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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1278113..1278768- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011117-T1 ID=CBS51388_011117-T1|Name=CBS51388_011117-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=656bp|location=Sequence derived from alignment at An18:1278113..1278768- (Aspergillus niger CBS 513.88)
ATGTCTGGCTACGACGGATACAACAACCAAGGCTACTACGGCCACCAGCA
GCAGGGTGGTTACAACCAGGGTGGCTACGGCCAAGGTGGATACGGTCAGG
GCGGATACCCCCAGCAGCAAGGATACGGCCAGCAGGGTGGCTACGACCAA
TACAACCAGCACCAGCAGCACGGCGGCCAGGGTGGTGGTGCCTCTAGCGA
CTACTACGGCGGTGGTGGACAGTCCCAGTATGGTGAGAGCCAGTACGGCC
AGCAGCACCAGGGTGGTCAGCAGTACGGCCAGGACCAGCACGGCGAGTAT
GTTATTCACTAATACTGATACTTATTATGATCTCTAGCTAACATCTTGTC
TCTAGATACAACCAGGGTGCCCCCGGCGGAGCCCAGGAGGGTGAGCGTGG
TCTCGGTGGTGCCATTGCCGGTGGTCTGGCGGGCGGATTTGCCGGTCACA
AGGCCGATCACGGAATCCTCGGAACCATCGGTGGAGCTATCATGGGAAGC
ATCGCCGAGGATGCCATCAAGAAGCACAAGCACAAGGACGAGCAGCAGCA
GGACTACCAGAGCGGCTATGGCGGTTACCCCCCTCAGGGTGGCTCTCAGT
CCCACCACAGCGGTGGTGGCATGATGGACCAGCTCGGCGGCTTCTTCAAG
CGATAG back to topCoding sequence (CDS) from alignment at An18:1278113..1278768- >CBS51388_011117-T1 ID=CBS51388_011117-T1|Name=CBS51388_011117-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1194bp|location=Sequence derived from alignment at An18:1278113..1278768- (Aspergillus niger CBS 513.88)
ATACAACCAGGGTGCCCCCGGCGGAGCCCAGGAGGGTGAGCGTGGTCTCG
GTGGTGCCATTGCCGGTGGTCTGGCGGGCGGATTTGCCGGTCACAAGGCC
GATCACGGAATCCTCGGAACCATCGGTGGAGCTATCATGGGAAGCATCGC
CGAGGATGCCATCAAGAAGCACAAGCACAAGGACGAGCAGCAGCAGGACT
ACCAGAGCGGCTATGGCGGTTACCCCCCTCAGGGTGGCTCTCAGTCCCAC
CACAGCGGTGGTGGCATGATGGACCAGCTCGGCGGCTTCTTCAAGCGATA
GATGTCTGGCTACGACGGATACAACAACCAAGGCTACTACGGCCACCAGC
AGCAGGGTGGTTACAACCAGGGTGGCTACGGCCAAGGTGGATACGGTCAG
GGCGGATACCCCCAGCAGCAAGGATACGGCCAGCAGGGTGGCTACGACCA
ATACAACCAGCACCAGCAGCACGGCGGCCAGGGTGGTGGTGCCTCTAGCG
ACTACTACGGCGGTGGTGGACAGTCCCAGTATGGTGAGAGCCAGTACGGC
CAGCAGCACCAGGGTGGTCAGCAGTACGGCCAGGACCAGCACGGCGAATA
CAACCAGGGTGCCCCCGGCGGAGCCCAGGAGGGTGAGCGTGGTCTCGGTG
GTGCCATTGCCGGTGGTCTGGCGGGCGGATTTGCCGGTCACAAGGCCGAT
CACGGAATCCTCGGAACCATCGGTGGAGCTATCATGGGAAGCATCGCCGA
GGATGCCATCAAGAAGCACAAGCACAAGGACGAGCAGCAGCAGGACTACC
AGAGCGGCTATGGCGGTTACCCCCCTCAGGGTGGCTCTCAGTCCCACCAC
AGCGGTGGTGGCATGATGGACCAGCTCGGCGGCTTCTTCAAGCGATAGAT
GTCTGGCTACGACGGATACAACAACCAAGGCTACTACGGCCACCAGCAGC
AGGGTGGTTACAACCAGGGTGGCTACGGCCAAGGTGGATACGGTCAGGGC
GGATACCCCCAGCAGCAAGGATACGGCCAGCAGGGTGGCTACGACCAATA
CAACCAGCACCAGCAGCACGGCGGCCAGGGTGGTGGTGCCTCTAGCGACT
ACTACGGCGGTGGTGGACAGTCCCAGTATGGTGAGAGCCAGTACGGCCAG
CAGCACCAGGGTGGTCAGCAGTACGGCCAGGACCAGCACGGCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0019867 | outer membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008816 |
| DBxref | PFAM:PF05433 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1278113..1278768 - |
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