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CBS51388_011115-T1, CBS51388_011115-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011115-T1
Unique NameCBS51388_011115-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1272100..1274643+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011115-T1 ID=CBS51388_011115-T1|Name=CBS51388_011115-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2544bp|location=Sequence derived from alignment at An18:1272100..1274643+ (Aspergillus niger CBS 513.88)
ATGCCTCAAAAAGAATTCGTCCCCAAGACTTATCAGGAGTCTTCAACTGG
GGCTCAAAGCTCCTCCTCTGTACATCTTCGCTCAAGTCCCGAAGAGCGAT
CCTTCGACTTCTCCTTTGAACCAATTCGTGAGAACCTATTCAGAGTTACC
TTCTCTTCTCAAGATCACCCTCTCCCTCCATACCCCAGTGTGACCAAGCC
GGCAACAAGTCTCGATGGCGTCCATGTCTCCGCAACAGGCGGCTCGAACC
AAAAGACAATCGAAGTTGGCGATGTAACAGCGTCCGTTGAGTGGAGTAAC
ACGCCGGTCGTCTCACTATCGTGGAAGGGCACAGAGAAGCCCTTATATCG
CGATCTGCCTCTTCGCTCCTATGTCGCAGACTCTACTGGTATTGCACACT
ACACCGAGCATGACCGGGATTGTCTTCACGTTGGACTTGGCGAGAAGAGA
GCTCCCATGGACCTCACGGGACGCCATTTCCAGCTCTCAGCCACAGACAG
CTTCGGTTACGATGTTTACAACACCGACCCTCTATACAAGCACATTCCTC
TGCTGATTAAGGCATCGCCTGATGGTTGCGTGGCCATCTTCTCCACGACA
CATGGCAGAGGAACCTGGTCCGTCGGCTCGGAGGTCGATGGTCTCTGGGG
CCACTTCAAAGTCTACCGTCAAGACTATGGTGGACTGGAGCAATACCTCA
TCGTCGGCAAGACGCTCAAGGATGTTGTGCGCTCCTATGCAGAGCTTGTC
GGTCTTCCGATCCTCGTCCCCAGATGGGCATATGGATACATCTCAGGCGG
ATACAAGTACACCATGCTTGACGACCCGCCTGCTCACGAGGCATTGATGG
AGTTCGCAGACAAGCTGGAAGAGCACGGCATTCCCTGCTCCGCACACCAA
ATGAGCTCGGGATACTCAATCGCGGAGACCGAGCCTAAAGTCCGCAACGT
CTTCACATGGAACAAATACCGATTCCCCAACCCCGAAGAGTGGATTGCCA
AGTACCATGGTCGGGGAATCCGCCTCCTCTCCAACATTAAGCCGTTCCTG
CTCGCCTCACACCCTGACTTCCAGAAGCTCATCGATGGGAACGGATTCTT
CAAGGATCCTGAGAGCAGCAAGCCCGGCTACATGCGACTGTGGAGTGCTG
GAGGCGCAACAGGAGGCGATGGATGCCACATCGACTTTTCATCCGCTGTT
GCGTTCAAGTGGTGGTATGATGGCGTGCAGAGCCTGAAGCGCGCCGGAAT
TGACGCCATGTGGAACGACAACAACGAATACACACTCCCCGATGATGACT
GGAAGTTGGCATTGGACGAGCCAACCGTCTCCGACGCCGTCAAGAAGGGC
GTCGAGAACTCTGTCGGACAATGGGGTCGCGCCATGCACACCGAACTCAT
GGGCAAAGCCTCCCATGACGCTCTTCTCAACATCGAGCCCAACCACAGAC
CATTCGTCTTGACTCGCAGTGCCACTGCAGGTACAATGCGCTACGCTGCC
AGCACCTGGAGCGGAGACAACGTTACTAGCTGGGAGGGCATGAAGGGAGC
GAATGCTCTGTCCCTCAGCGCAGGTATCTCTCTTCTACAGTGCTGCGGTC
ACGATATCGGAGGATTCGAGGGACCTCAGCCCTCTCCTGAGCTGCTGCTC
AGATGGATTCAACTGGGTATTCACTCGCCTCGTTTTGCCATCAACTGCTT
CAAGACGTCTCCTGGGAACAGCTCCGTCGGAGACGTTATCGAGCCGTGGA
TGTACCCCGAGATCACCCCTCTCGTTCGGGATACAATCAAGCGTCGTTAC
GAGATCCTCCCCTATATCTACTCTCTCGGTCTGGAAAGCCATCTGACCGC
ATCCCCGCCCCAGCGCTGGGTAGGATGGGGCTACGAATCTGACCCGGAGG
TATGGACCAAGGCCCTGAAGTCCGGCGATGAGCAGTTCTGGTTCGGTGAC
ACCATCATGGTCGGCGGTGTCTACGAGCCAGGTGTGAGCGTTGCCAAGTT
ATACCTTCCCCGTAAGGCGAATGACCAGTTCGACTTCGGGTACGTGAACA
TGAACGAGCCTTATAACTACCTCGCCTCCGGACAATGGGTGGAAGTGCCC
TCCGAATGGAGGAAGAGCATTCCCCTTCTGGCCAGAATCGGCGGTGCTAT
CCCCGTCGGAAAACCCGTTCATACCAGGGTACCTGGCGATGATACCCCGG
CTTCTGTGGCTGTGAAAGAAGTCGATGATTACCGTGGAGTCGAAATCTTC
CCGCCTCTTGGCAGTTCTCATGGCCAGGTTTTCAGTACTACTTGGTTTGA
AGACGATGGTATTTCGCTTGAGGCTCGCATCTCGGAGTACACTGTCACCT
ATAGCTCCACGGAGGAGAAGGTCATTGTTGGATTTTCTCGTGATGAGAAG
TCTGGATTCGTCCCTGCTTGGACAGACCTTGATATAATCCTTCATAATGG
TGATGAGAGACGCGTTGTGTCGGATATTGGAAAGACTGTGGAGTATAAGG
GTAAGGGCTCCCGGGGACGGGTGGTTTATACCTTGAAGAACTAG
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Coding sequence (CDS) from alignment at An18:1272100..1274643+

>CBS51388_011115-T1 ID=CBS51388_011115-T1|Name=CBS51388_011115-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2544bp|location=Sequence derived from alignment at An18:1272100..1274643+ (Aspergillus niger CBS 513.88)
ATGCCTCAAAAAGAATTCGTCCCCAAGACTTATCAGGAGTCTTCAACTGG
GGCTCAAAGCTCCTCCTCTGTACATCTTCGCTCAAGTCCCGAAGAGCGAT
CCTTCGACTTCTCCTTTGAACCAATTCGTGAGAACCTATTCAGAGTTACC
TTCTCTTCTCAAGATCACCCTCTCCCTCCATACCCCAGTGTGACCAAGCC
GGCAACAAGTCTCGATGGCGTCCATGTCTCCGCAACAGGCGGCTCGAACC
AAAAGACAATCGAAGTTGGCGATGTAACAGCGTCCGTTGAGTGGAGTAAC
ACGCCGGTCGTCTCACTATCGTGGAAGGGCACAGAGAAGCCCTTATATCG
CGATCTGCCTCTTCGCTCCTATGTCGCAGACTCTACTGGTATTGCACACT
ACACCGAGCATGACCGGGATTGTCTTCACGTTGGACTTGGCGAGAAGAGA
GCTCCCATGGACCTCACGGGACGCCATTTCCAGCTCTCAGCCACAGACAG
CTTCGGTTACGATGTTTACAACACCGACCCTCTATACAAGCACATTCCTC
TGCTGATTAAGGCATCGCCTGATGGTTGCGTGGCCATCTTCTCCACGACA
CATGGCAGAGGAACCTGGTCCGTCGGCTCGGAGGTCGATGGTCTCTGGGG
CCACTTCAAAGTCTACCGTCAAGACTATGGTGGACTGGAGCAATACCTCA
TCGTCGGCAAGACGCTCAAGGATGTTGTGCGCTCCTATGCAGAGCTTGTC
GGTCTTCCGATCCTCGTCCCCAGATGGGCATATGGATACATCTCAGGCGG
ATACAAGTACACCATGCTTGACGACCCGCCTGCTCACGAGGCATTGATGG
AGTTCGCAGACAAGCTGGAAGAGCACGGCATTCCCTGCTCCGCACACCAA
ATGAGCTCGGGATACTCAATCGCGGAGACCGAGCCTAAAGTCCGCAACGT
CTTCACATGGAACAAATACCGATTCCCCAACCCCGAAGAGTGGATTGCCA
AGTACCATGGTCGGGGAATCCGCCTCCTCTCCAACATTAAGCCGTTCCTG
CTCGCCTCACACCCTGACTTCCAGAAGCTCATCGATGGGAACGGATTCTT
CAAGGATCCTGAGAGCAGCAAGCCCGGCTACATGCGACTGTGGAGTGCTG
GAGGCGCAACAGGAGGCGATGGATGCCACATCGACTTTTCATCCGCTGTT
GCGTTCAAGTGGTGGTATGATGGCGTGCAGAGCCTGAAGCGCGCCGGAAT
TGACGCCATGTGGAACGACAACAACGAATACACACTCCCCGATGATGACT
GGAAGTTGGCATTGGACGAGCCAACCGTCTCCGACGCCGTCAAGAAGGGC
GTCGAGAACTCTGTCGGACAATGGGGTCGCGCCATGCACACCGAACTCAT
GGGCAAAGCCTCCCATGACGCTCTTCTCAACATCGAGCCCAACCACAGAC
CATTCGTCTTGACTCGCAGTGCCACTGCAGGTACAATGCGCTACGCTGCC
AGCACCTGGAGCGGAGACAACGTTACTAGCTGGGAGGGCATGAAGGGAGC
GAATGCTCTGTCCCTCAGCGCAGGTATCTCTCTTCTACAGTGCTGCGGTC
ACGATATCGGAGGATTCGAGGGACCTCAGCCCTCTCCTGAGCTGCTGCTC
AGATGGATTCAACTGGGTATTCACTCGCCTCGTTTTGCCATCAACTGCTT
CAAGACGTCTCCTGGGAACAGCTCCGTCGGAGACGTTATCGAGCCGTGGA
TGTACCCCGAGATCACCCCTCTCGTTCGGGATACAATCAAGCGTCGTTAC
GAGATCCTCCCCTATATCTACTCTCTCGGTCTGGAAAGCCATCTGACCGC
ATCCCCGCCCCAGCGCTGGGTAGGATGGGGCTACGAATCTGACCCGGAGG
TATGGACCAAGGCCCTGAAGTCCGGCGATGAGCAGTTCTGGTTCGGTGAC
ACCATCATGGTCGGCGGTGTCTACGAGCCAGGTGTGAGCGTTGCCAAGTT
ATACCTTCCCCGTAAGGCGAATGACCAGTTCGACTTCGGGTACGTGAACA
TGAACGAGCCTTATAACTACCTCGCCTCCGGACAATGGGTGGAAGTGCCC
TCCGAATGGAGGAAGAGCATTCCCCTTCTGGCCAGAATCGGCGGTGCTAT
CCCCGTCGGAAAACCCGTTCATACCAGGGTACCTGGCGATGATACCCCGG
CTTCTGTGGCTGTGAAAGAAGTCGATGATTACCGTGGAGTCGAAATCTTC
CCGCCTCTTGGCAGTTCTCATGGCCAGGTTTTCAGTACTACTTGGTTTGA
AGACGATGGTATTTCGCTTGAGGCTCGCATCTCGGAGTACACTGTCACCT
ATAGCTCCACGGAGGAGAAGGTCATTGTTGGATTTTCTCGTGATGAGAAG
TCTGGATTCGTCCCTGCTTGGACAGACCTTGATATAATCCTTCATAATGG
TGATGAGAGACGCGTTGTGTCGGATATTGGAAAGACTGTGGAGTATAAGG
GTAAGGGCTCCCGGGGACGGGTGGTTTATACCTTGAAGAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011115CBS51388_011115Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011115-T1.exon1CBS51388_011115-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011115-T1.cdsCBS51388_011115-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011115-T1CBS51388_011115-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH31
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR000322
DBxrefInterPro:IPR025887
DBxrefPFAM:PF01055
DBxrefPFAM:PF13802
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1272100..1274643 +
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