTATGGGAATCGCCATCCTATCAT
ACAACACTTTGATTATTATATTTTGGAATATCTACATTGCCATCGTGTAT
GGCATCCTCTACCTGTGCTTCACAGCATACCCTATCGTTTTCCGGGATAT
TCGGGGTTGGTCACTTGGTCTCTCCGGTCTCGCATTCTTGGGTATCGGAA
CTGGATGTGTGATCACCATCTCCAGCGAACCTCTGATCCGCCGTCTGATC
AACAGCCATAAACCGGACCCCGAAACGGGAAAGCCACCCCCGGAGGCAAT
GGTGGCTTTCGTATGTATCTGCGCGCTCCTGATTCCAGCTGGAGAATTGT
GGTTCGCCTGGACCTGTTCGCCCGCCTCGATACCCTGGATTGTACCGATT
CTCGCAGGTGTACTCTTCGGTACAGGCAACACGGGCGTCTTTATCTACGC
GACCAACTACCTGGCTGGTAGTTACGGGGTGTATGCAGCGTCAGCGCTGG
CAGGGAATTCGGTGATCCGCAGTATCCTAGGTGGTGTCTTACCCCTTGTT
GGAACGTATATGTATGCCGGTATTGGTCCCAATTGGTCTGGGACGCTGTT
AGGCTTGCTCGAGGTGGCTATCGTTCCGATCCCATTCATTTTCTACAAGT
ATGGGTACAAAATCCGGGAGAAGAGCGTGCTCATCCGGCGGATGCAGGAG
GATAAGCAGCGATTGGCGGGAAAGCGCCAACGCCAAACACAGCAGGTGCC
AAATCTCGAGAAGACGGAGGAGGAGACGATGGAGGTGTAATTCTCGGGCC
TATTATCGGCGGCTTCGTCACCCAGTACCTGGGCTGGCGGTGGATGGATT
GGATCGCTCTAATATTGTCTGGGGTCGCGTTGGTCCTTTCATGTATCATG
AAGGAGACCTATGGCCCCATCATCCTGCAAAAGAAAGCCGCCCGCATGCG
GAAAGAAACGGGCGATTCACGATGGTGGTGTCGATACGAACAGAAGGCTA
GCCTGAGTGAACTACTCAAGATAAACCTCGGCCGCCCGTTTGTCATGGCA
GTCACTGAACCTATTTGCGTATTATATTCAACATCGTACACCTCGGGAGA
GTCGCAGATTGCAGCTGAATTCGGGACTTCCACCACCATCGTTACGTTGG
GATTGACTTTGTACCTCATCGGTCTGGCTGTGGGATCCATGTTTATGGCG
CCATTGAGCGAATTGTACGGCCGGAAGCCGGTCTGCATAGCCTGCTTGTT
CATCTTCACGGTTTTGATCATACCTTGCGCGCTCGCCAAAAATCTTGCTA
CCCTGCTGGTTGTGCGCTTCATCGCAGCTTTGTTCGGAAGTGTAATGATC
TCCACTGCGCCGGGAATGGTTGCGGACATAGTGGAAGATGACCAGCGCGC
GCTGGCAATGTCGGTCTGGAGTCTTGGGCCCGTGAATGGCCCAGATGTCC
TCCCCAAAGAATTCTTCATCAGATCCCCCGGCAGGCCCGAGGGATAGCAA
AGAGGGGCCTACCTCTACATATGCGCAATCCTACGCAGTATCAGGCTCGT
CCGAGGACACAGTTGATCAAGTGGATGGCCTGGCGCATATCCCTACGCGC
GCCTCTCGGGCCTCGGTACCCTCTCTAGCCCAGAGAGTCACATCTATAGG
GACGACTGGCACCTCTGACCCGAACTATGAAGTCGACTGGGACGATGAGT
TCGACACAAATAATCCGAAGAACTGGTCGTTTCCCTACAAAGCTATGGGA
ATCGCCATCCTATCATACAACACTTTGATTATTATATTTTGGAATATCTA
CATTGCCATCGTGTATGGCATCCTCTACCTGTGCTTCACAGCATACCCTA
TCGTTTTCCGGGATATTCGGGGTTGGTCACTTGGTCTCTCCGGTCTCGCA
TTCTTGGGTATCGGAACTGGATGTGTGATCACCATCTCCAGCGAACCTCT
GATCCGCCGTCTGATCAACAGCCATAAACCGGACCCCGAAACGGGAAAGC
CACCCCCGGAGGCAATGGTGGCTTTCGTATGTATCTGCGCGCTCCTGATT
CCAGCTGGAGAATTGTGGTTCGCCTGGACCTGTTCGCCCGCCTCGATACC
CTGGATTGTACCGATTCTCGCAGGTGTACTCTTCGGTACAGGCAACACGG
GCGTCTTTATCTACGCGACCAACTACCTGGCTGGTAGTTACGGGGTGTAT
GCAGCGTCAGCGCTGGCAGGGAATTCGGTGATCCGCAGTATCCTAGGTGG
TGTCTTACCCCTTGTTGGAACGTATATGTATGCCGGTATTGGTCCCAATT
GGTCTGGGACGCTGTTAGGCTTGCTCGAGGTGGCTATCGTTCCGATCCCA
TTCATTTTCTACAAGTATGGGTACAAAATCCGGGAGAAGAGCGTGCTCAT
CCGGCGGATGCAGGAGGATAAGCAGCGATTGGCGGGAAAGCGCCAACGCC
AAACACAGCAGGTGCCAAATCTCGAGAAGACGGAGGAGGAGACGATGGAG
GTGTAATTCTCGGGCCTATTATCGGCGGCTTCGTCACCCAGTACCTGGGC
TGGCGGTGGATGGATTGGATCGCTCTAATATTGTCTGGGGTCGCGTTGGT
CCTTTCATGTATCATGAAGGAGACCTATGGCCCCATCATCCTGCAAAAGA
AAGCCGCCCGCATGCGGAAAGAAACGGGCGATTCACGATGGTGGTGTCGA
TACGAACAGAAGGCTAGCCTGAGTGAACTACTCAAGATAAACCTCGGCCG
CCCGTTTGTCATGGCAGTCACTGAACCTATTTGCGTATTATATTCAACAT
CGTACACCTCGGGAGAGTCGCAGATTGCAGCTGAATTCGGGACTTCCACC
ACCATCGTTACGTTGGGATTGACTTTGTACCTCATCGGTCTGGCTGTGGG
ATCCATGTTTATGGCGCCATTGAGCGAATTGTACGGCCGGAAGCCGGTCT
GCATAGCCTGCTTGTTCATCTTCACGGTTTTGATCATACCTTGCGCGCTC
GCCAAAAATCTTGCTACCCTGCTGGTTGTGCGCTTCATCGCAGCTTTGTT
CGGAAGTGTAATGATCTCCACTGCGCCGGGAATGGTTGCGGACATAGTGG
AAGATGACCAGCGCGCGCTGGCAATGTCGGTCTGGAGTCTTGGGCCCGTG
AATGGCCCAGATGTCCTCCCCAAAGAATTCTTCATCAGATCCCCCGGCAG
GCCCGAGGGATAGCAAAGAGGGGCCTACCTCTACATATGCGCAATCCTAC
GCAGTATCAGGCTCGTCCGAGGACACAGTTGATCAAGTGGATGGCCTGGC
GCATATCCCTACGCGCGCCTCTCGGGCCTCGGTACCCTCTCTAGCCCAGA
GAGTCACATCTATAGGGACGACTGGCACCTCTGACCCGAACTATGAAGTC
GACTGGGACGATGAGTTCGACACAAATAATCCGAAGAACTGGTCGTTTCC
CTACAAAGCTATGGGAATCGCCATCCTATCATACAACACTTTGATTATTA
TATTTTGGAATATCTACATTGCCATCGTGTATGGCATCCTCTACCTGTGC
TTCACAGCATACCCTATCGTTTTCCGGGATATTCGGGGTTGGTCACTTGG
TCTCTCCGGTCTCGCATTCTTGGGTATCGGAACTGGATGTGTGATCACCA
TCTCCAGCGAACCTCTGATCCGCCGTCTGATCAACAGCCATAAACCGGAC
CCCGAAACGGGAAAGCCACCCCCGGAGGCAATGGTGGCTTTCGTATGTAT
CTGCGCGCTCCTGATTCCAGCTGGAGAATTGTGGTTCGCCTGGACCTGTT
CGCCCGCCTCGATACCCTGGATTGTACCGATTCTCGCAGGTGTACTCTTC
GGTACAGGCAACACGGGCGTCTTTATCTACGCGACCAACTACCTGGCTGG
TAGTTACGGGGTGTATGCAGCGTCAGCGCTGGCAGGGAATTCGGTGATCC
GCAGTATCCTAGGTGGTGTCTTACCCCTTGTTGGAACGTATATGTATGCC
GGTATTGGTCCCAATTGGTCTGGGACGCTGTTAGGCTTGCTCGAGGTGGC
TATCGTTCCGATCCCATTCATTTTCTACAAGTATGGGTACAAAATCCGGG
AGAAGAGCGTGCTCATCCGGCGGATGCAGGAGGATAAGCAGCGATTGGCG
GGAAAGCGCCAACGCCAAACACAGCAGGTGCCAAATCTCGAGAAGACGGA
GGAGGAGACGATGGAGGTGTAATTCTCGGGCCTATTATCGGCGGCTTCGT
CACCCAGTACCTGGGCTGGCGGTGGATGGATTGGATCGCTCTAATATTGT
CTGGGGTCGCGTTGGTCCTTTCATGTATCATGAAGGAGACCTATGGCCCC
ATCATCCTGCAAAAGAAAGCCGCCCGCATGCGGAAAGAAACGGGCGATTC
ACGATGGTGGTGTCGATACGAACAGAAGGCTAGCCTGAGTGAACTACTCA
AGATAAACCTCGGCCGCCCGTTTGTCATGGCAGTCACTGAACCTATTTGC
GTATTATATTCAACATCGTACACCTCGGGAGAGTCGCAGATTGCAGCTGA
ATTCGGGACTTCCACCACCATCGTTACGTTGGGATTGACTTTGTACCTCA
TCGGTCTGGCTGTGGGATCCATGTTTATGGCGCCATTGAGCGAATTGTAC
GGCCGGAAGCCGGTCTGCATAGCCTGCTTGTTCATCTTCACGGTTTTGAT
CATACCTTGCGCGCTCGCCAAAAATCTTGCTACCCTGCTGGTTGTGCGCT
TCATCGCAGCTTTGTTCGGAAGTGTAATGATCTCCACTGCGCCGGGAATG
GTTGCGGACATAGTGGAAGATGACCAGCGCGCGCTGGCAATGTCGGTCTG
GAGTCTTGGGCCCGTGAATGGCCCAGATGTCCTCCCCAAAGAATTCTTCA
TCAGATCCCCCGGCAGGCCCGAGGGATAGCAAAGAGGGGCCTACCTCTAC
ATATGCGCAATCCTACGCAGTATCAGGCTCGTCCGAGGACACAGTTGATC
AAGTGGATGGCCTGGCGCATATCCCTACGCGCGCCTCTCGGGCCTCGGTA
CCCTCTCTAGCCCAGAGAGTCACATCTATAGGGACGACTGGCACCTCTGA
CCCGAACTATGAAGTCGACTGGGACGATGAGTTCGACACAAATAATCCGA
AGAACTGGTCGTTTCCCTACAAAGCTATGGGAATCGCCATCCTATCATAC
AACACTTTGATTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1234701..1236590 - |
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