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CBS51388_011116-T1, CBS51388_011116-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011116-T1
Unique NameCBS51388_011116-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1275100..1276355-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011116-T1 ID=CBS51388_011116-T1|Name=CBS51388_011116-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1256bp|location=Sequence derived from alignment at An18:1275100..1276355- (Aspergillus niger CBS 513.88)
ATGATTGTTCGGCAACTTGTGCGGCAAAGTGAGTTACTCCATGGATTGGG
TTTATTGATAGGAAATATTGATGCTGATTCCCCCGTCCCCATCTAGGCCG
CCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTT
CCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAA
GCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGG
TACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGTAAGT
ACCGCAATATTCTAGCTGTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAA
TATACATCCTCTGGTTCAGGAGTCAAATTCCACAGTCTCGGTAGCGATGT
GACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCA
CCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACAC
TCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAG
GGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCC
GTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTC
TTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGA
ATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGA
CCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGC
TTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCG
TGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTG
TCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATC
GACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGA
CGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAG
GAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTG
ACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCT
AGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCT
CTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGAC
GAATAG
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Coding sequence (CDS) from alignment at An18:1275100..1276355-

>CBS51388_011116-T1 ID=CBS51388_011116-T1|Name=CBS51388_011116-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3339bp|location=Sequence derived from alignment at An18:1275100..1276355- (Aspergillus niger CBS 513.88)
GAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCA
GAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAAT
GCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACC
CCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATC
TCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGA
GGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGG
GACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCAC
ATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTT
GGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATG
ATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTT
GTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGG
TCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCCTA
CCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTG
ACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAG
AAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGC
CACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAG
AAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGA
GAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAGGCCGCCAGCTTCG
GGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGA
CGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAA
TTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGG
TGCACAAGAGAGATTGGATCCGAACACGCTCCGCCATGATTGTTCGGCAA
CTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGG
CGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACG
TTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACT
TCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGG
AACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGG
CCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCG
GGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGC
TCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATG
GCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGAT
GAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACT
TAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGT
TGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATCGACACC
GACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGACGACAG
TTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAG
TGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTAT
GAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGAC
CGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGG
GAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
GCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTC
TCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGA
GCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGC
CTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCAT
GATTGTTCGGCAACTTGTGCGGCAAAGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCAT
CTTGTCCCGATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGA
CTATCGTTGCGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTT
GCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAA
CACGCTCCGCCATGATTGTTCGGCAACTTGTGCGGCAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011116CBS51388_011116Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011116-T1CBS51388_011116-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011116-T1.cdsCBS51388_011116-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011116-T1.exon3CBS51388_011116-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011116-T1.exon2CBS51388_011116-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011116-T1.exon1CBS51388_011116-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263J7D
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR005706
DBxrefInterPro:IPR001865
DBxrefPFAM:PF00318
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1275100..1276355 -
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