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CBS51388_011129-T1, CBS51388_011129-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011129-T1
Unique NameCBS51388_011129-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1311009..1312294+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011129-T1 ID=CBS51388_011129-T1|Name=CBS51388_011129-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1286bp|location=Sequence derived from alignment at An18:1311009..1312294+ (Aspergillus niger CBS 513.88)
ATGGTCCGCCATAAAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTC
CTCCAAGGGTCCCCGTCCTCCCCGCCGCGATCCCGCCGACCCTGACGCCG
ATGATGCCGACCGCCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGAT
CTGGGTCACTGTGATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTT
TGGTCTGATGCGCGAGCTGCAGATTGGTCAGCGATTCCCAGGTGTAATTG
TCTCGTACGTTTTTCACCCATCCTTACCTACACAATACTCACAGAGGCAA
CCCCAAAAGCTAACATCTATATCACACCTGTCCAGTCCCAACGCAAAGAA
AATCATCTCCCCCGCTGACAAAGACCTCCTCGAACAATTCGGCGCCGCAG
TAGTAGAATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCGCGGATC
GGAGGCAAATGCGAACGACTCCGTAAGCCCTCAAACCCTTAACAACCCAA
ACCTCCAACAACACTAACAAACTATCTTGGAATAAAATAGTACCCTACCT
CATCGCCGCCAACACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGCG
TCGAAGCGCTAGCCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGCC
CGCCAAGTCCTGAAACCCTTCCGCTACGGCGAAGCCTTCCTAGAAATCAA
CGGGAAACTACTTAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATCA
AGCGCGCCGAGGAGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGAG
AGTCGGGCCGCGGGCGGCGCAGATATCTGGACAGTGGGAAATACGAATCG
GAGGGTGGAGTCGGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAGG
AGAACAACGATGAGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGCG
ATATCAGACGACTCCGAAGAAGAAGAACAAATGGCCGCTATTCGCGCCAA
GATCCTGAATTCCAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCGC
AGCCGGAGAAGATTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACCG
TTGGAGGATTCGGATGCCGAGTCCGGGTCCGCGGAGGGTAGTGAGGATGA
GGCGTTCGATAGTATCATCAATGCGACGCCGGTGACGGATCGGATGGGGA
TTATTGCGGCGCAGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTTT
TCGAGGACGGTCGTGGATGCGCCGAAGAGGTGGTAA
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Coding sequence (CDS) from alignment at An18:1311009..1312294+

>CBS51388_011129-T1 ID=CBS51388_011129-T1|Name=CBS51388_011129-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3411bp|location=Sequence derived from alignment at An18:1311009..1312294+ (Aspergillus niger CBS 513.88)
ATGGTCCGCCATAAAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTC
CTCCAAGGGTCCCCGTCCTCCCCGCCGCGATCCCGCCGACCCTGACGCCG
ATGATGCCGACCGCCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGAT
CTGGGTCACTGTGATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTT
TGGTCTGATGCGCGAGCTGCAGATTGGTCAGCGATTCCCAGGTGTAATTG
TCTCTCCCAACGCAAAGAAAATCATCTCCCCCGCTGACAAAGACCTCCTC
GAACAATTCGGCGCCGCAGTAGTAGAATGTTCCTGGGTGCGAGTGAAGGA
AGTTCCCTGGTCGCGGATCGGAGGCAAATGCGAACGACTCCTACCCTACC
TCATCGCCGCCAACACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGC
GTCGAAGCGCTAGCCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGC
CCGCCAAGTCCTGAAACCCTTCCGCTACGGCGAAGCCTTCCTAGAAATCA
ACGGGAAACTACTTAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATC
AAGCGCGCCGAGGAGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGA
GAGTCGGGCCGCGGGCGGCGCAGATATCTGGACAGTGGGAAATACGAATC
GGAGGGTGGAGTCGGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAG
GAGAACAACGATGAGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGC
GATATCAGACGACTCCGAAGAAGAAGAACAAATGGCCGCTATTCGCGCCA
AGATCCTGAATTCCAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCG
CAGCCGGAGAAGATTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACC
GTTGGAGGATTCGGATGCCGAGTCCGGGTCCGCGGAGGGTAGTGAGGATG
AGGCGTTCGATAGTATCATCAATGCGACGCCGGTGACGGATCGGATGGGG
ATTATTGCGGCGCAGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTT
TTCGAGGACGGTCGTGGATGCGCCGAAGAGGTGGTAAATGGTCCGCCATA
AAAAGGACAACTTCGCTCGAGGAGGCAAGAAATTCTCCTCCAAGGGTCCC
CGTCCTCCCCGCCGCGATCCCGCCGACCCTGACGCCGATGATGCCGACCG
CCCCTCCAGACCTCCCTTCAAAGCCGCCTGCTGGGATCTGGGTCACTGTG
ATCCCAAGCGCTGCTCAGGAAAGAGGTTGATGAACTTTGGTCTGATGCGC
GAGCTGCAGATTGGTCAGCGATTCCCAGGTGTAATTGTCTCTCCCAACGC
AAAGAAAATCATCTCCCCCGCTGACAAAGACCTCCTCGAACAATTCGGCG
CCGCAGTAGTAGAATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCG
CGGATCGGAGGCAAATGCGAACGACTCCTACCCTACCTCATCGCCGCCAA
CACAGTCAACTACGGCAAACCCTGGCGTCTAAACTGCGTCGAAGCGCTAG
CCGCCTGTTTCTGCATCTGCGGCCACGAAGACTGGGCCCGCCAAGTCCTG
AAACCCTTCCGCTACGGCGAAGCCTTCCTAGAAATCAACGGGAAACTACT
TAAGCGGTACGCCGCGTGCGCCGACGAAGACGAAATCAAGCGCGCCGAGG
AGGAATGGCTGGCCAAGATCGAGCGCGAATATGAGGAGAGTCGGGCCGCG
GGCGGCGCAGATATCTGGACAGTGGGAAATACGAATCGGAGGGTGGAGTC
GGATTCCGATGACGATGATGAGGAGGGCTCTGGCAAGGAGAACAACGATG
AGGAAGAAGAGGAAGAGGAAGATAAAGACCCCTTCGCGATATCAGACGAC
TCCGAAGAAGAAGAACAAATGGCCGCTATTCGCGCCAAGATCCTGAATTC
CAAATCGTTTCAGAACCCCTCTGCCTCGGATAAGCCGCAGCCGGAGAAGA
TTGCTCGGCCGGAGGAGGAAGGGTCCAAGTCGAGACCGTTGGAGGATTCG
GATGCCGAGTCCGGGTCCGCGGAGGGTAGTGAGGATGAGGCGTTCGATAG
TATCATCAATGCGACGCCGGTGACGGATCGGATGGGGATTATTGCGGCGC
AGAAGAAGAAGGAGAAGGAGACATTTAGTGCGTCGTTTTCGAGGACGGTC
GTGGATGCGCCGAAGAGGTGGTAAATGGTCCGCCATAAAAAGGACAACTT
CGCTCGAGGAGGCAAGAAATTCTCCTCCAAGGGTCCCCGTCCTCCCCGCC
GCGATCCCGCCGACCCTGACGCCGATGATGCCGACCGCCCCTCCAGACCT
CCCTTCAAAGCCGCCTGCTGGGATCTGGGTCACTGTGATCCCAAGCGCTG
CTCAGGAAAGAGGTTGATGAACTTTGGTCTGATGCGCGAGCTGCAGATTG
GTCAGCGATTCCCAGGTGTAATTGTCTCTCCCAACGCAAAGAAAATCATC
TCCCCCGCTGACAAAGACCTCCTCGAACAATTCGGCGCCGCAGTAGTAGA
ATGTTCCTGGGTGCGAGTGAAGGAAGTTCCCTGGTCGCGGATCGGAGGCA
AATGCGAACGACTCCTACCCTACCTCATCGCCGCCAACACAGTCAACTAC
GGCAAACCCTGGCGTCTAAACTGCGTCGAAGCGCTAGCCGCCTGTTTCTG
CATCTGCGGCCACGAAGACTGGGCCCGCCAAGTCCTGAAACCCTTCCGCT
ACGGCGAAGCCTTCCTAGAAATCAACGGGAAACTACTTAAGCGGTACGCC
GCGTGCGCCGACGAAGACGAAATCAAGCGCGCCGAGGAGGAATGGCTGGC
CAAGATCGAGCGCGAATATGAGGAGAGTCGGGCCGCGGGCGGCGCAGATA
TCTGGACAGTGGGAAATACGAATCGGAGGGTGGAGTCGGATTCCGATGAC
GATGATGAGGAGGGCTCTGGCAAGGAGAACAACGATGAGGAAGAAGAGGA
AGAGGAAGATAAAGACCCCTTCGCGATATCAGACGACTCCGAAGAAGAAG
AACAAATGGCCGCTATTCGCGCCAAGATCCTGAATTCCAAATCGTTTCAG
AACCCCTCTGCCTCGGATAAGCCGCAGCCGGAGAAGATTGCTCGGCCGGA
GGAGGAAGGGTCCAAGTCGAGACCGTTGGAGGATTCGGATGCCGAGTCCG
GGTCCGCGGAGGGTAGTGAGGATGAGGCGTTCGATAGTATCATCAATGCG
ACGCCGGTGACGGATCGGATGGGGATTATTGCGGCGCAGAAGAAGAAGGA
GAAGGAGACATTTAGTGCGTCGTTTTCGAGGACGGTCGTGGATGCGCCGA
AGAGGTGGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011129CBS51388_011129Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011129-T1.exon1CBS51388_011129-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011129-T1.exon2CBS51388_011129-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011129-T1.exon3CBS51388_011129-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011129-T1.cdsCBS51388_011129-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011129-T1CBS51388_011129-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092656RK
DBxrefInterPro:IPR022968
DBxrefInterPro:IPR007209
DBxrefInterPro:IPR007177
DBxrefPFAM:PF04068
DBxrefPFAM:PF04034
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1311009..1312294 +
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