You are here

Home

CBS51388_011107-T1, CBS51388_011107-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011107-T1
Unique NameCBS51388_011107-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1257059..1258009-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011107-T1 ID=CBS51388_011107-T1|Name=CBS51388_011107-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=951bp|location=Sequence derived from alignment at An18:1257059..1258009- (Aspergillus niger CBS 513.88)
ATGCTTCACCGCCCGCTTATCGATAAGGTCTTGGCGGACATGACGATGTT
GAGGCCGTGCTCGGGTGTGTTTGTGCCTGGTCCGCATCGCTCTCCAACTC
ACACTTTCGCTCTTTCTCTTCTTTGATTCGTACCCCTTTTCTATCAGTCT
CCTTCTGGCGTTATCATCTTCTTTTGTTTGTTTGATCATGCCACACAGAC
ATATCGATACTACTAAAGCAGCGTGGCTATATCCCCTGCGGGTATGTTTG
GCCTCGTTGCTGCCTGTTCACTTTCGTGCGGTGAAACTGATTGTTTGGTG
ATTCTACAGGGCATCTATTATTTTGCGTCGCACCGCTACCTTTGGCCTCT
TTTCAAGACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATCTACG
TCCTGCTCTTCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATC
TTCCAGGGTGTCGGGGCCTGGATCAATGGCGCGTTCCTGGTACTAGGGGA
GGGGGCGGCGATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGA
CCCTCGTGGACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAA
CTCGTCACCATGTCGAGGGTTTTGTACCCCCAGGGCGATGATGTCGTCAA
ACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGC
GGCAAATCGTGGAATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTG
GCCGGAACACCCATGTTCCTCGTGCTGACCGGCTACCGGGCGGGCCCCTT
CCACCATTGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCA
AAGAAAGGATCCGCCGCAGACAATTGCAATATACCACGTGGGTTTCAACC
TTCTTTCCCCTGACACAACCCCCTTTGAAGGTCTACCGAGGTTCATACTA
A
back to top

Coding sequence (CDS) from alignment at An18:1257059..1258009-

>CBS51388_011107-T1 ID=CBS51388_011107-T1|Name=CBS51388_011107-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2178bp|location=Sequence derived from alignment at An18:1257059..1258009- (Aspergillus niger CBS 513.88)
GGCATCTATTATTTTGCGTCGCACCGCTACCTTTGGCCTCTTTTCAAGAC
TCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATCTACGTCCTGCTCT
TCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGGGT
GTCGGGGCCTGGATCAATGGCGCGTTCCTGGTACTAGGGGAGGGGGCGGC
GATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGACCCTCGTGG
ACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCACC
ATGTCGAGGGTTTTGTACCCCCAGGGCGATGATGTCGTCAAACGGCTCGG
CAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAAATCG
TGGAATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAACA
CCCATGTTCCTCGTGCTGACCGGCTACCGGGCGGGCCCCTTCCACCATTG
GCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAAAGGA
TCCGCCGCAGACAATTGCAATATACCACGTGGGTTTCAACCTTCTTTCCC
CTGACACAACCCCCTTTGAAGGTCTACCGAGGTTCATACTAACGTGGCTA
TATCCCCTGCGGATGCTTCACCGCCCGCTTATCGATAAGGTCTTGGCGGA
CATGACGATGTTGAGGCCGTGCTCGGGGCATCTATTATTTTGCGTCGCAC
CGCTACCTTTGGCCTCTTTTCAAGACTCGTCTGATTCCGATCGTCCTCCT
GTCCGCTTTCATCTACGTCCTGCTCTTCCTATTTGCATATTTGCCCCAAG
TGGCCTTCCTGTCCATCTTCCAGGGTGTCGGGGCCTGGATCAATGGCGCG
TTCCTGGTACTAGGGGAGGGGGCGGCGATTGTTGCTGCTCTTTTTGAAGC
CTTCTTTGTCGATGAGACCCTCGTGGACATTTTCGACTCGGTGCTCGTGA
GTGAGGGCCATGGCGAACTCGTCACCATGTCGAGGGTTTTGTACCCCCAG
GGCGATGATGTCGTCAAACGGCTCGGCAAGCCCACCAAGAGCGCCGTTTA
TGCACCGTTCTCACTGCGGCAAATCGTGGAATTCATTGTGCTTCTACCGC
TGAACTTTATCCCGGTGGCCGGAACACCCATGTTCCTCGTGCTGACCGGC
TACCGGGCGGGCCCCTTCCACCATTGGCGATACTTTCAGTTGTTGGATCT
TTCGAAACAACAGCGCAAAGAAAGGATCCGCCGCAGACAATTGCAATATA
CCACGTGGGTTTCAACCTTCTTTCCCCTGACACAACCCCCTTTGAAGGTC
TACCGAGGTTCATACTAACGTGGCTATATCCCCTGCGGATGCTTCACCGC
CCGCTTATCGATAAGGTCTTGGCGGACATGACGATGTTGAGGCCGTGCTC
GGGGCATCTATTATTTTGCGTCGCACCGCTACCTTTGGCCTCTTTTCAAG
ACTCGTCTGATTCCGATCGTCCTCCTGTCCGCTTTCATCTACGTCCTGCT
CTTCCTATTTGCATATTTGCCCCAAGTGGCCTTCCTGTCCATCTTCCAGG
GTGTCGGGGCCTGGATCAATGGCGCGTTCCTGGTACTAGGGGAGGGGGCG
GCGATTGTTGCTGCTCTTTTTGAAGCCTTCTTTGTCGATGAGACCCTCGT
GGACATTTTCGACTCGGTGCTCGTGAGTGAGGGCCATGGCGAACTCGTCA
CCATGTCGAGGGTTTTGTACCCCCAGGGCGATGATGTCGTCAAACGGCTC
GGCAAGCCCACCAAGAGCGCCGTTTATGCACCGTTCTCACTGCGGCAAAT
CGTGGAATTCATTGTGCTTCTACCGCTGAACTTTATCCCGGTGGCCGGAA
CACCCATGTTCCTCGTGCTGACCGGCTACCGGGCGGGCCCCTTCCACCAT
TGGCGATACTTTCAGTTGTTGGATCTTTCGAAACAACAGCGCAAAGAAAG
GATCCGCCGCAGACAATTGCAATATACCACGTGGGTTTCAACCTTCTTTC
CCCTGACACAACCCCCTTTGAAGGTCTACCGAGGTTCATACTAACGTGGC
TATATCCCCTGCGGATGCTTCACCGCCCGCTTATCGATAAGGTCTTGGCG
GACATGACGATGTTGAGGCCGTGCTCGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011107CBS51388_011107Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011107-T1CBS51388_011107-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011107-T1.cdsCBS51388_011107-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011107-T1.exon3CBS51388_011107-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011107-T1.exon2CBS51388_011107-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011107-T1.exon1CBS51388_011107-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefPFAM:PF07264
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1257059..1258009 -
Powered by Drupal