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CBS51388_011120-T1, CBS51388_011120-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011120-T1
Unique NameCBS51388_011120-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1286667..1287556-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011120-T1 ID=CBS51388_011120-T1|Name=CBS51388_011120-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=890bp|location=Sequence derived from alignment at An18:1286667..1287556- (Aspergillus niger CBS 513.88)
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCGTAAGTCGCCCCATCCAGCTTC
GAGTCAGGTCTGCCTCGGTGCATATCATCATCAGGATTTCAAGGGGGCCA
TCTGAGCCTGTCTATCGCTTTTCATCAGTCTATGGAGGATTGTTCTGTCT
CAATGGATCTGCGGCTGATGAGCTGGTCGTCTAGTTACACTATCTTCTAC
CCCTTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCT
GCGTCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTG
AGGCTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAG
GATGGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCAT
CTACTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGA
GTGAGTAACCAGTAAATTCATGTGTAGGTCATGAGACTCCTACTAACGAT
ATTACGTAGCTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTG
CTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGA
AATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAA
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Coding sequence (CDS) from alignment at An18:1286667..1287556-

>CBS51388_011120-T1 ID=CBS51388_011120-T1|Name=CBS51388_011120-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2025bp|location=Sequence derived from alignment at An18:1286667..1287556- (Aspergillus niger CBS 513.88)
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCCCTTCCAACGCCGAATATGCCACCGA
GACCCGTGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTG
ACAAGTGGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTAC
CGCTAATTACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCC
GTTTCCGTGGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGT
TGCATTGCCTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCAC
CATCGAGGCTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACG
ATATCGACATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGC
CCTGTCGACGCTATTGTTGAGAATGGCCGCCCCCAAGTCCGTCGCCAGGC
TCGTCGCCTACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCCTTG
GGATCCATCGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCCAGC
TGGTCCCCCCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGGACG
AAGGTGCTGAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATGGCT
GAGTTGTTGCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACCTCC
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016651oxidoreductase activity, acting on NAD(P)H
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011120CBS51388_011120Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011120-T1CBS51388_011120-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011120-T1.cdsCBS51388_011120-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011120-T1.exon3CBS51388_011120-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011120-T1.exon2CBS51388_011120-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011120-T1.exon1CBS51388_011120-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR017900
DBxrefInterPro:IPR017896
DBxrefInterPro:IPR010226
DBxrefPFAM:PF13187
DBxrefPFAM:PF12838
DBxrefPFAM:PF12800
DBxrefPFAM:PF13237
DBxrefPFAM:PF00037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1286667..1287556 -
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